Homology
BLAST of mRNA_E-siliculosus-1a_F_contig10543.395.1 vs. uniprot
Match:
D8LCM0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCM0_ECTSI)
HSP 1 Score: 631 bits (1627), Expect = 3.750e-224
Identity = 386/462 (83.55%), Postives = 396/462 (85.71%), Query Frame = 0
Query: 1 MAGQPTVYYVTYTNPADAGGGFVGGGGGSSIGAPHVGWARQQAPEPPPAYPYRGPTAHPXXXXXXXXXXXGXXXXXXXXXAVTQGAAATAPPHGGAPAPAYPGLNAQHCAPCPPAYQAATST-------------------------TVXXXXXXXXXXNGYFPAAPGADSS-DDPSGSRRGXXXXXXXAATEVAHESRKWKWAMFVLGNLISLAVVASEIGELNVCFEENLDEEDDDTPELNASRAYGGLMFTLVLGLLVDFISAVLLSLVYRSPLDIKSAHKIPPGDMRHCGGTCLVHFVAPFSWGLVFWAGGFASLKYGGNAPCGGGTGGDGLESYLRISGALMAVFGTGMLALSFVTLMFACYSSSLSXXXXXXXXXXXXXGCCSRARDAVHKKFMSKSPIFDLAWQVQSVVLSYRAGAVSLASAFLLVSSGVVGEVLAAFGSLAPEEIQELVGPISV 436
MAGQPTVYYVTYTNPA AGG FVGGGG SS+GAPHV ARQQAPEPPPAYPYRG TA+P XXXXXXXXXX XXXXXXXXXAVTQGAAATAPPHGGAPA YPGLNAQH AP PPAYQAAT+T TV GYFPAAPGADSS DDPSGSRRG XXX AATEVA ESRKWKWAMFVLGNLISLAVVASEIGELNVCFEENLDE+DDDTPE NASRAYGGLMFTLVLGLLVDFISAVLLSLVYRSPLDIKS HKIPPGDMRHCGGTCLVHFVAPFSWGLV+WAGG+ S+ YG NAPCGGGTGGDGLESYL ISGALMAVFGTGMLALSFVTLMFAC XXXXXXXXXXXXXGCCS+ARDAVHK+FMSKSPIFDLAWQVQSV+LSYRAGAVSLASAFLLVSSGVVGEVLAAFGSLAPEEIQELVGPISV
Sbjct: 1 MAGQPTVYYVTYTNPASAGGEFVGGGG-SSVGAPHVDRARQQAPEPPPAYPYRGSTAYPPXXXXXXXXXXXXXXXXXXXXAVTQGAAATAPPHGGAPA--YPGLNAQHGAPRPPAYQAATTTVLGXXXXXXXXXXXXXXXXXXXXXTTVPAYPGINVQHRGYFPAAPGADSSSDDPSGSRRGTKXXXEEAATEVARESRKWKWAMFVLGNLISLAVVASEIGELNVCFEENLDEDDDDTPEENASRAYGGLMFTLVLGLLVDFISAVLLSLVYRSPLDIKSTHKIPPGDMRHCGGTCLVHFVAPFSWGLVYWAGGYVSIMYGDNAPCGGGTGGDGLESYLTISGALMAVFGTGMLALSFVTLMFACXXXXXXXXXXXXXXXXXXXGCCSKARDAVHKRFMSKSPIFDLAWQVQSVLLSYRAGAVSLASAFLLVSSGVVGEVLAAFGSLAPEEIQELVGPISV 459
BLAST of mRNA_E-siliculosus-1a_F_contig10543.395.1 vs. uniprot
Match:
A0A6H5JS15_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JS15_9PHAE)
HSP 1 Score: 449 bits (1156), Expect = 1.430e-154
Identity = 258/339 (76.11%), Postives = 269/339 (79.35%), Query Frame = 0
Query: 99 PAYPGLNAQHCAPCPPAYQAATSTTVXXXXXXXXXXNGYFPAAPGADSS-DDPSGSRRGXXXXXXXAATEVAHESRKWKWAMFVLGNLISLAVVASEIGELNVCFEENLDEEDDDTPELNASRAYGGLMFTLVLGLLVDFISAVLLSLVYRSPLDIKSAHKIPPGDMRHCGGTCLVHFVAPFSWGLVFWAGGFASLKYGGNAPCGGGTGGDGLESYLRISGALMAVFGTGMLALSFVTLMFACYSSSLSXXXXXXXXXXXXXGCCSRARDAVHKKFMSKSPIFDLAWQVQSVVLSYRAGAVSLASAFLLVSSGVVGEVLAAFGSLAPEEIQELVGPISV 436
PAYPGLN QH GYFPAAPGADSS DDPSGSRRG A TEVAHESR WKWAMFVLGNLISLAVVASEIGEL+VCFEEN +E+DDDT E NAS A+G LM LVL LLVDFISAVLLSLVYRSPLDIKSAHKIPPGDMRHCGGT LVHFVAPF WGLV++ GG AS YG NAPCGGG GGDG+ESYL+ISG LM VFGTGMLALSFV LM AC XXXXXXXXX GCCSRARDAVHK+ MSKSPIFDLAWQVQSV+LSYRAGAV+LASAFLLVSSGVVGEVLAAFGSLAPEEIQELVGPI V
Sbjct: 23 PAYPGLNVQH--------------------------RGYFPAAPGADSSSDDPSGSRRGMKKKEKEAVTEVAHESRSWKWAMFVLGNLISLAVVASEIGELSVCFEENPEEDDDDTLEENASSAFGALMLNLVLSLLVDFISAVLLSLVYRSPLDIKSAHKIPPGDMRHCGGTFLVHFVAPFFWGLVYFTGGIASSMYGDNAPCGGGNGGDGMESYLKISGILMIVFGTGMLALSFVALMLACXXXXXXXXXXXXXXX----GCCSRARDAVHKRLMSKSPIFDLAWQVQSVLLSYRAGAVNLASAFLLVSSGVVGEVLAAFGSLAPEEIQELVGPIIV 331
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig10543.395.1 vs. uniprot
Analysis Date: 2022-09-16 (
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90 )
Total hits: 2
M A G Q P T V Y Y V T Y T N P A D A G G G F V G G G G G S S I G A P H V G W A R Q Q A P E P P P A Y P Y R G P T A H P P S A P P A H P I S N G A R P P P P A Y P A V T Q G A A A T A P P H G G A P A P A Y P G L N A Q H C A P C P P A Y Q A A T S T T V P A Y P G L N V Q H N G Y F P A A P G A D S S D D P S G S R R G K K K K K E E A A T E V A H E S R K W K W A M F V L G N L I S L A V V A S E I G E L N V C F E E N L D E E D D D T P E L N A S R A Y G G L M F T L V L G L L V D F I S A V L L S L V Y R S P L D I K S A H K I P P G D M R H C G G T C L V H F V A P F S W G L V F W A G G F A S L K Y G G N A P C G G G T G G D G L E S Y L R I S G A L M A V F G T G M L A L S F V T L M F A C Y S S S L S S S S S S S R P P A A R R G C C S R A R D A V H K K F M S K S P I F D L A W Q V Q S V V L S Y R A G A V S L A S A F L L V S S G V V G E V L A A F G S L A P E E I Q E L V G P I S V * 50 100 150 200 250 300 350 400 Expect = 3.75e-224 / Id = 83.55 Expect = 1.43e-154 / Id = 76.11 Sequence D8LCM0_ECTSI A0A6H5JS15_9PHAE
Match Name E-value Identity Description
D8LCM0_ECTSI 3.750e-224 83.55 Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more] A0A6H5JS15_9PHAE 1.430e-154 76.11 Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name:
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
M A G Q P T V Y Y V T Y T N P A D A G G G F V G G G G G S S I G A P H V G W A R Q Q A P E P P P A Y P Y R G P T A H P P S A P P A H P I S N G A R P P P P A Y P A V T Q G A A A T A P P H G G A P A P A Y P G L N A Q H C A P C P P A Y Q A A T S T T V P A Y P G L N V Q H N G Y F P A A P G A D S S D D P S G S R R G K K K K K E E A A T E V A H E S R K W K W A M F V L G N L I S L A V V A S E I G E L N V C F E E N L D E E D D D T P E L N A S R A Y G G L M F T L V L G L L V D F I S A V L L S L V Y R S P L D I K S A H K I P P G D M R H C G G T C L V H F V A P F S W G L V F W A G G F A S L K Y G G N A P C G G G T G G D G L E S Y L R I S G A L M A V F G T G M L A L S F V T L M F A C Y S S S L S S S S S S S R P P A A R R G C C S R A R D A V H K K F M S K S P I F D L A W Q V Q S V V L S Y R A G A V S L A S A F L L V S S G V V G E V L A A F G S L A P E E I Q E L V G P I S V * 50 100 150 200 250 300 350 400 Score = Score = Score = Score = Score = Score = Score = Score = Score = Score = Score = Score = Sequence CYTOPLASMIC_DOMAIN TRANSMEMBRANE NON_CYTOPLASMIC_DOMAIN TRANSMEMBRANE TRANSMEMBRANE CYTOPLASMIC_DOMAIN CYTOPLASMIC_DOMAIN TRANSMEMBRANE NON_CYTOPLASMIC_DOMAIN TMhelix TMhelix TMhelix
IPR Term IPR Description Source Source Term Source Description Alignment
None No IPR available PHOBIUS CYTOPLASMIC_DOMAIN Cytoplasmic domain coord: 247..266 None No IPR available PHOBIUS TRANSMEMBRANE Transmembrane region coord: 319..341 None No IPR available PHOBIUS NON_CYTOPLASMIC_DOMAIN Non cytoplasmic domain coord: 289..318 None No IPR available PHOBIUS TRANSMEMBRANE Transmembrane region coord: 267..288 None No IPR available PHOBIUS TRANSMEMBRANE Transmembrane region coord: 177..196 None No IPR available PHOBIUS CYTOPLASMIC_DOMAIN Cytoplasmic domain coord: 342..436 None No IPR available PHOBIUS CYTOPLASMIC_DOMAIN Cytoplasmic domain coord: 1..176 None No IPR available PHOBIUS TRANSMEMBRANE Transmembrane region coord: 221..246 None No IPR available PHOBIUS NON_CYTOPLASMIC_DOMAIN Non cytoplasmic domain coord: 197..220 None No IPR available TMHMM TMhelix coord: 268..290 None No IPR available TMHMM TMhelix coord: 316..338 None No IPR available TMHMM TMhelix coord: 225..247
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence
>prot_E-siliculosus-1a_F_contig10543.395.1 ID=prot_E-siliculosus-1a_F_contig10543.395.1|Name=mRNA_E-siliculosus-1a_F_contig10543.395.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=437bp back to top