mRNA_E-siliculosus-1a_F_contig1058.417.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Homology

BLAST of mRNA_E-siliculosus-1a_F_contig1058.417.1 vs. uniprot
Match: D7G7L2_ECTSI (G-patch_2 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7L2_ECTSI)

HSP 1 Score: 788 bits (2035), Expect = 1.060e-278
Identity = 554/599 (92.49%), Postives = 558/599 (93.16%), Query Frame = 3

Query:  270 MASSKPKKGFSMSLGKPKQSSSSATSAKGPDRATSGGSKSSTSAIGVAHDDEDAGGRGGKRDYVTGIGGGKVVTKEVVVDRGPRVIALASNPWANGGNAAAAATGSVPXXXXXAAERPPTAEEPAGEKSLDQLAAEAIAKESVRGDGSNADAFGLGLDSDRVIGMIGKNPAAGEGDSSNGGATATTTPAAAGSKRKTGVLEQNMIPGLMEVDGEDAKFRHDLGHRAEDLSARSKAYVDVPVSEFGAALLRGMGWKGPEGDGXXXXXXXXXXPDLSKDIEPRHHRLGLGAQPKPPEEMKRPRKKKPGEKPRSSDAERLKIWENKVQEERLRASRPSAAAQLAVMDVVELSEGGGEGGRRRPRAMVLKTQGVPGLNKISVRMEDTGEKVLVDKATATRVSEDELARRPFSENKDRSSRSSDGGGKRXXXXXXXXXXXSGSVEREDVRRERRDKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRVDDDGGRGRXDXIPSKXXXXXXXXXXXXXXXXXXXGNGGQQSGPPAWLRANIRVRVIHKSYGGGRAYLGKGRVVDVPRVGQATVRMDLGELVLEG 2066
            MASSKPKKGFSMSLGKPKQSSSSATSAKGPDRATSGGSKSSTSAIGVAHDDEDAGGRGGKRDYVTGIGGGKVVTKEVVVDRGPRVIALASNPWANG NAAAAA     XXXXX   RPPTAEEPAGEKSLDQLAAEAIAKESVRGDGS+ADAFGLGLDSDRVIGMIGKNPAAGEGDSSNG ATA TTP AAGSKR TG+LEQNMIPGLMEVDGEDAKFRHDLGHRAED SARSKAYVDVPV+EFGAALLRGMGWKGPEGDGXXXXXXXX  PDLSKDIEPRHHRLGLGAQPKPPEEMKRPR KKPGEKPRSSDAERLKIWE KVQEERLRASRPSAAAQLAVMDVVELSEGGGE GRRRPRAMVLKTQGVPGLNKISVRMEDTGEKVLVDK+TATRVSEDELARRPFSENKDRSSRSS      XXXXXXXXXXXSGSVERED RRERR  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX     GGRG X X    XXXXXXXXXXXXXXXXXXX NGGQQSGPPAWLRANIRVRVIHKSYGGGRAYLGKGRVVDVPR GQATVRMDLGELVLEG
Sbjct:    1 MASSKPKKGFSMSLGKPKQSSSSATSAKGPDRATSGGSKSSTSAIGVAHDDEDAGGRGGKRDYVTGIGGGKVVTKEVVVDRGPRVIALASNPWANGSNAAAAAXXXXXXXXXXXXXRPPTAEEPAGEKSLDQLAAEAIAKESVRGDGSSADAFGLGLDSDRVIGMIGKNPAAGEGDSSNGAATAKTTPDAAGSKRNTGLLEQNMIPGLMEVDGEDAKFRHDLGHRAEDFSARSKAYVDVPVAEFGAALLRGMGWKGPEGDGXXXXXXXXG-PDLSKDIEPRHHRLGLGAQPKPPEEMKRPRTKKPGEKPRSSDAERLKIWEKKVQEERLRASRPSAAAQLAVMDVVELSEGGGERGRRRPRAMVLKTQGVPGLNKISVRMEDTGEKVLVDKSTATRVSEDELARRPFSENKDRSSRSSXXXXXXXXXXXXXXXXXSGSVEREDGRRERRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---GGRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGGQQSGPPAWLRANIRVRVIHKSYGGGRAYLGKGRVVDVPRAGQATVRMDLGELVLEG 595

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BLAST of mRNA_E-siliculosus-1a_F_contig1058.417.1 vs. uniprot
Match: A0A835ZCA3_9STRA (DExH-box splicing factor binding site-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCA3_9STRA)

HSP 1 Score: 187 bits (476), Expect = 5.320e-49
Identity = 138/293 (47.10%), Postives = 161/293 (54.95%), Query Frame = 3

Query:  642 AGEKSLDQLAAEAIAKES------VRGDGSNADAFGLGLDSDRVIGM-IGKNPAAGEGDSSNGGATATTTPAAAGSKRKTGVLEQNMIPGLMEVDGED-AKFRHDLGHRAEDLSARSKAYVDVPVSEFGAALLRGMGWKGPEGDGXXXXXXXXXXPDLSKDIEPRHHRLGLGAQPKPPEEMK--RPRKKKPGEKPRSSDAERLKIWENKVQEERLRASRPSAAAQLAVMDVVELSEGGGEGGRRRPRAMVLKTQGVPGLNKISVRMEDTGEKVLVDKATATRVSEDELARRPF 1490
            A EKSLD+LAAE + +E+      ++ +    DA GLGLDSDRVI M +    AAG                     RK G+LE  MIPGL EV G D AK +HDL  RA D+ A+S  Y  VPV EFGAALLRGMGW GP  +                  EPRHHRLGLGA PKPPEE    RPRK+KPGEK  + D E    W  K       A+  +AAA+L V  VVEL+         R RAMVLKTQGVPGL KI VR+E  G +  V +     V EDELA +PF
Sbjct:    8 AKEKSLDELAAEELVREADEERRQLQRNSRGTDA-GLGLDSDRVIAMKVAAEQAAGA--------------------RKRGILEAAMIPGLNEVAGGDGAKLKHDLAIRAADIDAKSDVYRHVPVEEFGAALLRGMGWAGPAPEDKEGNANPLGT------AEPRHHRLGLGAAPKPPEEKHGDRPRKRKPGEKANARDEELRAAWAAKA------AAASAAAARLTVGQVVELTA-------TRRRAMVLKTQGVPGLGKIMVRLEQGGAEEAVSRTDMQLVPEDELALKPF 260

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BLAST of mRNA_E-siliculosus-1a_F_contig1058.417.1 vs. uniprot
Match: A0A7S1TSS7_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TSS7_9STRA)

HSP 1 Score: 133 bits (335), Expect = 5.350e-30
Identity = 91/224 (40.62%), Postives = 125/224 (55.80%), Query Frame = 3

Query:  864 VLEQNMIPGLMEVDGEDAKFRHDLGHRAEDLSARSKAYVDVPVSEFGAALLRGMGWKGPEGDGXXXXXXXXXXPDLSKDIEPRHHRLGLGAQPKPPEEMKRPRKKKPGEKPRSSDAERLKIWENKVQEERLRASRPSAAAQLAVMDVVELSEGGGEGGRRRPRAMVLKTQGVPGLNKISVRMEDTGEKVLVDKATATRVSEDELARRPFSENKDRSSRSSDGGG 1535
            +L Q M+PGL E++ EDAKF+HDL +RAEDL A+ +AY  + + +FGAA+LRGMGW GP  +               K    RHHRLGLGA    P  +  P+ K    + R+ +A   K WE K Q ER R     A+ +L + DVV + +G   G R R    V  T GVPGL++I VR+E+TG    + +  A RV  +EL  RPF + +   + +  GGG
Sbjct:   50 LLLQGMVPGLNEIESEDAKFKHDLRYRAEDLGAKDEAYQRIKIDDFGAAMLRGMGWTGPTKEEEELH---------KKQHGARHHRLGLGAA---PAAILEPKGKGRAARKRADEAN--KEWEAKAQAERERLKE--ASKRLKIGDVVWIRKGDHVGVRGR----VELTVGVPGLDRIRVRLEETGAAADIPRQDAARVGHEELDERPFVDGEAPKAANGGGGG 253

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BLAST of mRNA_E-siliculosus-1a_F_contig1058.417.1 vs. uniprot
Match: A0A7S3GQG0_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GQG0_9STRA)

HSP 1 Score: 114 bits (285), Expect = 6.050e-23
Identity = 101/297 (34.01%), Postives = 146/297 (49.16%), Query Frame = 3

Query:  639 PAGEKSLDQLAAEAIAKESVRGDGSNADAFGLGLDSDRVIGMIGKNPAAGEGDSSNGGATATTTPAAAGSKRKTGVLEQNMIPGLMEVDGEDAKFRHDLGHRAEDLSARSKAYVDVPVSEFGAALLRGMGWKGPEGDGXXXXXXXXXXPDLSKD--IEPRHHRLGLGAQPKPPEEMKRPRKK----KPGEKPRSSDAERLK-----IWENKVQEERLRASRPSAAAQLAVMDVVELSEGGGEGGRRRPRAMVLKTQGVPGLNKISVRMEDTGEKVLVDKATATRVSEDELARRPFSE 1496
            PA  K+LDQ+AA  +  +  +G   + D   L +        I + P A E       A A  T   +  K+K  +L  N+ P L+ +  +  +F++D+  RAEDL+ RS+ Y  +PVS+FGAALLRGMGW GP+ D            +  KD  +  R  RLGLGAQ +PPE  K         K G      + E+ K      WE K  E+RL + R      L   DVV L       GRR   A+V+  +GVPGL+++ +++E +G  + V +     + +DELA  PF E
Sbjct:   89 PAAAKTLDQIAAAELLADLQKGSTEDEDEANLLV--------IKQTPTAAE-------AAANQTDNNSQVKKKAPLLMLNVAPELLSITNDADRFKYDVSSRAEDLNVRSEIYDAIPVSQFGAALLRGMGWAGPDKD-----------EEKKKDEKLVAREQRLGLGAQARPPERAKSNNSNNILGKTGTSTARDEEEKRKESXXXXWEQKA-EQRLHSQR------LQDEDVVWLRGPAELSGRR---AVVVTAKGVPGLDRVRIQLEHSGRILEVGRKECVLLPDDELATTPFVE 349

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BLAST of mRNA_E-siliculosus-1a_F_contig1058.417.1 vs. uniprot
Match: A0A7S3XXE9_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XXE9_HETAK)

HSP 1 Score: 94.0 bits (232), Expect = 2.920e-18
Identity = 50/95 (52.63%), Postives = 61/95 (64.21%), Query Frame = 3

Query:  867 LEQNMIPGLMEVDGEDAKFRHDLGHRAEDLSARSKAYVDVPVSEFGAALLRGMGWKGP-EGDGXXXXXXXXXXPDLSKDIEPRHHRLGLGAQPKP 1148
            L  N IPGL E+  +  +F  D+G RAED+  +S+AY  VPV EFGAA+LRGMGW GP EGDG          P   + + PRH RLGLGA+PKP
Sbjct:  115 LIANAIPGLKEIADDQERFLKDVGMRAEDMDFKSEAYRAVPVEEFGAAMLRGMGWAGPPEGDGE---------PAEEEPLAPRHFRLGLGAEPKP 200

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BLAST of mRNA_E-siliculosus-1a_F_contig1058.417.1 vs. uniprot
Match: A0A1V9Z1I1_9STRA (G-patch_2 domain-containing protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9Z1I1_9STRA)

HSP 1 Score: 90.1 bits (222), Expect = 3.320e-16
Identity = 47/118 (39.83%), Postives = 67/118 (56.78%), Query Frame = 3

Query:  831 PAAAGSKRKTGVLEQNMIPGLMEVDGEDAKFRHDLGHRAEDLSARSKAYVDVPVSEFGAALLRGMGWKGPEGDGXXXXXXXXXXPDLSKDIEPRHHRLGLGAQPKPPEEMKRPRKKKP 1184
            P  A +++   +L +N +PG   +  E+ KF+HD+ HR +D+   S+AY  VP+ EFGAALLRGMGW G +                   ++ RH RLGLGA P+PP E    +KK+P
Sbjct:  103 PVDAKTEKDAPILFRNKVPGADGMTNENDKFKHDISHRPDDMDIHSEAYEAVPIEEFGAALLRGMGWSGKD-----------RVKATGSKVQMRHQRLGLGATPRPPMEGDNKKKKRP 209

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BLAST of mRNA_E-siliculosus-1a_F_contig1058.417.1 vs. uniprot
Match: A0A024THQ2_9STRA (G-patch_2 domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024THQ2_9STRA)

HSP 1 Score: 87.8 bits (216), Expect = 1.200e-15
Identity = 48/105 (45.71%), Postives = 64/105 (60.95%), Query Frame = 3

Query:  849 KRKTGVLEQNMIPGLMEVDGEDAKFRHDLGHRAEDLSARSKAYVDVPVSEFGAALLRGMGWKGPEGDGXXXXXXXXXXPDLSKDIEPRHHRLGLGAQPKPPEEMK 1163
            K+   +L +N IPG+ ++ GE  KF+HDL  R ++L   S+A+  VP+ EFGAALLRGMGW G +             P  SK ++ RH+RLGLGA PKP  E K
Sbjct:  120 KKDAPMLTRNRIPGMDKIVGETNKFKHDLSMRPDELDIHSEAFEAVPIEEFGAALLRGMGWTGKD----------RVEPTGSK-VQMRHYRLGLGATPKPTLESK 213

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BLAST of mRNA_E-siliculosus-1a_F_contig1058.417.1 vs. uniprot
Match: A0A485LIS8_9STRA (Aste57867_21911 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LIS8_9STRA)

HSP 1 Score: 87.0 bits (214), Expect = 1.860e-15
Identity = 50/115 (43.48%), Postives = 69/115 (60.00%), Query Frame = 3

Query:  807 GGATATTTPAAAGSKRKTG-VLEQNMIPGLMEVDGEDAKFRHDLGHRAEDLSARSKAYVDVPVSEFGAALLRGMGWKGPEGDGXXXXXXXXXXPDLSKDIEPRHHRLGLGAQPKP 1148
            GG T T+ P+++ +  K   +L +N IPG+  V G+  KF+HDL  R ++L   S A+  VP+ EFGAALLRGMGW G +             P  +K ++ RH+RLGLGA PKP
Sbjct:  104 GGDTKTSDPSSSSTASKEAPLLSRNRIPGMENVAGDKNKFKHDLSMRPDELDIHSDAFDAVPIEEFGAALLRGMGWTGKD----------RVEPTGAK-VQMRHYRLGLGATPKP 207

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BLAST of mRNA_E-siliculosus-1a_F_contig1058.417.1 vs. uniprot
Match: A0A7S3VCG7_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3VCG7_9STRA)

HSP 1 Score: 90.9 bits (224), Expect = 2.740e-15
Identity = 80/235 (34.04%), Postives = 103/235 (43.83%), Query Frame = 3

Query:  918 KFRHDLGHRAEDLSARSKAYVDVPVSEFGAALLRGMGWKGPEGDGXXXXXXXXXXPDLSKD-----------IEPRHHRLGLGAQPKPPE---------------------------EMKRPRKKKPGEKPR----SSDAERLKIWENKVQEERLRASRPSAAAQLAVMDVVELSEGGGEGGRRRPRAMVLKTQGVPGLNKISVRMED--TGEKVLVDKATATRVSEDELARRPF 1490
            K++ DL HRAED+S  S AYV VP+SEFGAA+LRGMGW G                D SKD           I PR HRLGLGA P PP                              KR R +K G        + D E  + W+ K+ E++ R        Q+  +  V  + G  +  R R RA ++K  GVPGLN+I V+ E    G    + K   + V  + L R PF
Sbjct:   71 KYQRDLAHRAEDVSVTSSAYVSVPISEFGAAMLRGMGWSGN---------------DKSKDKXXXXXXXXXXIAPRPHRLGLGATPLPPSMSSGRGGTYNGTNTGXXXXXXXXXXXXXXKRHRARKGGSMEDIARVTKDEEAERQWKLKLLEKKKR--NVQVTQQVGSIVYVHDNYGDRDSRRVRRRAKLVKIAGVPGLNRILVQYEHEAAGATTSIKKREVSLVDPEALERSPF 288

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BLAST of mRNA_E-siliculosus-1a_F_contig1058.417.1 vs. uniprot
Match: A0A067CMB8_SAPPC (G-patch_2 domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CMB8_SAPPC)

HSP 1 Score: 87.0 bits (214), Expect = 3.320e-15
Identity = 45/96 (46.88%), Postives = 58/96 (60.42%), Query Frame = 3

Query:  864 VLEQNMIPGLMEVDGEDAKFRHDLGHRAEDLSARSKAYVDVPVSEFGAALLRGMGWKGPEGDGXXXXXXXXXXPDLSKDIEPRHHRLGLGAQPKPP 1151
            +L +N +PGL  +  E+ KF+HD+  R +D+   S AY  VP+ EFGAALLRGMGW G +             P  SK ++ RH RLGLGA PKPP
Sbjct:  118 ILFRNKLPGLENLTNENDKFKHDISMRPDDMDIHSDAYEAVPIEEFGAALLRGMGWSGKD----------RVQPTGSK-VQMRHQRLGLGATPKPP 202

The following BLAST results are available for this feature:

BLAST of mRNA_E-siliculosus-1a_F_contig1058.417.1 vs. uniprot

BLAST of mRNA_E-siliculosus-1a_F_contig1058.417.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25

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POSITION

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Match Name	E-value	Identity	Description
D7G7L2_ECTSI	1.060e-278	92.49	G-patch_2 domain-containing protein n=2 Tax=Ectoca...	[more]
A0A835ZCA3_9STRA	5.320e-49	47.10	DExH-box splicing factor binding site-domain-conta...	[more]
A0A7S1TSS7_9STRA	5.350e-30	40.63	Hypothetical protein n=1 Tax=Phaeomonas parva TaxI...	[more]
A0A7S3GQG0_9STRA	6.050e-23	34.01	Hypothetical protein n=1 Tax=Spumella elongata Tax...	[more]
A0A7S3XXE9_HETAK	2.920e-18	52.63	Hypothetical protein (Fragment) n=1 Tax=Heterosigm...	[more]
A0A1V9Z1I1_9STRA	3.320e-16	39.83	G-patch_2 domain-containing protein n=1 Tax=Thraus...	[more]
A0A024THQ2_9STRA	1.200e-15	45.71	G-patch_2 domain-containing protein n=1 Tax=Aphano...	[more]
A0A485LIS8_9STRA	1.860e-15	43.48	Aste57867_21911 protein n=1 Tax=Aphanomyces stella...	[more]
A0A7S3VCG7_9STRA	2.740e-15	34.04	Hypothetical protein n=1 Tax=Chaetoceros debilis T...	[more]
A0A067CMB8_SAPPC	3.320e-15	46.88	G-patch_2 domain-containing protein n=2 Tax=Saprol...	[more]

Pages

Properties


Property Name	Value
Start	1
Stop	0
Cds size	1797
Model size	2066
Exons	5
Ec32 ortholog	Ec-22_001960.1
Ec32 ortholog description	Homologue of Arabidopsis MOS2 (MODIFIER OF SNC1, 2)
Hectar predicted targeting category	other localisation
BRITE	ko00000,ko00001,ko00002,ko01000,ko03032,ko03036,ko03041,ko03400
Best eggNOG OG	NA\|NA\|NA
Best tax level	Eukaryota
COG Functional cat.	S
EC	2.4.2.30,3.5.1.3
EggNOG OGs	KOG4315@1,KOG4315@2759
EggNOG free text desc.	defense response signaling pathway, resistance gene-dependent
GOs	GO:0000375,GO:0000377,GO:0000398,GO:0002218,GO:0002253,GO:0002376,GO:0002682,GO:0002684,GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005681,GO:0006139,GO:0006396,GO:0006397,GO:0006725,GO:0006807,GO:0006950,GO:0006952,GO:0007154,GO:0007165,GO:0008150,GO:0008152,GO:0008380,GO:0009605,GO:0009607,GO:0009617,GO:0009870,GO:0009987,GO:0010467,GO:0016070,GO:0016071,GO:0023052,GO:0031347,GO:0031349,GO:0031974,GO:0031981,GO:0032991,GO:0034641,GO:0042742,GO:0043170,GO:0043207,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0044237,GO:0044238,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0045088,GO:0045089,GO:0046483,GO:0048518,GO:0048583,GO:0048584,GO:0050776,GO:0050778,GO:0050789,GO:0050794,GO:0050896,GO:0051704,GO:0051707,GO:0051716,GO:0065007,GO:0070013,GO:0071704,GO:0080134,GO:0090304,GO:0097159,GO:0098542,GO:1901360,GO:1901363,GO:1990904
KEGG Module	M00296
KEGG Pathway	ko00250,ko03410,ko04210,ko04212,ko04214,ko04217,map00250,map03410,map04210,map04212,map04214,map04217
KEGG Reaction	R00269,R00348
KEGG ko	ko:K10798,ko:K13101,ko:K13566
KEGG rclass	RC00010
Preferred name	GPKOW
Seed eggNOG ortholog	2880.D7G7L2
Seed ortholog evalue	4e-227
Seed ortholog score	794.3
Taxonomic scope	Eukaryota

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at E-siliculosus-1a_F_contig1058:31995..37266+
coding sequence from alignment at E-siliculosus-1a_F_contig1058:31995..37266+

protein sequence of mRNA_E-siliculosus-1a_F_contig1058.417.1

>prot_E-siliculosus-1a_F_contig1058.417.1 ID=prot_E-siliculosus-1a_F_contig1058.417.1|Name=mRNA_E-siliculosus-1a_F_contig1058.417.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=599bp
MASSKPKKGFSMSLGKPKQSSSSATSAKGPDRATSGGSKSSTSAIGVAHD
DEDAGGRGGKRDYVTGIGGGKVVTKEVVVDRGPRVIALASNPWANGGNAA
AAATGSVPPPTATAAERPPTAEEPAGEKSLDQLAAEAIAKESVRGDGSNA
DAFGLGLDSDRVIGMIGKNPAAGEGDSSNGGATATTTPAAAGSKRKTGVL
EQNMIPGLMEVDGEDAKFRHDLGHRAEDLSARSKAYVDVPVSEFGAALLR
GMGWKGPEGDGGGGGGGGGGGPDLSKDIEPRHHRLGLGAQPKPPEEMKRP
RKKKPGEKPRSSDAERLKIWENKVQEERLRASRPSAAAQLAVMDVVELSE
GGGEGGRRRPRAMVLKTQGVPGLNKISVRMEDTGEKVLVDKATATRVSED
ELARRPFSENKDRSSRSSDGGGKRGRSRSRSRSRSSGSVEREDVRRERRD
KKGKKKHKKSGGGSSSSSSSKRERSSDGRRSSPSPRRRRSDEEGDRHRRR
DGRRVDDDGGRGRRDDIPSKKSRRDDGDSERGRYSNGNAGNGGQQSGPPA
WLRANIRVRVIHKSYGGGRAYLGKGRVVDVPRVGQATVRMDLGELVLEG

mRNA from alignment at E-siliculosus-1a_F_contig1058:31995..37266+

Legend: UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_E-siliculosus-1a_F_contig1058.417.1 ID=mRNA_E-siliculosus-1a_F_contig1058.417.1|Name=mRNA_E-siliculosus-1a_F_contig1058.417.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=5272bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1058:31995..37266+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
CTGGCACAGCAGGCCTGCGCAGGCGCCTGCGTGGAACCGTCTCTGCCATC
CTGACTCTCTTTTCAAAGAAAAAATTAGTCGGTGTGTACTGTGTGGCTTC
CACCAGCGGGAGTCACGCAGCTCTAGTATTTCAAACCTTTATTTTTTGGG
TCTGCCCCACAACACCCAGCGCACGCACTCTCAGCCTGCAATCCTGAGCA
GGGAGATACTGCTGTAGGGCGAGGACGAGAAGTTGTGTGTGGATTGCCAT
CCTAAATCACGACACCATCATGGCGAGCTCTAAGCCCAAGAAGGGCTTCT
CCATGTCCTTGGGCAAGCCTAAGCAATCCTCCTCCTCTGCTACGTCGGCC
AAGGGACCAGATCGCGCCACCAGCGGCGGCAGCAAGTCTTCCACTTCGGC
GATAGGCGTAGCCCACGATGACGAGGACGCAGGGGGGAGGGGAGGCAAGC
GGGACTACGTGACCGGAATCGGCGGGGGCAAGGTCGTCACGAAAGAGGTC
GTCGTGGACAGAGGCCCCCGCGTTATCGCCCTCGCCTCCAACCCCTGGGC
TAACGGCGGCAACGCCGCTGCTGCTGCTACCGGGTCTGTTCCTCCGCCCA
CAGCAACGGCAGCCGAACGCCCACCCACGGCAGAAGAGCCGGCAGGCGAG
AAATCTCTCGATCAGCTAGCGGCTGAAGCCATCGCCAAGGAATCCGTCCG
CGGCGACGGGTCTAACGCCGACGCCTTTGGGCTGGGCCTCGACTCCGACA
GAGTAATCGGCATGATCGGCAAGAACCCCGCCGCCGGCGAAGGCGACAGC
AGTAACGGCGGTGCAACGGCGACGACAACACCCGCCGCCGCCGGCAGCAA
AAGGAAAACTGGCGTGCTGGAGCAGAACATGATCCCCGGGCTGATGGAGG
TGGACGGGGAGGACGCCAAGTTTAGGCACGACCTAGGGCACCGAGCGGAG
GACCTCAGCGCTCGCAGCAAGGCCTACGTCGACGTTCCGGTCTCAGAGTT
CGGCGCGGCGCTGCTCCGGGGGATGGGGTGGAAGGGGCCAGAAGGAGACG
GCGGCGGCGGCGGCGGCGGTGGCGGAGGCGGGCCGGATCTGTCCAAGGAT
ATTGAGCCCAGGCATCACAGGCTCGGGTTGGGGGCGCAGCCGAAGCCCCC
AGAGGAGGTGAGGGGAGAGGCGGGGCAAGAGACGGATCGCCGACGTGTTG
TTTGCCATGGGCGAGTCTTGTGTCGGCGTCGTCGTCGCTGCTGGTATGGC
GGTGAAGGAACGTCGTGTTCGTGTTGAATTGCTGTGGTGCAGCTGTTGTG
GTTTGCACGAATGCCGTGTGCGCATGAAGATGCGCATGAGCGTCGTAGGA
GGGTGGGCTAAGTATTTTTGCCGCGTCTCCCCTGCCGGAAGATGGAAGAG
CAACGAACGGGTTTAGGCACAGAAAAGGAGTCTTCTAGTTTTAGTGGCGA
TTGGGGGATGGGGGGCTCGGGGGGTGTCTGCGGCACGTCTCATCGTTGTT
TTCGAGCCACCGCTTCCTTCAGGATTTCCAGGAGCCGACGGGTTGGTGTC
TTGCGAGAGACGGCGTCGCAATGCATGCCGCTTGTTGCCCGGGCTCTTCT
CTTGCCGCTGTATCACGAGCGATGTGACTGTCTTCTAATTGGCACAATGT
TCCCTCAGTCTTGCATTTGCACACGAGTAAGACCTGATCGTTGTTTGGTG
TACCGGAGCTGTCTTCGTCGGTACCACACCTGGTACACCAGCGTTGGCCG
TAGTACACCTTCGTGAGTACTGACGTGCGTGTTTGCTACGCTTGTGGTGA
CGAAGTTGTGGGCTTGTTTGTGGTCTGGTTCCGGATTCGTCGCTGCTTTG
GCTAAAACTCTGCAAACCCTTTCAGAGCATAACGCGTCGCTGGTAGCCTG
TCAGAATACCTACTGCAGTAGCCCCGACGTCTTTGCCGCGCGTGAGCCCC
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCTCCCCCCACTCCTCCCT
CNNNNNNNNNNCTCCAACCCCTTTCGGAGAAAACCGCGCGGCGGGTGCCC
GGTAAGAACACCCCCTGCCGGCGCCCCGCCGTCTTTGCCCCGCGGGGGCC
CCCCCCCCCCCCCCCCCTGACCCTTGTCTCGCCGCCGGTTCCCCGGTACA
ACCACTCCGGTCACCTTAATTGCCGTTCCACGTTTGTGTCAATTGCACGG
CGTCATCGCTTACTTTTCTTTCCATCTGCTGCGCGCCTCCTCAAATCTAA
TCCACAGATGAAACGGCCACGGAAAAAGAAGCCTGGAGAGAAGCCGAGGT
CATCGGACGCGGAACGCCTCAAGGTGTGGCGTCATTTCTTGGTTGCATCG
AGGTTGGAGGGACGGTCTTGGCCCGTTTCAGCCAGCAGGCCATAAACCTT
TGGATCGGTTGACGCTAATCCAGTACCGCTGAAAACAGGGCTACGTTTGT
GTCAACCACATTGTTGGCCTGACATCGTGCGTACTTACCATGGTCACGAA
CATACGACATCCAATGGGGTTTCGTGCTTGTCCATCCATTGTTCAAGAAA
GAGTGCCGAGAACAACGTTCTCCTGGGAGTTAGTCCCCCCCCCATAATGT
TGTGTTCACCCCCTGCCACTCTCGGGGGGCAGACAAGCAGCGCTGAGGGC
CGTTCGCCCCCCCCCCGGTACTCTCTGTCCCTGCGAATCGACGTGACCCC
GCCCACCATCGTCTCTCCTCTCGGTCCTAACCCTCATCCGGCGTGCCCTC
CCTGCGCTACACGCCCAATCAGATCTGGGAGAATAAGGTTCAGGAGGAGC
GCTTGCGGGCATCACGGCCAAGTGCGGCTGCGCAGCTAGCCGTCATGGAC
GTAGTGGAGTTGTCGGAGGGAGGGGGCGAGGGGGGCAGGCGCCGGCCTCG
AGCGATGGTGCTCAAGACGCAGGGGGTGCCCGGGCTAAACAAGATATCCG
TGAGGTATGCTGCTTATCTGCTGGCTGACGCGAGGGAGGTGCTTGACCAT
ATACGAGCGGACTTGCCTGGAGCGACGTAGTTTGAAGGTCCCAACAATGT
CAACGAGGGTTGGTACCGACCACGTTTCGCGACTAACAACCGGCGTGCAT
TGGCTGTACTTTTTTCATGCAACAAATCGGTTGAAAACGTCTGTAGCTTC
TTCACATGCAACATGGATTTGGCATGCTTCGTGGATTGGACCTATCATTC
CGATTGTTTGTTCACTTTCGTGGATGGTGAGTTACGTCACTGTAACATAT
TTTTTTACACCCATCTGGTGTATTTTTTTCTTGCATGTTTTATTTCCAAA
CGTTGCATTGCTTGCTCCATGTCTTGGTGTTTGAGTTCCCTTTGTCAATC
TATTCGTTCTGCATTTGTACCGAAACCTTTAGTGTCGAGATTCAGTTGGT
TTGTGTCTATTTTCACGTGTGTACTAGTAGTGCAAAGCAAGGATTTGGCG
TTGTATTTTCAGCAGAAATATCAATACTTTTCAAGAAGGCGCGCCGTGGC
CCGAGTACATGTTTGTACCAAAAAGGGGTGCATGGCAGAACCAGACGACC
ACGCCGCCCCTACTCTCCCGCGCTGTTGCTCTTTACCATGAGAGCCTCAG
CGGTACCGCCGTAACTCTACGATACCCGATACTTGATCATTCGAGGACAC
CAACACGAACGAACCTGTTGCCACTGCTGTGTGGCCGACCACCGTCCAGT
ATAGCTCAAGACACCTATGCATATCACGACATCCCCCCCCTCCAACTTGC
TCTGCTGCTCCCGCGTATCTTGGCGCTCTCTCTCTTATGTTTTTGTTCTG
GATGGAAGACCCGACCGACCCCTCCTTCCTCTTTCTCTGACGGCCCCCTC
GTATCTTGGTACGCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC
TCTCTCTCTCTCTGGTATTTCCTTTTTTGTTCAGGATGGAAGACACGGGC
GAGAAGGTTCTCGTGGACAAGGCGACCGCGACGCGCGTTTCCGAGGACGA
GTTGGCGCGAAGGCCGTTCTCGGAAAACAAGGACCGTTCTTCACGCAGCA
GCGATGGCGGCGGGAAGAGGGGCCGGAGTCGGAGCCGGAGCCGGAGCCGA
AGCAGCGGTAGCGTCGAGAGGTGAGTGGACTGGACGTCGGAATACTCTGC
TCGCGAAGCATCCTCTCGAGGCTTTCGTGATCGGTTTCGGATAATGATTT
CCTCCTTTTGCTCCATCTATGTTCTTCGTGTTCCTGCAGTATTTTGACGT
CAGCTTTTCTCCTCGTATAGTATGGAATCGAACAGTGGATCCCCTCCCAC
GGTAGGTGCGGCCACTTCTCCCGTACTGCTACTGTAGGTGCAAGGTTTCC
TTGGCTCATCTACATCTCGCGGGGAGGTGCATCAGTGGCTGAGTTGCGTA
GTCCGGTTCGACCGGGAGGATTGAGGCGCAAGGGTCGTTTTTAGCGATCG
CTCTAAAAGAGAAGGCTGGTAGTGCTGAGCAATGCTTGATGTACACGCGC
CTAAAATGGAGCTTGTTTCATGGAGGGTGGTACTGTATGCTTGGAACCGA
AATTATCTGCGAGTAAGAGCGCCTGGTTGAGAACTCGGTTGATCCGGCGA
ATCGCACAAGCACACGCTCCGACTTAAACGACACACTTAAGAGTGCCTGC
CCGAGGGTGGAGTGGTTGATTCGTTCACTGCGTTCGCGCTTCGTAGCAAT
AATTTGGAAACGCTTTTACCATTCCCACGTGCGGCGTGTGGCTGCAGGGA
AGACGTCCGTCGAGAGCGAAGAGACAAAAAGGGCAAGAAGAAGCACAAGA
AAAGCGGGGGCGGCAGCAGCAGCAGCAGCAGCAGCAAGCGAGAGCGGAGC
AGCGACGGCCGGAGATCCTCCCCCTCACCCCGCCGCCGCCGCTCCGACGA
GGAAGGCGACCGACACCGCCGACGCGACGGACGGAGAGTCGACGATGACG
GGGGGAGGGGACGCCGGGATGACATCCCCTCTAAGAAAAGCCGCCGCGAT
GATGGGGACAGCGAGAGAGGCCGCTACAGCAACGGTAACGCCGGCAATGG
AGGTCAGCAGTCCGGGCCGCCGGCCTGGCTGCGAGCCAACATTCGGGTGC
GAGTCATCCATAAGTCGTACGGCGGGGGGCGGGCGTACCTGGGGAAGGGG
AGGGTGGTGGATGTGCCGCGCGTCGGGCAGGCGACCGTTCGAATGGACCT
CGGCGAGCTTGTTCTCGAAGGT

Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1058:31995..37266+

>mRNA_E-siliculosus-1a_F_contig1058.417.1 ID=mRNA_E-siliculosus-1a_F_contig1058.417.1|Name=mRNA_E-siliculosus-1a_F_contig1058.417.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=3594bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1058:31995..37266+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ATGGCGAGCTCTAAGCCCAAGAAGGGCTTCTCCATGTCCTTGGGCAAGCC
TAAGCAATCCTCCTCCTCTGCTACGTCGGCCAAGGGACCAGATCGCGCCA
CCAGCGGCGGCAGCAAGTCTTCCACTTCGGCGATAGGCGTAGCCCACGAT
GACGAGGACGCAGGGGGGAGGGGAGGCAAGCGGGACTACGTGACCGGAAT
CGGCGGGGGCAAGGTCGTCACGAAAGAGGTCGTCGTGGACAGAGGCCCCC
GCGTTATCGCCCTCGCCTCCAACCCCTGGGCTAACGGCGGCAACGCCGCT
GCTGCTGCTACCGGGTCTGTTCCTCCGCCCACAGCAACGGCAGCCGAACG
CCCACCCACGGCAGAAGAGCCGGCAGGCGAGAAATCTCTCGATCAGCTAG
CGGCTGAAGCCATCGCCAAGGAATCCGTCCGCGGCGACGGGTCTAACGCC
GACGCCTTTGGGCTGGGCCTCGACTCCGACAGAGTAATCGGCATGATCGG
CAAGAACCCCGCCGCCGGCGAAGGCGACAGCAGTAACGGCGGTGCAACGG
CGACGACAACACCCGCCGCCGCCGGCAGCAAAAGGAAAACTGGCGTGCTG
GAGCAGAACATGATCCCCGGGCTGATGGAGGTGGACGGGGAGGACGCCAA
GTTTAGGCACGACCTAGGGCACCGAGCGGAGGACCTCAGCGCTCGCAGCA
AGGCCTACGTCGACGTTCCGGTCTCAGAGTTCGGCGCGGCGCTGCTCCGG
GGGATGGGGTGGAAGGGGCCAGAAGGAGACGGCGGCGGCGGCGGCGGCGG
TGGCGGAGGCGGGCCGGATCTGTCCAAGGATATTGAGCCCAGGCATCACA
GGCTCGGGTTGGGGGCGCAGCCGAAGCCCCCAGAGGAGATGGCGAGCTCT
AAGCCCAAGAAGGGCTTCTCCATGTCCTTGGGCAAGCCTAAGCAATCCTC
CTCCTCTGCTACGTCGGCCAAGGGACCAGATCGCGCCACCAGCGGCGGCA
GCAAGTCTTCCACTTCGGCGATAGGCGTAGCCCACGATGACGAGGACGCA
GGGGGGAGGGGAGGCAAGCGGGACTACGTGACCGGAATCGGCGGGGGCAA
GGTCGTCACGAAAGAGGTCGTCGTGGACAGAGGCCCCCGCGTTATCGCCC
TCGCCTCCAACCCCTGGGCTAACGGCGGCAACGCCGCTGCTGCTGCTACC
GGGTCTGTTCCTCCGCCCACAGCAACGGCAGCCGAACGCCCACCCACGGC
AGAAGAGCCGGCAGGCGAGAAATCTCTCGATCAGCTAGCGGCTGAAGCCA
TCGCCAAGGAATCCGTCCGCGGCGACGGGTCTAACGCCGACGCCTTTGGG
CTGGGCCTCGACTCCGACAGAGTAATCGGCATGATCGGCAAGAACCCCGC
CGCCGGCGAAGGCGACAGCAGTAACGGCGGTGCAACGGCGACGACAACAC
CCGCCGCCGCCGGCAGCAAAAGGAAAACTGGCGTGCTGGAGCAGAACATG
ATCCCCGGGCTGATGGAGGTGGACGGGGAGGACGCCAAGTTTAGGCACGA
CCTAGGGCACCGAGCGGAGGACCTCAGCGCTCGCAGCAAGGCCTACGTCG
ACGTTCCGGTCTCAGAGTTCGGCGCGGCGCTGCTCCGGGGGATGGGGTGG
AAGGGGCCAGAAGGAGACGGCGGCGGCGGCGGCGGCGGTGGCGGAGGCGG
GCCGGATCTGTCCAAGGATATTGAGCCCAGGCATCACAGGCTCGGGTTGG
GGGCGCAGCCGAAGCCCCCAGAGGAGATGAAACGGCCACGGAAAAAGAAG
CCTGGAGAGAAGCCGAGGTCATCGGACGCGGAACGCCTCAAGATGAAACG
GCCACGGAAAAAGAAGCCTGGAGAGAAGCCGAGGTCATCGGACGCGGAAC
GCCTCAAGATCTGGGAGAATAAGGTTCAGGAGGAGCGCTTGCGGGCATCA
CGGCCAAGTGCGGCTGCGCAGCTAGCCGTCATGGACGTAGTGGAGTTGTC
GGAGGGAGGGGGCGAGGGGGGCAGGCGCCGGCCTCGAGCGATGGTGCTCA
AGACGCAGGGGGTGCCCGGGCTAAACAAGATATCCGTGAGATCTGGGAGA
ATAAGGTTCAGGAGGAGCGCTTGCGGGCATCACGGCCAAGTGCGGCTGCG
CAGCTAGCCGTCATGGACGTAGTGGAGTTGTCGGAGGGAGGGGGCGAGGG
GGGCAGGCGCCGGCCTCGAGCGATGGTGCTCAAGACGCAGGGGGTGCCCG
GGCTAAACAAGATATCCGTGAGGATGGAAGACACGGGCGAGAAGGTTCTC
GTGGACAAGGCGACCGCGACGCGCGTTTCCGAGGACGAGTTGGCGCGAAG
GCCGTTCTCGGAAAACAAGGACCGTTCTTCACGCAGCAGCGATGGCGGCG
GGAAGAGGGGCCGGAGTCGGAGCCGGAGCCGGAGCCGAAGCAGCGGTAGC
GTCGAGAGGATGGAAGACACGGGCGAGAAGGTTCTCGTGGACAAGGCGAC
CGCGACGCGCGTTTCCGAGGACGAGTTGGCGCGAAGGCCGTTCTCGGAAA
ACAAGGACCGTTCTTCACGCAGCAGCGATGGCGGCGGGAAGAGGGGCCGG
AGTCGGAGCCGGAGCCGGAGCCGAAGCAGCGGTAGCGTCGAGAGGGAAGA
CGTCCGTCGAGAGCGAAGAGACAAAAAGGGCAAGAAGAAGCACAAGAAAA
GCGGGGGCGGCAGCAGCAGCAGCAGCAGCAGCAAGCGAGAGCGGAGCAGC
GACGGCCGGAGATCCTCCCCCTCACCCCGCCGCCGCCGCTCCGACGAGGA
AGGCGACCGACACCGCCGACGCGACGGACGGAGAGTCGACGATGACGGGG
GGAGGGGACGCCGGGATGACATCCCCTCTAAGAAAAGCCGCCGCGATGAT
GGGGACAGCGAGAGAGGCCGCTACAGCAACGGTAACGCCGGCAATGGAGG
TCAGCAGTCCGGGCCGCCGGCCTGGCTGCGAGCCAACATTCGGGTGCGAG
TCATCCATAAGTCGTACGGCGGGGGGCGGGCGTACCTGGGGAAGGGGAGG
GTGGTGGATGTGCCGCGCGTCGGGCAGGCGACCGTTCGAATGGACCTCGG
CGAGCTTGTTCTCGAAGGTGGAAGACGTCCGTCGAGAGCGAAGAGACAAA
AAGGGCAAGAAGAAGCACAAGAAAAGCGGGGGCGGCAGCAGCAGCAGCAG
CAGCAGCAAGCGAGAGCGGAGCAGCGACGGCCGGAGATCCTCCCCCTCAC
CCCGCCGCCGCCGCTCCGACGAGGAAGGCGACCGACACCGCCGACGCGAC
GGACGGAGAGTCGACGATGACGGGGGGAGGGGACGCCGGGATGACATCCC
CTCTAAGAAAAGCCGCCGCGATGATGGGGACAGCGAGAGAGGCCGCTACA
GCAACGGTAACGCCGGCAATGGAGGTCAGCAGTCCGGGCCGCCGGCCTGG
CTGCGAGCCAACATTCGGGTGCGAGTCATCCATAAGTCGTACGGCGGGGG
GCGGGCGTACCTGGGGAAGGGGAGGGTGGTGGATGTGCCGCGCGTCGGGC
AGGCGACCGTTCGAATGGACCTCGGCGAGCTTGTTCTCGAAGGT