prot_E-siliculosus-1a_M_contig98.17732.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig98.17732.1
Unique Nameprot_E-siliculosus-1a_M_contig98.17732.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length75
Homology
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BLAST of mRNA_E-siliculosus-1a_M_contig98.17732.1 vs. uniprot
Match: D8LGJ8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGJ8_ECTSI)

HSP 1 Score: 70.1 bits (170), Expect = 2.610e-14
Identity = 41/48 (85.42%), Postives = 43/48 (89.58%), Query Frame = 0 
Query:   15 MKGGAAQ-SSEISANALPDVGGAAWAFVVVVGALSRVASSSRGFLPVG 61
            MKGGAAQ SS+ISANALPDVGGAAWAFVVVVGAL+RV SSSR FL  G
Sbjct:    1 MKGGAAQQSSQISANALPDVGGAAWAFVVVVGALTRVVSSSRFFLAGG 48
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig98.17732.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LGJ8_ECTSI2.610e-1485.42Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..13
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 21..35
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 59..75
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 14..20
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 36..58

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig98contigE-siliculosus-1a_M_contig98:636691..636915 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig98.17732.1mRNA_E-siliculosus-1a_M_contig98.17732.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig98 636689..636915 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig98.17732.1 ID=prot_E-siliculosus-1a_M_contig98.17732.1|Name=mRNA_E-siliculosus-1a_M_contig98.17732.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=75bp
RGASAGLFGCAVLQMKGGAAQSSEISANALPDVGGAAWAFVVVVGALSRV
ASSSRGFLPVGGRSRSPLGNGEKTP
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