prot_Ecto-sp13_S_contig6155.16851.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig6155.16851.1
Unique Nameprot_Ecto-sp13_S_contig6155.16851.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length312
Homology
BLAST of mRNA_Ecto-sp13_S_contig6155.16851.1 vs. uniprot
Match: D7FJ10_ECTSI (VPS37 C-terminal domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FJ10_ECTSI)

HSP 1 Score: 537 bits (1384), Expect = 1.250e-190
Identity = 281/305 (92.13%), Postives = 285/305 (93.44%), Query Frame = 0
Query:    7 PVLQLLSPVTHPWVNTYMQVVGHPDLHGWDGTNPPLIGDIVAAVIQEFGRSNGSVTTSGRDQASTVWGGPIAQQSSGFSGAPPAAGAFGLGNPPASHPVSGATGGAASAKGYTNMTSTSQRTGGEVQIRRARPPVHHTPIPDIPDTFSELQGLSTEKLNRLLGDESARQALLLGMTNVVRMKDLRTDVRKGNVETARLTLAKQDAASVLREEGEKIKAELKTLQTSYEDKAHGGGKNMGGTADQMILKRVKHASKMADTSSERVATDFLEKRVPTQDFLDEFLKERQRYHMLAAKIECMKRDIRF 311
            PVLQLLSPVTHPWVNTYMQVVGHPDLHGWDGTNPPLIGDIVAAVIQEFGRSNG VTTSGR QASTVWGGPIAQ+    SG PPA GAFGLGNPP S+P   ATGGAASAKG  +MTST  RTGGEVQ RR RPPVHHTPIPDIPDTF ELQGLSTEKLNRLLGDESARQALLLGMTNVVRMKDLRTDVRKGNVETARLTLAKQDAASVLREEGEKIKAELK LQTSYEDKAHGGGKNMGGTADQMILKRVKHASKMADTSSE+VATDFLEKRVPTQDFLDEFLKERQRYHMLAAKIECMKRDIRF
Sbjct:   74 PVLQLLSPVTHPWVNTYMQVVGHPDLHGWDGTNPPLIGDIVAAVIQEFGRSNGGVTTSGRVQASTVWGGPIAQEP---SGTPPAVGAFGLGNPPVSYPAGRATGGAASAKGKAHMTSTDPRTGGEVQTRRMRPPVHHTPIPDIPDTFGELQGLSTEKLNRLLGDESARQALLLGMTNVVRMKDLRTDVRKGNVETARLTLAKQDAASVLREEGEKIKAELKALQTSYEDKAHGGGKNMGGTADQMILKRVKHASKMADTSSEQVATDFLEKRVPTQDFLDEFLKERQRYHMLAAKIECMKRDIRF 375          
BLAST of mRNA_Ecto-sp13_S_contig6155.16851.1 vs. uniprot
Match: A0A835YJX2_9STRA (VPS37 C-terminal domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJX2_9STRA)

HSP 1 Score: 144 bits (362), Expect = 3.390e-36
Identity = 121/336 (36.01%), Postives = 158/336 (47.02%), Query Frame = 0
Query:    7 PVLQLLSPVTHPWVNTYMQVVGHPDLHGWDGTNPPLIGDIVAAVIQEFGRSNGSVTTSGR------------DQASTVWG--GPIAQQSSGFSGAP--------PAAGAFGLGNPPAS------HPVSGATGGAASAKGYTNMTSTSQ---RTGGEVQIRRARPPVHHTPIPDIPDTFSELQGLSTEKLNRLLGDESARQALLLGMTNVVRMKDLRTDVRKGNVETARLTLAKQDAASVLREEGEKIKAELKTLQTSYEDKAHGGGKNMGGTADQMILKRVKHASKMADTSSERVATDFLEKRVPTQDFLDEFLKERQRYHMLAAKIECMKRDIRF 311
            PVLQLLS V HPWVN YMQVVGHPDL  W G     I  IV  ++ E   S G+ +T+G+            + AS      GP   Q    S  P        P  G  G  N  +        P  G+  G     G     S SQ     GG     +     H TPIP IP  F+EL GL+  +L RL GD  A   ++ GM +   M++L  D+ KGN E A+  +        LR+E   +K EL           +  G   G +AD + LK VK A+K AD SS+ VA  FL  R    +FL+ F+ +RQRYH  AA++EC+KR++ F
Sbjct:   87 PVLQLLSTVDHPWVNEYMQVVGHPDLALWRGNAGKPISVIVKEIMIEL--SGGTASTAGQALPQQPSQRMPTNAASFAHPSTGPQQWQQQQPSWRPDERKPNWTPPEGPIGAANGNSGGQFWRPQPSDGSQSGGGRVGGGAAQWSPSQVGAGGGGSSTDAKRVEEKHRTPIPAIPSRFAELDGLTEAQLRRLAGDGVALAQIVDGMASARGMRELLRDLAKGNAEVAKANMESSRKLDELRDEITALKMELHEAAA-----LNPVGVGAGASADHVTLKAVKEAAKDADQSSQAVADSFLAGRAGVGEFLEGFMAQRQRYHRCAARMECVKREMGF 415          
BLAST of mRNA_Ecto-sp13_S_contig6155.16851.1 vs. uniprot
Match: A0A7S2HP11_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2HP11_9STRA)

HSP 1 Score: 84.3 bits (207), Expect = 6.770e-15
Identity = 81/302 (26.82%), Postives = 131/302 (43.38%), Query Frame = 0
Query:    7 PVLQLLSPVTHPWVNTYMQVVGHPDLHGWDGTNPPLIGDIVAAVIQEFGRSNGSVTTSGRDQASTVWGGPIAQQSSGFSGAPPAAGAFGLGNPPASHPVSGATGGAASAKGYTNMTSTSQRTGGEVQIRRARPPVHHTPIPDIPDTFSELQGLSTEKLNRLLGDESARQALLLGMTNVVRMKDLRTDVRKGNVETARLTLAKQDAASVLREEGEKIKAELKTLQTSYEDKAHGG-GKNMGGTADQMILKRVKHASKMADTSSERVATDFLEKRVPTQDFLDEFLKERQRYHMLAAKIECMKR 307
            PVLQLL+P+ H W+N Y Q+VGHP L  WD          +  +I+E      S++    D +ST    P ++       APP+  A  + + P                      ST+ R       R   P    TP+P IP  F +L  +S  +L  L  D+ A QA L G  +V  M D+R  V + N + A+  L ++D   +LR E   ++  L+ ++  ++ K       +    ++  +L+ ++ A   AD  SE VA+      +   +F+  +L  R+ +H   A  E   R
Sbjct:   63 PVLQLLTPLKHHWINQYNQIVGHPYLSNWDSKFE------LTTLIKEVSEELKSLSRQQPDVSSTN---PASRH------APPSYRAAAMLDEP----------------------STTMRQPSPSPKRNDEPEPFKTPLPPIPAHFEDLDLMSVRELETLDRDDVAFQAHLFGFESVRTMCDMREQVIEENAKIAQSNLQRKDELELLRTEALTLQTTLQEIKERFDAKTRARVDADARKCSEGAVLETIRQAVDKADEESEDVASGLRSGDMSAGEFVKAYLPIRKSFHRRNAAQEYSHR 327          
BLAST of mRNA_Ecto-sp13_S_contig6155.16851.1 vs. uniprot
Match: A0A7S2RS55_9STRA (Hypothetical protein n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RS55_9STRA)

HSP 1 Score: 80.5 bits (197), Expect = 1.970e-13
Identity = 80/302 (26.49%), Postives = 131/302 (43.38%), Query Frame = 0
Query:    7 PVLQLLSPVTHPWVNTYMQVVGHPDLHGWDGTNPPLIGDIVAAVIQEFGRSNGSVTTSGRDQASTVWGGPIAQQSSGFSGAPPAAGAFGLGNPPASHPVSGATGGAASAKGYTNMTSTSQRTGGEVQIRR--ARPPVHHT--PIPDIPDTFSELQGLSTEKLNRLLGDESARQALLLGMTNVVRMKDLRTDVRKGNVETARLTLAKQDAASVLREEGEKIKAELKTLQTSYEDKAHGG-GKNMGGTADQMILKRVKHASKMADTSSERVATDFLEKRVPTQDFLDEFLKERQRYHMLAAKIE 303
            P+LQLLSP  HPWVN Y QV GH  L  W+      +  +V   + E  R   +   +                 +  +  PP          P  H V                   ++R     + RR  A PP      P+P++P +F++LQGL  E+L +L  D  A  ALL  + +V  ++ +R +  + N   AR TL K++    L+ E    + EL+ L+T ++ K      ++    +   I + ++ ++  AD  SE + T F ++ +   +FL  +L+ R+ YH   A IE
Sbjct:   74 PILQLLSPFRHPWVNAYHQVTGHAYLSRWNEQYD--LTTLVKETLAELSRGTPAPQPAIXXXXXXXXXXXXXXXXAVRAPQPP----------PYEHQVXXXX----XXXXXXXXXXAAERRLSTPEQRRPSASPPRQEVSFPLPEVPSSFAQLQGLDRERLQKLDQDVVAFSALLHDLDSVKTLRSMREETIQENARIARETLDKREELEALQSEVLVSRLELQELETEFQTKLQSQLAQDSEKLSQAGIYEALRTSAAEADEKSEDLLTQFQDEDLGMAEFLKSYLELRKLYHRRTAAIE 359          
BLAST of mRNA_Ecto-sp13_S_contig6155.16851.1 vs. uniprot
Match: UPI001EB06E8A (vacuolar protein sorting-associated protein 37A-like n=4 Tax=Haliotis TaxID=6452 RepID=UPI001EB06E8A)

HSP 1 Score: 71.2 bits (173), Expect = 2.830e-10
Identity = 80/310 (25.81%), Postives = 137/310 (44.19%), Query Frame = 0
Query:    7 PVLQLLSPVTHPWVNTYMQVVGHPDLHGWDGTNPPLIGDIVAAVIQEFGRSNGSVTTSGRDQASTVWGGPIAQQSSGFSGAPPAAGAFGLGNPPASHPVSGATGGAASAKGYTNMTSTSQRTGGEV---QIRRARPPVHHTPIPDIPDTFSELQGLSTEKLNRLLGDESARQALLLGMTNVVRMKDLRTDVRKGNVETARLTLAKQDAASVLREEGEKIKAELKTLQTSYEDKAHGGGKNMGGTADQM----ILKRVKHASKMADTSSERVATDFLEKRVPTQDFLDEFLKERQRYHMLAAKIECMKRDI 309
            P + +  P+THPWV+  M+VVG P+++ +   +   +G  +  +++EF ++   +      Q       P+A  S    G P        GNP A +P+ G                 + R G  +   Q   A  P +  P+PDI   + EL+     +L  L+ +E     LL G+  + R    R D+    V+ AR  L KQ     L++   K  +EL  ++  +E        +    +DQ     I   +K A   A+  SE++A DFL+K++  ++FL  ++++R   HM  AK E + + I
Sbjct:   72 PSVTVQPPLTHPWVDIQMKVVGCPNINNFSMHSD--LGVAIQTIVEEFKKTPPRILPHLVGQQFGAPQPPVAPVSG--PGYPL------YGNPQALYPLVGPP-------PLPPRAVENGREGPPILSDQDTNASSPAY--PVPDIMKAYPELKDKGLFELQELVDNEEKVLDLLQGLPELARFTQDREDISAQCVQLARENLTKQPVVEELKDSVLKKMSELDAIKGEFETHCE----HHLTLSDQFHPANIQTNLKVAVMEAEEESEKIADDFLDKKIDIEEFLQTYMQKRTLCHMRKAKEEKLNQII 358          
BLAST of mRNA_Ecto-sp13_S_contig6155.16851.1 vs. uniprot
Match: UPI0015FFD016 (vacuolar protein sorting-associated protein 37A-like n=1 Tax=Branchiostoma floridae TaxID=7739 RepID=UPI0015FFD016)

HSP 1 Score: 57.4 bits (137), Expect = 5.190e-6
Identity = 48/186 (25.81%), Postives = 87/186 (46.77%), Query Frame = 0
Query:  119 TNMTSTSQRTGGEVQIRRARPPVHHT-PIPDIPDTFSELQGLSTEKLNRLLGDESARQALLLGMTNVVRMKDLRTDVRKGNVETARLTLAKQDAASVLREEGEKIKAELKTLQTSYEDKAHGGGKNMGGTADQMILKRVKHASKMADTSSERVATDFLEKRVPTQDFLDEFLKERQRYHMLAAKIE 303
            +  T+T+     EV+++    PV     +PDIP++F E+  LS  +L  L  +E+    L   +    ++   R  +     + AR  L KQ    + ++E  +   E   L+ +++  +      M      MI   +K A++ A+  S+ +A DFLE R+   +FL +F+++R   H   AK E
Sbjct:   30 STSTTTTPTARPEVRVQGNFSPVQFKYKMPDIPESFEEVNSLSVAELKELHDNETKVVDLFSSLPQCQQLYQDRDKLNDATEQLARQNLDKQPMLELKKKELIEKVDEQNELRRAFDKSSQRQNDLMDQFKPAMIQANLKVAAQQAEEESDVIAEDFLEGRMEMDEFLQKFMEKRVLCHTRHAKEE 215          
BLAST of mRNA_Ecto-sp13_S_contig6155.16851.1 vs. uniprot
Match: A0A8J1TI20_OWEFU (Ofus.G034148 protein n=1 Tax=Owenia fusiformis TaxID=6347 RepID=A0A8J1TI20_OWEFU)

HSP 1 Score: 56.2 bits (134), Expect = 2.970e-5
Identity = 39/164 (23.78%), Postives = 83/164 (50.61%), Query Frame = 0
Query:  146 IPDIPDTFSELQGLSTEKLNRLLGDESARQALLLGMTNVVRMKDLRTDVRKGNVETARLTLAKQDAASVLREEGEKIKAELKTLQTSYEDKAHGGGKNMGGTADQMILKRVKHASKMADTSSERVATDFLEKRVPTQDFLDEFLKERQRYHMLAAKIECMKRDI 309
            +PDIP +F +L+ LS  +L  L  +E     +L  +  ++++ + R  +   N   A+  +A +      +E   K   +L  L+T ++  +    +     + + I   +K A+  A+  SE++A +FL K++P  DF+ ++L++R   H   +K E +++ +
Sbjct:  233 MPDIPTSFPQLRDLSVSELQELSENEDKLLEILQQLPEILKLGEDRQHMCNTNETIAKENIANRPVIEKNKEILLKRFDDLNELKTRFDTNSQKQDELRETYSARNIETTLKLATLEAEEQSEKIADEFLSKKIPIDDFIQQYLEKRSLCHNRRSKEEKLQQIV 396          
BLAST of mRNA_Ecto-sp13_S_contig6155.16851.1 vs. uniprot
Match: A0A8J5AZG3_9DIPT (VPS37 C-terminal domain-containing protein n=2 Tax=Bradysia TaxID=35571 RepID=A0A8J5AZG3_9DIPT)

HSP 1 Score: 54.3 bits (129), Expect = 4.790e-5
Identity = 39/155 (25.16%), Postives = 75/155 (48.39%), Query Frame = 0
Query:  156 LQGLSTEKLNRLLGDESARQALLLGMTNVVRMKDLRTDVRKGNVETARLTLAKQDAASVLREEGEKIKAELKTLQTSYEDKAHGGGKNMGGTADQMILKRVKHASKMADTSSERVATDFLEKRVPTQDFLDEFLKERQRYHMLAAKIECMKRDIR 310
            L  LS+E L  LL D+   +A +  +  +  +++ +T +   NV+ A  +L K+     LR    ++  + K L T  ++K +       G      L  ++ A+  ++ +S+++   FL+K +P   FL++F+  R+  H+   K E M   IR
Sbjct:   16 LNYLSSEDLRELLNDDEKLEARVNEL--LAPLENDKTGILNANVQAAEESLTKEPQLIELRSRVNELSDKSKELCTDIQEKLNEMKSKSSGMNRDTALALLQTAAAESEEASDQIVKQFLDKELPVDGFLEQFMVSRKTMHLRKMKAEKMNELIR 168          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6155.16851.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
D7FJ10_ECTSI1.250e-19092.13VPS37 C-terminal domain-containing protein n=2 Tax... [more]
A0A835YJX2_9STRA3.390e-3636.01VPS37 C-terminal domain-containing protein n=1 Tax... [more]
A0A7S2HP11_9STRA6.770e-1526.82Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S2RS55_9STRA1.970e-1326.49Hypothetical protein n=2 Tax=Rhizochromulina marin... [more]
UPI001EB06E8A2.830e-1025.81vacuolar protein sorting-associated protein 37A-li... [more]
UPI0015FFD0165.190e-625.81vacuolar protein sorting-associated protein 37A-li... [more]
A0A8J1TI20_OWEFU2.970e-523.78Ofus.G034148 protein n=1 Tax=Owenia fusiformis Tax... [more]
A0A8J5AZG3_9DIPT4.790e-525.16VPS37 C-terminal domain-containing protein n=2 Tax... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009851Modifier of rudimentary, ModrPFAMPF07200Mod_rcoord: 158..301
e-value: 9.4E-24
score: 84.2
IPR009851Modifier of rudimentary, ModrPROSITEPS51314VPS37_Ccoord: 230..311
score: 11.145
IPR037859Vacuolar protein sorting-associated protein 37PANTHERPTHR13678WILLIAMS-BEUREN SYNDROME CRITICAL REGION PROTEIN-RELATEDcoord: 7..308
NoneNo IPR availablePANTHERPTHR13678:SF2VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 37Acoord: 7..308

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6155contigEcto-sp13_S_contig6155:3925..5383 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6155.16851.1mRNA_Ecto-sp13_S_contig6155.16851.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig6155 3111..5886 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig6155.16851.1 ID=prot_Ecto-sp13_S_contig6155.16851.1|Name=mRNA_Ecto-sp13_S_contig6155.16851.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=312bp
MPSGGLPVLQLLSPVTHPWVNTYMQVVGHPDLHGWDGTNPPLIGDIVAAV
IQEFGRSNGSVTTSGRDQASTVWGGPIAQQSSGFSGAPPAAGAFGLGNPP
ASHPVSGATGGAASAKGYTNMTSTSQRTGGEVQIRRARPPVHHTPIPDIP
DTFSELQGLSTEKLNRLLGDESARQALLLGMTNVVRMKDLRTDVRKGNVE
TARLTLAKQDAASVLREEGEKIKAELKTLQTSYEDKAHGGGKNMGGTADQ
MILKRVKHASKMADTSSERVATDFLEKRVPTQDFLDEFLKERQRYHMLAA
KIECMKRDIRF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009851Mod_r
IPR037859Vps37