prot_E-siliculosus-1a_F_contig10543.395.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig10543.395.1
Unique Nameprot_E-siliculosus-1a_F_contig10543.395.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length437
Homology
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BLAST of mRNA_E-siliculosus-1a_F_contig10543.395.1 vs. uniprot
Match: D8LCM0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCM0_ECTSI)

HSP 1 Score: 631 bits (1627), Expect = 3.750e-224
Identity = 386/462 (83.55%), Postives = 396/462 (85.71%), Query Frame = 0 
Query:    1 MAGQPTVYYVTYTNPADAGGGFVGGGGGSSIGAPHVGWARQQAPEPPPAYPYRGPTAHPXXXXXXXXXXXGXXXXXXXXXAVTQGAAATAPPHGGAPAPAYPGLNAQHCAPCPPAYQAATST-------------------------TVXXXXXXXXXXNGYFPAAPGADSS-DDPSGSRRGXXXXXXXAATEVAHESRKWKWAMFVLGNLISLAVVASEIGELNVCFEENLDEEDDDTPELNASRAYGGLMFTLVLGLLVDFISAVLLSLVYRSPLDIKSAHKIPPGDMRHCGGTCLVHFVAPFSWGLVFWAGGFASLKYGGNAPCGGGTGGDGLESYLRISGALMAVFGTGMLALSFVTLMFACYSSSLSXXXXXXXXXXXXXGCCSRARDAVHKKFMSKSPIFDLAWQVQSVVLSYRAGAVSLASAFLLVSSGVVGEVLAAFGSLAPEEIQELVGPISV 436
            MAGQPTVYYVTYTNPA AGG FVGGGG SS+GAPHV  ARQQAPEPPPAYPYRG TA+P XXXXXXXXXX XXXXXXXXXAVTQGAAATAPPHGGAPA  YPGLNAQH AP PPAYQAAT+T                         TV           GYFPAAPGADSS DDPSGSRRG  XXX  AATEVA ESRKWKWAMFVLGNLISLAVVASEIGELNVCFEENLDE+DDDTPE NASRAYGGLMFTLVLGLLVDFISAVLLSLVYRSPLDIKS HKIPPGDMRHCGGTCLVHFVAPFSWGLV+WAGG+ S+ YG NAPCGGGTGGDGLESYL ISGALMAVFGTGMLALSFVTLMFAC      XXXXXXXXXXXXXGCCS+ARDAVHK+FMSKSPIFDLAWQVQSV+LSYRAGAVSLASAFLLVSSGVVGEVLAAFGSLAPEEIQELVGPISV
Sbjct:    1 MAGQPTVYYVTYTNPASAGGEFVGGGG-SSVGAPHVDRARQQAPEPPPAYPYRGSTAYPPXXXXXXXXXXXXXXXXXXXXAVTQGAAATAPPHGGAPA--YPGLNAQHGAPRPPAYQAATTTVLGXXXXXXXXXXXXXXXXXXXXXTTVPAYPGINVQHRGYFPAAPGADSSSDDPSGSRRGTKXXXEEAATEVARESRKWKWAMFVLGNLISLAVVASEIGELNVCFEENLDEDDDDTPEENASRAYGGLMFTLVLGLLVDFISAVLLSLVYRSPLDIKSTHKIPPGDMRHCGGTCLVHFVAPFSWGLVYWAGGYVSIMYGDNAPCGGGTGGDGLESYLTISGALMAVFGTGMLALSFVTLMFACXXXXXXXXXXXXXXXXXXXGCCSKARDAVHKRFMSKSPIFDLAWQVQSVLLSYRAGAVSLASAFLLVSSGVVGEVLAAFGSLAPEEIQELVGPISV 459
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BLAST of mRNA_E-siliculosus-1a_F_contig10543.395.1 vs. uniprot
Match: A0A6H5JS15_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JS15_9PHAE)

HSP 1 Score: 449 bits (1156), Expect = 1.430e-154
Identity = 258/339 (76.11%), Postives = 269/339 (79.35%), Query Frame = 0 
Query:   99 PAYPGLNAQHCAPCPPAYQAATSTTVXXXXXXXXXXNGYFPAAPGADSS-DDPSGSRRGXXXXXXXAATEVAHESRKWKWAMFVLGNLISLAVVASEIGELNVCFEENLDEEDDDTPELNASRAYGGLMFTLVLGLLVDFISAVLLSLVYRSPLDIKSAHKIPPGDMRHCGGTCLVHFVAPFSWGLVFWAGGFASLKYGGNAPCGGGTGGDGLESYLRISGALMAVFGTGMLALSFVTLMFACYSSSLSXXXXXXXXXXXXXGCCSRARDAVHKKFMSKSPIFDLAWQVQSVVLSYRAGAVSLASAFLLVSSGVVGEVLAAFGSLAPEEIQELVGPISV 436
            PAYPGLN QH                           GYFPAAPGADSS DDPSGSRRG       A TEVAHESR WKWAMFVLGNLISLAVVASEIGEL+VCFEEN +E+DDDT E NAS A+G LM  LVL LLVDFISAVLLSLVYRSPLDIKSAHKIPPGDMRHCGGT LVHFVAPF WGLV++ GG AS  YG NAPCGGG GGDG+ESYL+ISG LM VFGTGMLALSFV LM AC      XXXXXXXXX    GCCSRARDAVHK+ MSKSPIFDLAWQVQSV+LSYRAGAV+LASAFLLVSSGVVGEVLAAFGSLAPEEIQELVGPI V
Sbjct:   23 PAYPGLNVQH--------------------------RGYFPAAPGADSSSDDPSGSRRGMKKKEKEAVTEVAHESRSWKWAMFVLGNLISLAVVASEIGELSVCFEENPEEDDDDTLEENASSAFGALMLNLVLSLLVDFISAVLLSLVYRSPLDIKSAHKIPPGDMRHCGGTFLVHFVAPFFWGLVYFTGGIASSMYGDNAPCGGGNGGDGMESYLKISGILMIVFGTGMLALSFVALMLACXXXXXXXXXXXXXXX----GCCSRARDAVHKRLMSKSPIFDLAWQVQSVLLSYRAGAVNLASAFLLVSSGVVGEVLAAFGSLAPEEIQELVGPIIV 331
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig10543.395.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LCM0_ECTSI3.750e-22483.55Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JS15_9PHAE1.430e-15476.11Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 247..266
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 319..341
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 289..318
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 267..288
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 177..196
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 342..436
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..176
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 221..246
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 197..220
NoneNo IPR availableTMHMMTMhelixcoord: 268..290
NoneNo IPR availableTMHMMTMhelixcoord: 316..338
NoneNo IPR availableTMHMMTMhelixcoord: 225..247

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig10543contigE-siliculosus-1a_F_contig10543:586..2282 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig10543.395.1mRNA_E-siliculosus-1a_F_contig10543.395.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig10543 586..2282 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig10543.395.1 ID=prot_E-siliculosus-1a_F_contig10543.395.1|Name=mRNA_E-siliculosus-1a_F_contig10543.395.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=437bp
MAGQPTVYYVTYTNPADAGGGFVGGGGGSSIGAPHVGWARQQAPEPPPAY
PYRGPTAHPPSAPPAHPISNGARPPPPAYPAVTQGAAATAPPHGGAPAPA
YPGLNAQHCAPCPPAYQAATSTTVPAYPGLNVQHNGYFPAAPGADSSDDP
SGSRRGKKKKKEEAATEVAHESRKWKWAMFVLGNLISLAVVASEIGELNV
CFEENLDEEDDDTPELNASRAYGGLMFTLVLGLLVDFISAVLLSLVYRSP
LDIKSAHKIPPGDMRHCGGTCLVHFVAPFSWGLVFWAGGFASLKYGGNAP
CGGGTGGDGLESYLRISGALMAVFGTGMLALSFVTLMFACYSSSLSSSSS
SSRPPAARRGCCSRARDAVHKKFMSKSPIFDLAWQVQSVVLSYRAGAVSL
ASAFLLVSSGVVGEVLAAFGSLAPEEIQELVGPISV*
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