mRNA_Ecto-sp13_S_contig67244.17623.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig67244.17623.1 vs. uniprot
Match: D7FMT8_ECTSI (Oxa1-like homolog, mitochondrial inner membrane insertase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMT8_ECTSI) HSP 1 Score: 131 bits (330), Expect = 1.310e-36 Identity = 62/63 (98.41%), Postives = 63/63 (100.00%), Query Frame = 1
Query: 1 VMGGVQSGVQAVHHTTGLPWWATIAVATIGVKVSLLPVVVYQAGHMDRMRAAWPEIQILRGYL 189
VMGGVQSGVQAVHHTTGLPWWATIAVATIGVK+SLLPVVVYQAGHMDRMRAAWPEIQILRGYL
Sbjct: 3 VMGGVQSGVQAVHHTTGLPWWATIAVATIGVKISLLPVVVYQAGHMDRMRAAWPEIQILRGYL 65
BLAST of mRNA_Ecto-sp13_S_contig67244.17623.1 vs. uniprot
Match: A0A6H5JKU0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKU0_9PHAE) HSP 1 Score: 128 bits (321), Expect = 9.360e-35 Identity = 60/63 (95.24%), Postives = 62/63 (98.41%), Query Frame = 1
Query: 1 VMGGVQSGVQAVHHTTGLPWWATIAVATIGVKVSLLPVVVYQAGHMDRMRAAWPEIQILRGYL 189
V+GGVQSGVQAVHHTTGLPWWATIAVATIGVK+SLLPVVVYQAGHMDRMRAAWPEIQILR YL
Sbjct: 14 VLGGVQSGVQAVHHTTGLPWWATIAVATIGVKISLLPVVVYQAGHMDRMRAAWPEIQILRSYL 76
BLAST of mRNA_Ecto-sp13_S_contig67244.17623.1 vs. uniprot
Match: W1QDD0_OGAPD (Mitochondrial inner membrane protein OXA1 n=5 Tax=Ogataea TaxID=461281 RepID=W1QDD0_OGAPD) HSP 1 Score: 64.7 bits (156), Expect = 1.120e-10 Identity = 28/56 (50.00%), Postives = 42/56 (75.00%), Query Frame = 1
Query: 13 VQSGVQAVHHTTGLPWWATIAVATIGVKVSLLPVVVYQAGHMDRMRAAWPEIQILR 180
+Q+ ++AVH TTGLPWWATIA T+G++ +LLP+ + + M R +AA PE ++LR
Sbjct: 85 IQTTLEAVHVTTGLPWWATIAATTLGIRFALLPLFMASSDAMARSQAAAPETKVLR 140
BLAST of mRNA_Ecto-sp13_S_contig67244.17623.1 vs. uniprot
Match: UPI001DB4B477 (uncharacterized protein n=1 Tax=Ogataea philodendri TaxID=1378263 RepID=UPI001DB4B477) HSP 1 Score: 63.2 bits (152), Expect = 3.960e-10 Identity = 27/56 (48.21%), Postives = 41/56 (73.21%), Query Frame = 1
Query: 13 VQSGVQAVHHTTGLPWWATIAVATIGVKVSLLPVVVYQAGHMDRMRAAWPEIQILR 180
+Q+ ++AVH TTGLPWWATIA TIG++++ P+ + + M R +AA PE ++LR
Sbjct: 83 IQTALEAVHVTTGLPWWATIAATTIGLRLAFFPLFMSSSDAMARSQAAAPETKVLR 138
BLAST of mRNA_Ecto-sp13_S_contig67244.17623.1 vs. uniprot
Match: A0A6G0WN15_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WN15_9STRA) HSP 1 Score: 59.7 bits (143), Expect = 4.790e-9 Identity = 26/64 (40.62%), Postives = 43/64 (67.19%), Query Frame = 1
Query: 1 VMGGVQSGVQAVHHTTGLPWWATIAVATIGVKVSLLPVVVYQAGHMDRMRAAWPEIQ-ILRGYL 189
++ Q ++AVH TTGLPWWAT+ + + V+ +L P++VYQ +RM A+ PE++ + + YL
Sbjct: 2 IVDAAQKVIEAVHTTTGLPWWATLGLTAVAVRGTLFPLLVYQIKATERMAASAPEMRNVWKAYL 65
BLAST of mRNA_Ecto-sp13_S_contig67244.17623.1 vs. uniprot
Match: A0A6A3NZB6_9STRA (Uncharacterized protein n=1 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A3NZB6_9STRA) HSP 1 Score: 55.5 bits (132), Expect = 1.340e-8 Identity = 25/59 (42.37%), Postives = 38/59 (64.41%), Query Frame = 1
Query: 1 VMGGVQSGVQAVHHTTGLPWWATIAVATIGVKVSLLPVVVYQAGHMDRMRAAWPEIQIL 177
++ GVQS ++AVH TTGLPWWAT+ + + V+ ++LP V+ M R+ A P+ L
Sbjct: 15 ILQGVQSVLEAVHTTTGLPWWATLMFSGMTVRAAILPFYVFHIQAMQRLMQARPDFSKL 73
BLAST of mRNA_Ecto-sp13_S_contig67244.17623.1 vs. uniprot
Match: A0A8K1FF33_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FF33_PYTOL) HSP 1 Score: 58.5 bits (140), Expect = 1.750e-8 Identity = 25/52 (48.08%), Postives = 35/52 (67.31%), Query Frame = 1
Query: 25 VQAVHHTTGLPWWATIAVATIGVKVSLLPVVVYQAGHMDRMRAAWPEIQILR 180
++AVH TTGLPWWATI T ++ +LLP+ + + DRM+A PE+ LR
Sbjct: 109 LEAVHITTGLPWWATIVATTFAIRTALLPLTIKSLRNADRMKAFQPEMDKLR 160
BLAST of mRNA_Ecto-sp13_S_contig67244.17623.1 vs. uniprot
Match: A0A6A3K1K8_9STRA (Uncharacterized protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A6A3K1K8_9STRA) HSP 1 Score: 58.2 bits (139), Expect = 2.380e-8 Identity = 25/59 (42.37%), Postives = 39/59 (66.10%), Query Frame = 1
Query: 1 VMGGVQSGVQAVHHTTGLPWWATIAVATIGVKVSLLPVVVYQAGHMDRMRAAWPEIQIL 177
++ GVQS ++AVH TTGLPWWAT+ ++ + V+ ++ P V+Q M R+ A P+ L
Sbjct: 87 IVQGVQSALEAVHTTTGLPWWATLMLSGVTVRAAIFPFYVFQIQAMQRLMQARPDFSKL 145
BLAST of mRNA_Ecto-sp13_S_contig67244.17623.1 vs. uniprot
Match: I4YHJ9_WALMC (Uncharacterized protein n=3 Tax=Wallemia mellicola TaxID=1708541 RepID=I4YHJ9_WALMC) HSP 1 Score: 58.2 bits (139), Expect = 2.470e-8 Identity = 26/55 (47.27%), Postives = 37/55 (67.27%), Query Frame = 1
Query: 7 GGVQSGVQAVHHTTGLPWWATIAVATIGVKVSLLPVVVYQAGHMDRMRAAWPEIQ 171
G VQ ++AVH +TGLPWWATIAV T+ ++++L P++ H RM PE+Q
Sbjct: 104 GFVQQALEAVHVSTGLPWWATIAVTTVSLRLALFPLLRNSLIHTSRMAVHQPEMQ 158
BLAST of mRNA_Ecto-sp13_S_contig67244.17623.1 vs. uniprot
Match: A0A4T0FWJ1_9BASI (Uncharacterized protein n=1 Tax=Wallemia hederae TaxID=1540922 RepID=A0A4T0FWJ1_9BASI) HSP 1 Score: 58.2 bits (139), Expect = 2.470e-8 Identity = 26/55 (47.27%), Postives = 37/55 (67.27%), Query Frame = 1
Query: 7 GGVQSGVQAVHHTTGLPWWATIAVATIGVKVSLLPVVVYQAGHMDRMRAAWPEIQ 171
G VQ ++AVH +TGLPWWATIAV T+ ++++L P++ H RM PE+Q
Sbjct: 109 GFVQQALEAVHVSTGLPWWATIAVTTVSLRLALFPLLRNSLIHTSRMAVHQPEMQ 163 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig67244.17623.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig67244.17623.1 >prot_Ecto-sp13_S_contig67244.17623.1 ID=prot_Ecto-sp13_S_contig67244.17623.1|Name=mRNA_Ecto-sp13_S_contig67244.17623.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=62bp MGGVQSGVQAVHHTTGLPWWATIAVATIGVKVSLLPVVVYQAGHMDRMRAback to top mRNA from alignment at Ecto-sp13_S_contig67244:515..703- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig67244.17623.1 ID=mRNA_Ecto-sp13_S_contig67244.17623.1|Name=mRNA_Ecto-sp13_S_contig67244.17623.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=189bp|location=Sequence derived from alignment at Ecto-sp13_S_contig67244:515..703- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig67244:515..703- >mRNA_Ecto-sp13_S_contig67244.17623.1 ID=mRNA_Ecto-sp13_S_contig67244.17623.1|Name=mRNA_Ecto-sp13_S_contig67244.17623.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=186bp|location=Sequence derived from alignment at Ecto-sp13_S_contig67244:515..703- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |