prot_Ecto-sp13_S_contig10063.87.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m
You are viewing a polypeptide, more information available on the corresponding mRNA page
Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig10063.87.1 vs. uniprot
Match: D7FSS4_ECTSI (Poly(A)-binding protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSS4_ECTSI) HSP 1 Score: 302 bits (773), Expect = 2.920e-97 Identity = 271/320 (84.69%), Postives = 272/320 (85.00%), Query Frame = 0 Query: 1 MSQYQQHPAPASGVVDDAGEAFARAVFCRFLRQATISRDIDDVIEHMHIVNDDSQTFAIRLGGDARVPVSRELILALAAKKKELLALCESKLRTPRSIRGGGGQTVTGANTTAAGTPTGXXRPGLSSSLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLGSVPAAMGDPATGGGLSPAVVPPLGVVAIHQQGEGVAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRSAAAAPAFVPTAAVAGWRQRDPAGPTT 320 MSQYQQHPAPASGVVDDAGEAFARAVFCRFLRQATISRDIDDVIEHMHIVNDDSQTFAIRLGGDARVPVSRELILALAAKKKELLALCESKLRTPRSIRGGGG TVTGAN TAAGTPTG RPGLSSSL XXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXL SVPAAMGD ATGGG+SPAVVPPLGVVA HQQGEGVAA XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX R AAAAPAFVPTAA AGWRQRDPAGPTT Sbjct: 1 MSQYQQHPAPASGVVDDAGEAFARAVFCRFLRQATISRDIDDVIEHMHIVNDDSQTFAIRLGGDARVPVSRELILALAAKKKELLALCESKLRTPRSIRGGGGHTVTGANATAAGTPTGGGRPGLSSSLQHYRQQGNPSTXXXXXXXXXXXXXXXXXXXXXXXXXXXMQSSAMAAGSASVXXXXXXXXXXXXXXXXXXXXXXLCSVPAAMGDSATGGGVSPAVVPPLGVVARHQQGEGVAAAAGPDPMVVEGSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVTRVAAAAPAFVPTAAAAGWRQRDPAGPTT 320
BLAST of mRNA_Ecto-sp13_S_contig10063.87.1 vs. uniprot
Match: A0A6H5L5V4_9PHAE (RRM domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5V4_9PHAE) HSP 1 Score: 94.7 bits (234), Expect = 6.170e-18 Identity = 196/278 (70.50%), Postives = 201/278 (72.30%), Query Frame = 0 Query: 60 RLGGDAR-----VPVSRELILALAAKKKELLALCESKLRTPR---------SIRGGGGQTVTGANTTAAG---TPTGXXRPGLSSSLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLGSVPAAMGDPATGGGLSPAVVPPLGVVAIHQQGEGVAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRSAAAAPAFVPTAAVAGWRQRDPAGPTT 320 RL G A+ V V LA A + S R+PR SIRG GG TVTGAN TAAG TPTG RPGLSSSL XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX LGSVPAAM DPATGGG+SPAVVPPLGVVA QQGEG +A XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX PAFVPTAA AGWRQRDPAGPTT Sbjct: 163 RLRGSAKSCFLAVGVDDGGFLAAAVFSASSRSTAFSSRRSPRGPTGRRLLGSIRGAGGHTVTGANATAAGAAGTPTGGGRPGLSSSLQHYRQQGNPSTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLGSVPAAMADPATGGGVSPAVVPPLGVVA-RQQGEGFSAAAEPDPMVVEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPAFVPTAAAAGWRQRDPAGPTT 439 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig10063.87.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 2 ZOOMx 1POSITION0
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_Ecto-sp13_S_contig10063.87.1 ID=prot_Ecto-sp13_S_contig10063.87.1|Name=mRNA_Ecto-sp13_S_contig10063.87.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=320bpback to top |