Homology
BLAST of mRNA_Ecto-sp13_S_contig100607.83.1 vs. uniprot
Match: A0A6H5JI56_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JI56_9PHAE) HSP 1 Score: 99.4 bits (246), Expect = 8.020e-23 Identity = 50/51 (98.04%), Postives = 50/51 (98.04%), Query Frame = 0 Query: 9 ILKMNTRAKEAEGYLRRALRIFSEKLGATDTKASTAMYDLGRCLSLAGQTR 59
ILKMNTRAKEAEGYLRRALRIFSEKLGATDT ASTAMYDLGRCLSLAGQTR
Sbjct: 878 ILKMNTRAKEAEGYLRRALRIFSEKLGATDTTASTAMYDLGRCLSLAGQTR 928
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig100607.83.1 vs. uniprot
Analysis Date: 2022-09-16 ( Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
| Match Name | E-value | Identity | Description | |
|---|
| A0A6H5JI56_9PHAE | 8.020e-23 | 98.04 | Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... | [more] |
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| None | No IPR available | PFAM | PF13424 | TPR_12 | coord: 2..63
e-value: 1.4E-10
score: 41.3 |
| IPR011990 | Tetratricopeptide-like helical domain superfamily | GENE3D | 1.25.40.10 | | coord: 1..63
e-value: 5.4E-10
score: 40.8 |
| IPR011990 | Tetratricopeptide-like helical domain superfamily | SUPERFAMILY | 48452 | TPR-like | coord: 2..63 |
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_Ecto-sp13_S_contig100607.83.1 ID=prot_Ecto-sp13_S_contig100607.83.1|Name=mRNA_Ecto-sp13_S_contig100607.83.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=63bp
TLHSLGLCILKMNTRAKEAEGYLRRALRIFSEKLGATDTKASTAMYDLGR
CLSLAGQTREAEE back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
| Term | Definition |
|---|
| IPR011990 | TPR-like_helical_dom_sf |
|