mRNA_Ecto-sp13_S_contig6155.16851.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig6155.16851.1
Unique NamemRNA_Ecto-sp13_S_contig6155.16851.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig6155.16851.1 vs. uniprot
Match: D7FJ10_ECTSI (VPS37 C-terminal domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FJ10_ECTSI)

HSP 1 Score: 538 bits (1385), Expect = 6.670e-184
Identity = 281/305 (92.13%), Postives = 285/305 (93.44%), Query Frame = 2
Query:  833 PVLQLLSPVTHPWVNTYMQVVGHPDLHGWDGTNPPLIGDIVAAVIQEFGRSNGSVTTSGRDQASTVWGGPIAQQSSGFSGAPPAAGAFGLGNPPASHPVSGATGGAASAKGYTNMTSTSQRTGGEVQIRRARPPVHHTPIPDIPDTFSELQGLSTEKLNRLLGDESARQALLLGMTNVVRMKDLRTDVRKGNVETARLTLAKQDAASVLREEGEKIKAELKTLQTSYEDKAHGGGKNMGGTADQMILKRVKHASKMADTSSERVATDFLEKRVPTQDFLDEFLKERQRYHMLAAKIECMKRDIRF 1747
            PVLQLLSPVTHPWVNTYMQVVGHPDLHGWDGTNPPLIGDIVAAVIQEFGRSNG VTTSGR QASTVWGGPIAQ+    SG PPA GAFGLGNPP S+P   ATGGAASAKG  +MTST  RTGGEVQ RR RPPVHHTPIPDIPDTF ELQGLSTEKLNRLLGDESARQALLLGMTNVVRMKDLRTDVRKGNVETARLTLAKQDAASVLREEGEKIKAELK LQTSYEDKAHGGGKNMGGTADQMILKRVKHASKMADTSSE+VATDFLEKRVPTQDFLDEFLKERQRYHMLAAKIECMKRDIRF
Sbjct:   74 PVLQLLSPVTHPWVNTYMQVVGHPDLHGWDGTNPPLIGDIVAAVIQEFGRSNGGVTTSGRVQASTVWGGPIAQEP---SGTPPAVGAFGLGNPPVSYPAGRATGGAASAKGKAHMTSTDPRTGGEVQTRRMRPPVHHTPIPDIPDTFGELQGLSTEKLNRLLGDESARQALLLGMTNVVRMKDLRTDVRKGNVETARLTLAKQDAASVLREEGEKIKAELKALQTSYEDKAHGGGKNMGGTADQMILKRVKHASKMADTSSEQVATDFLEKRVPTQDFLDEFLKERQRYHMLAAKIECMKRDIRF 375          
BLAST of mRNA_Ecto-sp13_S_contig6155.16851.1 vs. uniprot
Match: A0A835YJX2_9STRA (VPS37 C-terminal domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJX2_9STRA)

HSP 1 Score: 144 bits (363), Expect = 1.300e-33
Identity = 121/336 (36.01%), Postives = 158/336 (47.02%), Query Frame = 2
Query:  833 PVLQLLSPVTHPWVNTYMQVVGHPDLHGWDGTNPPLIGDIVAAVIQEFGRSNGSVTTSGR------------DQASTVWG--GPIAQQSSGFSGAP--------PAAGAFGLGNPPAS------HPVSGATGGAASAKGYTNMTSTSQ---RTGGEVQIRRARPPVHHTPIPDIPDTFSELQGLSTEKLNRLLGDESARQALLLGMTNVVRMKDLRTDVRKGNVETARLTLAKQDAASVLREEGEKIKAELKTLQTSYEDKAHGGGKNMGGTADQMILKRVKHASKMADTSSERVATDFLEKRVPTQDFLDEFLKERQRYHMLAAKIECMKRDIRF 1747
            PVLQLLS V HPWVN YMQVVGHPDL  W G     I  IV  ++ E   S G+ +T+G+            + AS      GP   Q    S  P        P  G  G  N  +        P  G+  G     G     S SQ     GG     +     H TPIP IP  F+EL GL+  +L RL GD  A   ++ GM +   M++L  D+ KGN E A+  +        LR+E   +K EL           +  G   G +AD + LK VK A+K AD SS+ VA  FL  R    +FL+ F+ +RQRYH  AA++EC+KR++ F
Sbjct:   87 PVLQLLSTVDHPWVNEYMQVVGHPDLALWRGNAGKPISVIVKEIMIEL--SGGTASTAGQALPQQPSQRMPTNAASFAHPSTGPQQWQQQQPSWRPDERKPNWTPPEGPIGAANGNSGGQFWRPQPSDGSQSGGGRVGGGAAQWSPSQVGAGGGGSSTDAKRVEEKHRTPIPAIPSRFAELDGLTEAQLRRLAGDGVALAQIVDGMASARGMRELLRDLAKGNAEVAKANMESSRKLDELRDEITALKMELHEAAA-----LNPVGVGAGASADHVTLKAVKEAAKDADQSSQAVADSFLAGRAGVGEFLEGFMAQRQRYHRCAARMECVKREMGF 415          
BLAST of mRNA_Ecto-sp13_S_contig6155.16851.1 vs. uniprot
Match: A0A7S2HP11_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2HP11_9STRA)

HSP 1 Score: 84.3 bits (207), Expect = 6.880e-14
Identity = 81/302 (26.82%), Postives = 131/302 (43.38%), Query Frame = 2
Query:  833 PVLQLLSPVTHPWVNTYMQVVGHPDLHGWDGTNPPLIGDIVAAVIQEFGRSNGSVTTSGRDQASTVWGGPIAQQSSGFSGAPPAAGAFGLGNPPASHPVSGATGGAASAKGYTNMTSTSQRTGGEVQIRRARPPVHHTPIPDIPDTFSELQGLSTEKLNRLLGDESARQALLLGMTNVVRMKDLRTDVRKGNVETARLTLAKQDAASVLREEGEKIKAELKTLQTSYEDKAHGG-GKNMGGTADQMILKRVKHASKMADTSSERVATDFLEKRVPTQDFLDEFLKERQRYHMLAAKIECMKR 1735
            PVLQLL+P+ H W+N Y Q+VGHP L  WD          +  +I+E      S++    D +ST    P ++       APP+  A  + + P                      ST+ R       R   P    TP+P IP  F +L  +S  +L  L  D+ A QA L G  +V  M D+R  V + N + A+  L ++D   +LR E   ++  L+ ++  ++ K       +    ++  +L+ ++ A   AD  SE VA+      +   +F+  +L  R+ +H   A  E   R
Sbjct:   63 PVLQLLTPLKHHWINQYNQIVGHPYLSNWDSKFE------LTTLIKEVSEELKSLSRQQPDVSSTN---PASRH------APPSYRAAAMLDEP----------------------STTMRQPSPSPKRNDEPEPFKTPLPPIPAHFEDLDLMSVRELETLDRDDVAFQAHLFGFESVRTMCDMREQVIEENAKIAQSNLQRKDELELLRTEALTLQTTLQEIKERFDAKTRARVDADARKCSEGAVLETIRQAVDKADEESEDVASGLRSGDMSAGEFVKAYLPIRKSFHRRNAAQEYSHR 327          
BLAST of mRNA_Ecto-sp13_S_contig6155.16851.1 vs. uniprot
Match: A0A7S2RS55_9STRA (Hypothetical protein n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RS55_9STRA)

HSP 1 Score: 80.5 bits (197), Expect = 1.840e-12
Identity = 80/302 (26.49%), Postives = 131/302 (43.38%), Query Frame = 2
Query:  833 PVLQLLSPVTHPWVNTYMQVVGHPDLHGWDGTNPPLIGDIVAAVIQEFGRSNGSVTTSGRDQASTVWGGPIAQQSSGFSGAPPAAGAFGLGNPPASHPVSGATGGAASAKGYTNMTSTSQRTGGEVQIRR--ARPPVHHT--PIPDIPDTFSELQGLSTEKLNRLLGDESARQALLLGMTNVVRMKDLRTDVRKGNVETARLTLAKQDAASVLREEGEKIKAELKTLQTSYEDKAHGG-GKNMGGTADQMILKRVKHASKMADTSSERVATDFLEKRVPTQDFLDEFLKERQRYHMLAAKIE 1723
            P+LQLLSP  HPWVN Y QV GH  L  W+      +  +V   + E  R   +   +                 +  +  PP          P  H V                   ++R     + RR  A PP      P+P++P +F++LQGL  E+L +L  D  A  ALL  + +V  ++ +R +  + N   AR TL K++    L+ E    + EL+ L+T ++ K      ++    +   I + ++ ++  AD  SE + T F ++ +   +FL  +L+ R+ YH   A IE
Sbjct:   74 PILQLLSPFRHPWVNAYHQVTGHAYLSRWNEQYD--LTTLVKETLAELSRGTPAPQPAIXXXXXXXXXXXXXXXXAVRAPQPP----------PYEHQVXXXX----XXXXXXXXXXAAERRLSTPEQRRPSASPPRQEVSFPLPEVPSSFAQLQGLDRERLQKLDQDVVAFSALLHDLDSVKTLRSMREETIQENARIARETLDKREELEALQSEVLVSRLELQELETEFQTKLQSQLAQDSEKLSQAGIYEALRTSAAEADEKSEDLLTQFQDEDLGMAEFLKSYLELRKLYHRRTAAIE 359          
BLAST of mRNA_Ecto-sp13_S_contig6155.16851.1 vs. uniprot
Match: UPI001EB06E8A (vacuolar protein sorting-associated protein 37A-like n=4 Tax=Haliotis TaxID=6452 RepID=UPI001EB06E8A)

HSP 1 Score: 71.2 bits (173), Expect = 1.940e-9
Identity = 80/310 (25.81%), Postives = 137/310 (44.19%), Query Frame = 2
Query:  833 PVLQLLSPVTHPWVNTYMQVVGHPDLHGWDGTNPPLIGDIVAAVIQEFGRSNGSVTTSGRDQASTVWGGPIAQQSSGFSGAPPAAGAFGLGNPPASHPVSGATGGAASAKGYTNMTSTSQRTGGEV---QIRRARPPVHHTPIPDIPDTFSELQGLSTEKLNRLLGDESARQALLLGMTNVVRMKDLRTDVRKGNVETARLTLAKQDAASVLREEGEKIKAELKTLQTSYEDKAHGGGKNMGGTADQM----ILKRVKHASKMADTSSERVATDFLEKRVPTQDFLDEFLKERQRYHMLAAKIECMKRDI 1741
            P + +  P+THPWV+  M+VVG P+++ +   +   +G  +  +++EF ++   +      Q       P+A  S    G P        GNP A +P+ G                 + R G  +   Q   A  P +  P+PDI   + EL+     +L  L+ +E     LL G+  + R    R D+    V+ AR  L KQ     L++   K  +EL  ++  +E        +    +DQ     I   +K A   A+  SE++A DFL+K++  ++FL  ++++R   HM  AK E + + I
Sbjct:   72 PSVTVQPPLTHPWVDIQMKVVGCPNINNFSMHSD--LGVAIQTIVEEFKKTPPRILPHLVGQQFGAPQPPVAPVSG--PGYPL------YGNPQALYPLVGPP-------PLPPRAVENGREGPPILSDQDTNASSPAY--PVPDIMKAYPELKDKGLFELQELVDNEEKVLDLLQGLPELARFTQDREDISAQCVQLARENLTKQPVVEELKDSVLKKMSELDAIKGEFETHCE----HHLTLSDQFHPANIQTNLKVAVMEAEEESEKIADDFLDKKIDIEEFLQTYMQKRTLCHMRKAKEEKLNQII 358          
BLAST of mRNA_Ecto-sp13_S_contig6155.16851.1 vs. uniprot
Match: UPI0015FFD016 (vacuolar protein sorting-associated protein 37A-like n=1 Tax=Branchiostoma floridae TaxID=7739 RepID=UPI0015FFD016)

HSP 1 Score: 57.0 bits (136), Expect = 2.620e-5
Identity = 48/186 (25.81%), Postives = 87/186 (46.77%), Query Frame = 2
Query: 1169 TNMTSTSQRTGGEVQIRRARPPVHHT-PIPDIPDTFSELQGLSTEKLNRLLGDESARQALLLGMTNVVRMKDLRTDVRKGNVETARLTLAKQDAASVLREEGEKIKAELKTLQTSYEDKAHGGGKNMGGTADQMILKRVKHASKMADTSSERVATDFLEKRVPTQDFLDEFLKERQRYHMLAAKIE 1723
            +  T+T+     EV+++    PV     +PDIP++F E+  LS  +L  L  +E+    L   +    ++   R  +     + AR  L KQ    + ++E  +   E   L+ +++  +      M      MI   +K A++ A+  S+ +A DFLE R+   +FL +F+++R   H   AK E
Sbjct:   30 STSTTTTPTARPEVRVQGNFSPVQFKYKMPDIPESFEEVNSLSVAELKELHDNETKVVDLFSSLPQCQQLYQDRDKLNDATEQLARQNLDKQPMLELKKKELIEKVDEQNELRRAFDKSSQRQNDLMDQFKPAMIQANLKVAAQQAEEESDVIAEDFLEGRMEMDEFLQKFMEKRVLCHTRHAKEE 215          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6155.16851.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D7FJ10_ECTSI6.670e-18492.13VPS37 C-terminal domain-containing protein n=2 Tax... [more]
A0A835YJX2_9STRA1.300e-3336.01VPS37 C-terminal domain-containing protein n=1 Tax... [more]
A0A7S2HP11_9STRA6.880e-1426.82Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S2RS55_9STRA1.840e-1226.49Hypothetical protein n=2 Tax=Rhizochromulina marin... [more]
UPI001EB06E8A1.940e-925.81vacuolar protein sorting-associated protein 37A-li... [more]
UPI0015FFD0162.620e-525.81vacuolar protein sorting-associated protein 37A-li... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6155contigEcto-sp13_S_contig6155:3111..5886 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score546.6
Seed ortholog evalue7.6e-153
Seed eggNOG ortholog2880.D7FJ10
Preferred nameVPS37C
Model size2253
KEGG koko:K09579,ko:K12185
KEGG Pathwayko04144,map04144
KEGG ModuleM00409
Hectar predicted targeting categoryother localisation
GOsGO:0000813,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005768,GO:0005770,GO:0005813,GO:0005815,GO:0005829,GO:0005856,GO:0005886,GO:0006508,GO:0006511,GO:0006807,GO:0006810,GO:0006914,GO:0006996,GO:0007032,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009987,GO:0010008,GO:0010256,GO:0012505,GO:0015630,GO:0016020,GO:0016032,GO:0016043,GO:0016050,GO:0016192,GO:0016197,GO:0016236,GO:0019058,GO:0019068,GO:0019538,GO:0019941,GO:0022607,GO:0030163,GO:0030496,GO:0031090,GO:0031410,GO:0031902,GO:0031974,GO:0031981,GO:0031982,GO:0032801,GO:0032991,GO:0036257,GO:0036258,GO:0036452,GO:0039702,GO:0040012,GO:0040017,GO:0043112,GO:0043162,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043632,GO:0043900,GO:0043902,GO:0043903,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044403,GO:0044419,GO:0044422,GO:0044424,GO:0044425,GO:0044428,GO:0044430,GO:0044433,GO:0044440,GO:0044444,GO:0044446,GO:0044464,GO:0046755,GO:0046907,GO:0048306,GO:0048518,GO:0048524,GO:0050789,GO:0050792,GO:0051179,GO:0051234,GO:0051603,GO:0051641,GO:0051649,GO:0051704,GO:0061919,GO:0065007,GO:0070013,GO:0070925,GO:0071704,GO:0071840,GO:0071944,GO:0097708,GO:0098588,GO:0098796,GO:0098805,GO:1901564,GO:1901565,GO:1901575,GO:1902186,GO:1902188,GO:1903772,GO:1903774,GO:1903900,GO:1903902
Exons2
EggNOG free text desc.endosome transport via multivesicular body sorting pathway
EggNOG OGsKOG3270@1,KOG3270@2759
Ec32 ortholog descriptionModifier of rudimentary, Modr
Ec32 orthologEc-07_004850.1
EC5.2.1.8
Cds size936
COG Functional cat.U
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko03110,ko04131,ko04147
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681463857.91948-UTR-Ecto-sp13_S_contig6155:3110..39241681463857.91948-UTR-Ecto-sp13_S_contig6155:3110..3924Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig6155 3111..3924 +
1681463857.9534173-UTR-Ecto-sp13_S_contig6155:5383..58861681463857.9534173-UTR-Ecto-sp13_S_contig6155:5383..5886Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig6155 5384..5886 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681463857.932244-CDS-Ecto-sp13_S_contig6155:3924..46271681463857.932244-CDS-Ecto-sp13_S_contig6155:3924..4627Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6155 3925..4627 +
1681463857.942842-CDS-Ecto-sp13_S_contig6155:5150..53831681463857.942842-CDS-Ecto-sp13_S_contig6155:5150..5383Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6155 5151..5383 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6155.16851.1prot_Ecto-sp13_S_contig6155.16851.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig6155 3925..5383 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig6155.16851.1

>prot_Ecto-sp13_S_contig6155.16851.1 ID=prot_Ecto-sp13_S_contig6155.16851.1|Name=mRNA_Ecto-sp13_S_contig6155.16851.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=312bp
MPSGGLPVLQLLSPVTHPWVNTYMQVVGHPDLHGWDGTNPPLIGDIVAAV
IQEFGRSNGSVTTSGRDQASTVWGGPIAQQSSGFSGAPPAAGAFGLGNPP
ASHPVSGATGGAASAKGYTNMTSTSQRTGGEVQIRRARPPVHHTPIPDIP
DTFSELQGLSTEKLNRLLGDESARQALLLGMTNVVRMKDLRTDVRKGNVE
TARLTLAKQDAASVLREEGEKIKAELKTLQTSYEDKAHGGGKNMGGTADQ
MILKRVKHASKMADTSSERVATDFLEKRVPTQDFLDEFLKERQRYHMLAA
KIECMKRDIRF*
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mRNA from alignment at Ecto-sp13_S_contig6155:3111..5886+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig6155.16851.1 ID=mRNA_Ecto-sp13_S_contig6155.16851.1|Name=mRNA_Ecto-sp13_S_contig6155.16851.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2776bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6155:3111..5886+ (Ectocarpus species13 EcNAP12_S_4_19m)
GGAGGGGACTGTGCGTCCTGATTTTCCGCTCTCTTAGTCTGAGTGAAGGG TAGGGGGGGAGCGGGGAAGATGTTTGACGCAACTTACAGGTACTTCCTTC TCCAAACGATCAACCTCAGCGAGCATTTCGGCATGTGCGTGACCCTCCCC CTCTTTTTGGAATCCCCTTAGTGCCATCTTCACTCACCTTGACGTTACCT CGCTGGTGTTCTTAGGGTCGCTACTAAGCACGGCGCTTGGATGTCTTCAG TGCTAATGTCAAGCGCATTCCACTCGTGTCTAGTGCGCCCCTCACTTTTG GGGCAGAGGATTTCTTGTCGTTATCGGCAATGCTTAGAAGGTCCGTATGT AGTACGGGGGACTGCAATTACTTTTACGTGGTAGCGCGTTCTGGATGAAG ATGACCGCCTGTGTGCTCCGGAACCTGCCAAATCTCGTCAAGTAGGTCGT GAAAACGAAATTGACGTTTCTTCATAGTTCAGTGGGATGTACGTTTTTTA GTTTTTTTTCGAATCCTCGCACCAGCTTCCTCCCGGCCCGCAAATATGCC GTGGGGTTTGGTTGGGGGCATAAGTCCAGAGTTAGGCCGAGTGAGGATGC CGGGTCGCAGTAAAAGCAAGACAGACCATTTTGCTTGCTTCGCCACTGTT GTTTTTACGTTCACGTGTCGCCCGTTCCACACATATTTACGATCGCAGAG GTTGGCGGGGGCTATCATGTATTCTACGCGGGTCCAGCACGTGCATTCTG ACTTACGCTCGGGTACTGACTTGCAATTTGTTCTTGCATCGGTTTTACGC GCTCTGTTGTTTCAATGCCGTCTGGTGGTCTGCCAGTGCTGCAGCTTTTG TCCCCAGTGACGCACCCGTGGGTAAACACGTACATGCAGGTTGTGGGACA TCCCGATCTACACGGATGGGATGGTACCAATCCACCCCTGATAGGAGACA TCGTTGCAGCAGTCATCCAAGAGTTCGGTCGTTCCAATGGAAGCGTGACA ACGTCTGGGCGTGATCAAGCCTCTACAGTATGGGGAGGGCCGATAGCTCA ACAATCTTCAGGGTTTTCAGGAGCTCCACCAGCCGCGGGAGCATTCGGTT TGGGCAATCCGCCTGCTAGCCATCCTGTCAGCGGCGCAACAGGAGGTGCG GCAAGTGCCAAGGGATACACAAACATGACTAGTACGTCCCAAAGGACAGG GGGAGAAGTGCAGATCCGGAGAGCGAGACCACCTGTGCACCACACGCCAA TCCCTGATATTCCCGACACGTTTAGCGAGCTGCAAGGTTTGTCCACCGAG AAACTCAACCGTCTTCTTGGCGATGAAAGTGCTCGCCAGGCGCTGCTTCT CGGAATGACGAACGTCGTGCGGATGAAGGATCTAAGGACTGACGTGCGCA AGGGAAACGTTGAGACAGCTCGATTAACTTTAGCAAAGCAAGACGCAGCT AGTGTCCTCAGGGAAGAAGGCGAGAAGATAAAGGCAGAGCTGAAGACCTT GCAAACGTCCTACGAAGGTATGCCGCTACGTTTTCGTGTTGCTAAACGTG GCATTCATGTTTTGAGAAACGGTAAAGTCGCGAAACCCTCTCAGGTGGTG CACTTTCTTGCCAGGCAGGAAGTTGGCTCGTCACGTTCTAGCCAGACATG ATGTTGGCTCGCACAATGTCTTAGACAGCTGCACGTGAAGAACAGTTCAG GGACGAACGACAAGTATGACCCCTTCGCAACACTTTTCGCTTGTGGAGTC CCCGAAGGCACGTTCATGCTACATGCATCCGTAGACTGGGTTTGTGTCCA ATAATGCAGCACTTATGATGTCCGGTTTTGCTCGGATCGGGCGATGATGA TTGGACATGCGACCGGAGAATTGGGCGATGATTGGACATGCGACCGGAGA AGTGGCAGTAAACACCCTCGTATGGAGCATGAGACCCACATACAGGTAGA GTGAAGTAGTTTTTGATGGGCAATAAAATAACAACACAGAGGTTGCTTTT AATCTCCGCCGTCTATCCCTGCTGTACATTCTGCTTTCAGATAAGGCCCA TGGAGGCGGCAAAAACATGGGCGGGACAGCTGACCAAATGATTCTGAAGC GAGTCAAGCATGCTTCCAAGATGGCCGACACCAGCTCCGAGCGAGTGGCC ACGGACTTCTTGGAGAAACGTGTTCCGACTCAAGACTTCCTCGACGAGTT TTTGAAGGAGCGACAGCGGTATCATATGCTCGCTGCCAAGATTGAGTGCA TGAAAAGAGACATTCGCTTTTAGACGCTTCGTCTGGGGGTAACCGTCAGT GTGCACAAGTGACTCTACTGTCGTGTCTGGTTCCAGTGTAGTTATATTGC GAGCCTGGAATGGGTAGCGTTTGTTTGTATATATTCTTTGAAACCTTGGT TCCAGAGGCGTGTGCTGCAATATAGGGTGGGTGGGTTAGAAGCAGGAAGG AATACACACTTGTGCCGGATGATCCCACCACCATAAATTTGCCGAGCAAG CAGATTTCAAATCGTTCCATGAAAATGTTTGTGTCTCTTCGCGCCACGGC CCCGCATGGAGCGTACCCAACACAAAAGGTTTAGCTGTAGTAGATTTCCC TTCAGTACGTTGCGCTCCTGCGGAGGATCGTTGAAATGCCACGATACTGA AATCGACCCAAACCCAATCGATATTTGCTGTAGACACGTTTGAAATCAGG CAGGGCCTCGGACCAGAAGCCTTCCCCCGTGGCCTCGGGGGCCTGGTTGA CTCACCTCGTTGGTTTCCAAGCACGG
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig6155:3111..5886+

>mRNA_Ecto-sp13_S_contig6155.16851.1 ID=mRNA_Ecto-sp13_S_contig6155.16851.1|Name=mRNA_Ecto-sp13_S_contig6155.16851.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=936bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6155:3111..5886+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGCCGTCTGGTGGTCTGCCAGTGCTGCAGCTTTTGTCCCCAGTGACGCA
CCCGTGGGTAAACACGTACATGCAGGTTGTGGGACATCCCGATCTACACG
GATGGGATGGTACCAATCCACCCCTGATAGGAGACATCGTTGCAGCAGTC
ATCCAAGAGTTCGGTCGTTCCAATGGAAGCGTGACAACGTCTGGGCGTGA
TCAAGCCTCTACAGTATGGGGAGGGCCGATAGCTCAACAATCTTCAGGGT
TTTCAGGAGCTCCACCAGCCGCGGGAGCATTCGGTTTGGGCAATCCGCCT
GCTAGCCATCCTGTCAGCGGCGCAACAGGAGGTGCGGCAAGTGCCAAGGG
ATACACAAACATGACTAGTACGTCCCAAAGGACAGGGGGAGAAGTGCAGA
TCCGGAGAGCGAGACCACCTGTGCACCACACGCCAATCCCTGATATTCCC
GACACGTTTAGCGAGCTGCAAGGTTTGTCCACCGAGAAACTCAACCGTCT
TCTTGGCGATGAAAGTGCTCGCCAGGCGCTGCTTCTCGGAATGACGAACG
TCGTGCGGATGAAGGATCTAAGGACTGACGTGCGCAAGGGAAACGTTGAG
ACAGCTCGATTAACTTTAGCAAAGCAAGACGCAGCTAGTGTCCTCAGGGA
AGAAGGCGAGAAGATAAAGGCAGAGCTGAAGACCTTGCAAACGTCCTACG
AAGATAAGGCCCATGGAGGCGGCAAAAACATGGGCGGGACAGCTGACCAA
ATGATTCTGAAGCGAGTCAAGCATGCTTCCAAGATGGCCGACACCAGCTC
CGAGCGAGTGGCCACGGACTTCTTGGAGAAACGTGTTCCGACTCAAGACT
TCCTCGACGAGTTTTTGAAGGAGCGACAGCGGTATCATATGCTCGCTGCC
AAGATTGAGTGCATGAAAAGAGACATTCGCTTTTAG
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