prot_Ecto-sp13_S_contig18333.5694.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig18333.5694.1 vs. uniprot
Match: D8LD49_ECTSI (DNA polymerase epsilon subunit n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD49_ECTSI) HSP 1 Score: 186 bits (471), Expect = 1.460e-54 Identity = 88/96 (91.67%), Postives = 88/96 (91.67%), Query Frame = 0
Query: 1 PPPPRTSQTNHQCTKTLLHQGHLCPLPLSARPIHWELDDALSLYPLPHVAVLADRTEQYRWLLNDCCSLNPGSFPSDSSFVVYRPATRTVEFSHVD 96
P P T H CTKTLLHQGHLCPLPLSARPIHWELDDALSLYPLPHVAVLADRTEQYRWLLNDCCSLNPGSFPSDSSFVVYRPATRTVEFSHVD
Sbjct: 424 PSDPDMDVTEH-CTKTLLHQGHLCPLPLSARPIHWELDDALSLYPLPHVAVLADRTEQYRWLLNDCCSLNPGSFPSDSSFVVYRPATRTVEFSHVD 518
BLAST of mRNA_Ecto-sp13_S_contig18333.5694.1 vs. uniprot
Match: A0A7S3XUX9_HETAK (DNA polymerase II subunit 2 n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XUX9_HETAK) HSP 1 Score: 129 bits (325), Expect = 6.530e-35 Identity = 57/90 (63.33%), Postives = 66/90 (73.33%), Query Frame = 0
Query: 7 SQTNHQCTKTLLHQGHLCPLPLSARPIHWELDDALSLYPLPHVAVLADRTEQYRWLLNDCCSLNPGSFPSDSSFVVYRPATRTVEFSHVD 96
S TLL QGHLCPLPL ARPIHW+ D AL LYPLPH VLAD+T+QY+W DC + NPGSFP+D SF+VY PAT+ VEFS +D
Sbjct: 203 SDATETLVATLLAQGHLCPLPLPARPIHWKADPALQLYPLPHAVVLADQTDQYKWTYEDCHAFNPGSFPTDFSFIVYTPATQDVEFSKID 292
BLAST of mRNA_Ecto-sp13_S_contig18333.5694.1 vs. uniprot
Match: A0A835YQA3_9STRA (DNA polymerase epsilon subunit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQA3_9STRA) HSP 1 Score: 115 bits (289), Expect = 2.920e-28 Identity = 56/94 (59.57%), Postives = 67/94 (71.28%), Query Frame = 0
Query: 1 PPPPRTSQTNHQCTKTLLHQGHLCPLPLSARPIHWELDDALSLYPLPHVAVLADRTEQYRWLLNDCC-SLNPGSFPSDSSFVVYRPATRTVEFS 93
PP + KTLL QGHLCPLPLS+RPIH + D AL LYPLP V +LADR+EQ+ W +D ++NPGSFPSD SFVVYRP++ VEFS
Sbjct: 429 PPDAPNMDASEHLVKTLLDQGHLCPLPLSSRPIHCQFDAALRLYPLPQVVILADRSEQFSWQYHDSTWAINPGSFPSDFSFVVYRPSSGDVEFS 522
BLAST of mRNA_Ecto-sp13_S_contig18333.5694.1 vs. uniprot
Match: A0A7S2WES5_9STRA (DNA polymerase II subunit 2 (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WES5_9STRA) HSP 1 Score: 105 bits (263), Expect = 1.480e-27 Identity = 48/88 (54.55%), Postives = 64/88 (72.73%), Query Frame = 0
Query: 1 PPPPRTSQTNHQC-TKTLLHQGHLCPLPLSARPIHWELDDALSLYPLPHVAVLADRTEQYRWLLNDCCSLNPGSFPSDSSFVVYRPAT 87
PP P T T +C ++LL QGHLCPLPL+ RPIHW D AL L+P+P V +LAD ++QY DC ++NPGSFP+D SF+VY+P++
Sbjct: 28 PPAPETDAT--ECLVQSLLDQGHLCPLPLTTRPIHWSYDHALRLHPMPDVVILADHSDQYSCTYQDCLAVNPGSFPTDFSFLVYQPSS 113
BLAST of mRNA_Ecto-sp13_S_contig18333.5694.1 vs. uniprot
Match: A0A7S2C1W0_9STRA (DNA polymerase II subunit 2 n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2C1W0_9STRA) HSP 1 Score: 107 bits (266), Expect = 2.730e-27 Identity = 50/93 (53.76%), Postives = 62/93 (66.67%), Query Frame = 0
Query: 3 PPRTSQTNHQCTK----TLLHQGHLCPLPLSARPIHWELDDALSLYPLPHVAVLADRTEQYRWLLNDCCSLNPGSFPSDSSFVVYRPATRTVE 91
PPR+ T+ T+L QGHLCPLPL++RPIHW+ D AL LYP P + VLAD TE Y W DC ++NPGSF S+ +F+VYRPA E
Sbjct: 73 PPRSGDREMDITEHLVATVLDQGHLCPLPLTSRPIHWKYDHALRLYPHPTMVVLADHTEPYNWKYQDCLAINPGSFSSEFAFMVYRPADCDAE 165
BLAST of mRNA_Ecto-sp13_S_contig18333.5694.1 vs. uniprot
Match: A0A0V0GIJ1_SOLCH (DNA polymerase II subunit 2 (Fragment) n=1 Tax=Solanum chacoense TaxID=4108 RepID=A0A0V0GIJ1_SOLCH) HSP 1 Score: 94.4 bits (233), Expect = 4.370e-23 Identity = 44/94 (46.81%), Postives = 54/94 (57.45%), Query Frame = 0
Query: 3 PPRTSQTN---HQCTKTLLHQGHLCPLPLSARPIHWELDDALSLYPLPHVAVLADRTEQYRWLLNDCCSLNPGSFPSDSSFVVYRPATRTVEFS 93
PP T +TN T++HQ HLCPLPL +PI W D L LYP PH VL D++EQ + NPGSF +D +FV YRP + VE S
Sbjct: 14 PPSTEETNDPFEHLVATIIHQSHLCPLPLMVQPIIWNYDHGLHLYPTPHTIVLGDKSEQKAFRYTGVTCFNPGSFSNDGTFVAYRPCNQEVELS 107
BLAST of mRNA_Ecto-sp13_S_contig18333.5694.1 vs. uniprot
Match: A0A1V9YX49_9STRA (DNA polymerase epsilon subunit n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YX49_9STRA) HSP 1 Score: 101 bits (251), Expect = 5.520e-23 Identity = 46/92 (50.00%), Postives = 63/92 (68.48%), Query Frame = 0
Query: 5 RTSQTNHQCTKTLLHQGHLCPLPLSARPIHWELDDALSLYPLPHVAVLADRTEQYRWLLNDCCSLNPGSFPSDSSFVVYRPATRTVEFSHVD 96
RT+ + Q KT++ QGHLCPL LSA+PIHW D +L L+PLP V VLAD+T+Q++ +++PG F D SF++YRPAT E S +D
Sbjct: 432 RTTTVSRQLVKTVIDQGHLCPLSLSAQPIHWAYDGSLQLFPLPDVLVLADKTDQFQVGYAGVAAIHPGPFYVDYSFMLYRPATAVTELSRID 523
BLAST of mRNA_Ecto-sp13_S_contig18333.5694.1 vs. uniprot
Match: A0A1V9Z0I7_9STRA (DNA polymerase II subunit 2 (Fragment) n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9Z0I7_9STRA) HSP 1 Score: 97.4 bits (241), Expect = 7.060e-22 Identity = 43/92 (46.74%), Postives = 62/92 (67.39%), Query Frame = 0
Query: 5 RTSQTNHQCTKTLLHQGHLCPLPLSARPIHWELDDALSLYPLPHVAVLADRTEQYRWLLNDCCSLNPGSFPSDSSFVVYRPATRTVEFSHVD 96
R + + Q KT++ QGHLCPLPLSA+P+HW D++L L+PLP V LAD+T+QY+ + +PG F D SF++YRP++ E S +D
Sbjct: 312 RMTTVSRQLVKTIVDQGHLCPLPLSAQPVHWAFDNSLHLFPLPDVICLADKTDQYQVGYAGVTAFHPGPFYVDYSFMLYRPSSGVAEISSID 403
BLAST of mRNA_Ecto-sp13_S_contig18333.5694.1 vs. uniprot
Match: A0A1R3HTF3_9ROSI (DNA polymerase II subunit 2 n=1 Tax=Corchorus olitorius TaxID=93759 RepID=A0A1R3HTF3_9ROSI) HSP 1 Score: 97.4 bits (241), Expect = 9.080e-22 Identity = 45/96 (46.88%), Postives = 56/96 (58.33%), Query Frame = 0
Query: 3 PPRTSQTN---HQCTKTLLHQGHLCPLPLSARPIHWELDDALSLYPLPHVAVLADRTEQYRWLLNDCCSLNPGSFPSDSSFVVYRPATRTVEFSHV 95
PP T +T+ T++HQ HLCPLPL +PI W D L LYP PH +L DR+EQ + NPGSF D +FV YRP T+ +EFS V
Sbjct: 342 PPSTEETDDPFEHLVATIIHQSHLCPLPLFVQPIIWNYDHGLQLYPTPHTIILGDRSEQKAFKYTGITCFNPGSFSDDGTFVAYRPCTQEIEFSAV 437
BLAST of mRNA_Ecto-sp13_S_contig18333.5694.1 vs. uniprot
Match: A0A024TMJ7_9STRA (DNA polymerase epsilon subunit n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TMJ7_9STRA) HSP 1 Score: 97.4 bits (241), Expect = 1.310e-21 Identity = 44/91 (48.35%), Postives = 59/91 (64.84%), Query Frame = 0
Query: 6 TSQTNHQCTKTLLHQGHLCPLPLSARPIHWELDDALSLYPLPHVAVLADRTEQYRWLLNDCCSLNPGSFPSDSSFVVYRPATRTVEFSHVD 96
++ + KTL+ QGHLCPLP+ ARPIHW D +L L+PLP V +LAD+ +Q++ +PG F D SFV+YRP+T T E S VD
Sbjct: 430 SNDVSRHLVKTLVDQGHLCPLPIPARPIHWAYDSSLQLFPLPAVLILADKCDQFQVNYAGVSVFHPGPFHVDYSFVLYRPSTNTAEISRVD 520 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig18333.5694.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_Ecto-sp13_S_contig18333.5694.1 ID=prot_Ecto-sp13_S_contig18333.5694.1|Name=mRNA_Ecto-sp13_S_contig18333.5694.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=97bpback to top |