prot_Ecto-sp13_S_contig67244.17623.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig67244.17623.1
Unique Nameprot_Ecto-sp13_S_contig67244.17623.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length62
Homology
BLAST of mRNA_Ecto-sp13_S_contig67244.17623.1 vs. uniprot
Match: D7FMT8_ECTSI (Oxa1-like homolog, mitochondrial inner membrane insertase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMT8_ECTSI)

HSP 1 Score: 129 bits (325), Expect = 7.070e-36
Identity = 61/62 (98.39%), Postives = 62/62 (100.00%), Query Frame = 0
Query:    1 MGGVQSGVQAVHHTTGLPWWATIAVATIGVKVSLLPVVVYQAGHMDRMRAAWPEIQILRGYL 62
            MGGVQSGVQAVHHTTGLPWWATIAVATIGVK+SLLPVVVYQAGHMDRMRAAWPEIQILRGYL
Sbjct:    4 MGGVQSGVQAVHHTTGLPWWATIAVATIGVKISLLPVVVYQAGHMDRMRAAWPEIQILRGYL 65          
BLAST of mRNA_Ecto-sp13_S_contig67244.17623.1 vs. uniprot
Match: A0A6H5JKU0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKU0_9PHAE)

HSP 1 Score: 126 bits (316), Expect = 4.980e-34
Identity = 59/62 (95.16%), Postives = 61/62 (98.39%), Query Frame = 0
Query:    1 MGGVQSGVQAVHHTTGLPWWATIAVATIGVKVSLLPVVVYQAGHMDRMRAAWPEIQILRGYL 62
            +GGVQSGVQAVHHTTGLPWWATIAVATIGVK+SLLPVVVYQAGHMDRMRAAWPEIQILR YL
Sbjct:   15 LGGVQSGVQAVHHTTGLPWWATIAVATIGVKISLLPVVVYQAGHMDRMRAAWPEIQILRSYL 76          
BLAST of mRNA_Ecto-sp13_S_contig67244.17623.1 vs. uniprot
Match: W1QDD0_OGAPD (Mitochondrial inner membrane protein OXA1 n=5 Tax=Ogataea TaxID=461281 RepID=W1QDD0_OGAPD)

HSP 1 Score: 64.7 bits (156), Expect = 1.080e-10
Identity = 28/56 (50.00%), Postives = 42/56 (75.00%), Query Frame = 0
Query:    4 VQSGVQAVHHTTGLPWWATIAVATIGVKVSLLPVVVYQAGHMDRMRAAWPEIQILR 59
            +Q+ ++AVH TTGLPWWATIA  T+G++ +LLP+ +  +  M R +AA PE ++LR
Sbjct:   85 IQTTLEAVHVTTGLPWWATIAATTLGIRFALLPLFMASSDAMARSQAAAPETKVLR 140          
BLAST of mRNA_Ecto-sp13_S_contig67244.17623.1 vs. uniprot
Match: UPI001DB4B477 (uncharacterized protein n=1 Tax=Ogataea philodendri TaxID=1378263 RepID=UPI001DB4B477)

HSP 1 Score: 63.2 bits (152), Expect = 3.800e-10
Identity = 27/56 (48.21%), Postives = 41/56 (73.21%), Query Frame = 0
Query:    4 VQSGVQAVHHTTGLPWWATIAVATIGVKVSLLPVVVYQAGHMDRMRAAWPEIQILR 59
            +Q+ ++AVH TTGLPWWATIA  TIG++++  P+ +  +  M R +AA PE ++LR
Sbjct:   83 IQTALEAVHVTTGLPWWATIAATTIGLRLAFFPLFMSSSDAMARSQAAAPETKVLR 138          
BLAST of mRNA_Ecto-sp13_S_contig67244.17623.1 vs. uniprot
Match: A0A6G0WN15_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WN15_9STRA)

HSP 1 Score: 58.9 bits (141), Expect = 8.830e-9
Identity = 26/59 (44.07%), Postives = 41/59 (69.49%), Query Frame = 0
Query:    5 QSGVQAVHHTTGLPWWATIAVATIGVKVSLLPVVVYQAGHMDRMRAAWPEIQ-ILRGYL 62
            Q  ++AVH TTGLPWWAT+ +  + V+ +L P++VYQ    +RM A+ PE++ + + YL
Sbjct:    7 QKVIEAVHTTTGLPWWATLGLTAVAVRGTLFPLLVYQIKATERMAASAPEMRNVWKAYL 65          
BLAST of mRNA_Ecto-sp13_S_contig67244.17623.1 vs. uniprot
Match: A0A8K1FF33_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FF33_PYTOL)

HSP 1 Score: 58.5 bits (140), Expect = 1.680e-8
Identity = 25/52 (48.08%), Postives = 35/52 (67.31%), Query Frame = 0
Query:    8 VQAVHHTTGLPWWATIAVATIGVKVSLLPVVVYQAGHMDRMRAAWPEIQILR 59
            ++AVH TTGLPWWATI   T  ++ +LLP+ +    + DRM+A  PE+  LR
Sbjct:  109 LEAVHITTGLPWWATIVATTFAIRTALLPLTIKSLRNADRMKAFQPEMDKLR 160          
BLAST of mRNA_Ecto-sp13_S_contig67244.17623.1 vs. uniprot
Match: A0A2D4CAA6_PYTIN (Mitochondrial inner membrane protein OXA1 n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CAA6_PYTIN)

HSP 1 Score: 58.2 bits (139), Expect = 2.400e-8
Identity = 25/52 (48.08%), Postives = 36/52 (69.23%), Query Frame = 0
Query:    8 VQAVHHTTGLPWWATIAVATIGVKVSLLPVVVYQAGHMDRMRAAWPEIQILR 59
            ++AVH TTGLPWWATI   T  ++ +LLPV V    + ++M+A  PE++ LR
Sbjct:  615 LEAVHVTTGLPWWATIVATTFAIRTALLPVTVKSLRNSEKMKAFQPEMEKLR 666          
BLAST of mRNA_Ecto-sp13_S_contig67244.17623.1 vs. uniprot
Match: I4YHJ9_WALMC (Uncharacterized protein n=3 Tax=Wallemia mellicola TaxID=1708541 RepID=I4YHJ9_WALMC)

HSP 1 Score: 57.8 bits (138), Expect = 3.240e-8
Identity = 26/55 (47.27%), Postives = 37/55 (67.27%), Query Frame = 0
Query:    2 GGVQSGVQAVHHTTGLPWWATIAVATIGVKVSLLPVVVYQAGHMDRMRAAWPEIQ 56
            G VQ  ++AVH +TGLPWWATIAV T+ ++++L P++     H  RM    PE+Q
Sbjct:  104 GFVQQALEAVHVSTGLPWWATIAVTTVSLRLALFPLLRNSLIHTSRMAVHQPEMQ 158          
BLAST of mRNA_Ecto-sp13_S_contig67244.17623.1 vs. uniprot
Match: A0A4T0FWJ1_9BASI (Uncharacterized protein n=1 Tax=Wallemia hederae TaxID=1540922 RepID=A0A4T0FWJ1_9BASI)

HSP 1 Score: 57.8 bits (138), Expect = 3.240e-8
Identity = 26/55 (47.27%), Postives = 37/55 (67.27%), Query Frame = 0
Query:    2 GGVQSGVQAVHHTTGLPWWATIAVATIGVKVSLLPVVVYQAGHMDRMRAAWPEIQ 56
            G VQ  ++AVH +TGLPWWATIAV T+ ++++L P++     H  RM    PE+Q
Sbjct:  109 GFVQQALEAVHVSTGLPWWATIAVTTVSLRLALFPLLRNSLIHTSRMAVHQPEMQ 163          
BLAST of mRNA_Ecto-sp13_S_contig67244.17623.1 vs. uniprot
Match: R9AHA0_WALI9 (Uncharacterized protein n=1 Tax=Wallemia ichthyophaga (strain EXF-994 / CBS 113033) TaxID=1299270 RepID=R9AHA0_WALI9)

HSP 1 Score: 57.8 bits (138), Expect = 3.240e-8
Identity = 26/55 (47.27%), Postives = 37/55 (67.27%), Query Frame = 0
Query:    2 GGVQSGVQAVHHTTGLPWWATIAVATIGVKVSLLPVVVYQAGHMDRMRAAWPEIQ 56
            G VQ  ++AVH +TGLPWWATIAV T+ ++++L P++     H  RM    PE+Q
Sbjct:  113 GFVQQALEAVHVSTGLPWWATIAVTTVSLRMALFPLLRNSLIHTSRMAVHQPEMQ 167          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig67244.17623.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FMT8_ECTSI7.070e-3698.39Oxa1-like homolog, mitochondrial inner membrane in... [more]
A0A6H5JKU0_9PHAE4.980e-3495.16Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
W1QDD0_OGAPD1.080e-1050.00Mitochondrial inner membrane protein OXA1 n=5 Tax=... [more]
UPI001DB4B4773.800e-1048.21uncharacterized protein n=1 Tax=Ogataea philodendr... [more]
A0A6G0WN15_9STRA8.830e-944.07Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
A0A8K1FF33_PYTOL1.680e-848.08Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A2D4CAA6_PYTIN2.400e-848.08Mitochondrial inner membrane protein OXA1 n=1 Tax=... [more]
I4YHJ9_WALMC3.240e-847.27Uncharacterized protein n=3 Tax=Wallemia mellicola... [more]
A0A4T0FWJ1_9BASI3.240e-847.27Uncharacterized protein n=1 Tax=Wallemia hederae T... [more]
R9AHA0_WALI93.240e-847.27Uncharacterized protein n=1 Tax=Wallemia ichthyoph... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001708Membrane insertase YidC/ALB3/OXA1/COX18PANTHERPTHR12428OXA1coord: 3..58
NoneNo IPR availablePANTHERPTHR12428:SF34CYTOCHROME C OXIDASE ASSEMBLY PROTEIN COX18, MITOCHONDRIALcoord: 3..58
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 41..62
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..19
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 20..40
NoneNo IPR availableTMHMMTMhelixcoord: 20..42

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig67244contigEcto-sp13_S_contig67244:515..700 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig67244.17623.1mRNA_Ecto-sp13_S_contig67244.17623.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig67244 515..703 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig67244.17623.1 ID=prot_Ecto-sp13_S_contig67244.17623.1|Name=mRNA_Ecto-sp13_S_contig67244.17623.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=62bp
MGGVQSGVQAVHHTTGLPWWATIAVATIGVKVSLLPVVVYQAGHMDRMRA
AWPEIQILRGYL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001708YidC/ALB3/OXA1/COX18