Homology
BLAST of mRNA_E-siliculosus-1a_M_contig98.17732.1 vs. uniprot
Match:
D8LGJ8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGJ8_ECTSI)
HSP 1 Score: 70.1 bits (170), Expect = 2.610e-14
Identity = 41/48 (85.42%), Postives = 43/48 (89.58%), Query Frame = 0
Query: 15 MKGGAAQ-SSEISANALPDVGGAAWAFVVVVGALSRVASSSRGFLPVG 61
MKGGAAQ SS+ISANALPDVGGAAWAFVVVVGAL+RV SSSR FL G
Sbjct: 1 MKGGAAQQSSQISANALPDVGGAAWAFVVVVGALTRVVSSSRFFLAGG 48
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29
R G A S A G L F G C A V L Q M K G G A A Q S S E I S A N A L P D V G G A A W A F V V V V G A L S R V A S S S R G F L P V G G R S R S P L G N G E K T P 10 20 30 40 50 60 70 Score = Score = Score = Score = Score = Score = Score = Sequence SIGNAL_PEPTIDE_H_REGION NON_CYTOPLASMIC_DOMAIN SIGNAL_PEPTIDE SIGNAL_PEPTIDE_N_REGION CYTOPLASMIC_DOMAIN SIGNAL_PEPTIDE_C_REGION TRANSMEMBRANE
IPR Term IPR Description Source Source Term Source Description Alignment
None No IPR available PHOBIUS SIGNAL_PEPTIDE_H_REGION Signal peptide H-region coord: 3..13 None No IPR available PHOBIUS NON_CYTOPLASMIC_DOMAIN Non cytoplasmic domain coord: 21..35 None No IPR available PHOBIUS SIGNAL_PEPTIDE Signal Peptide coord: 1..20 None No IPR available PHOBIUS SIGNAL_PEPTIDE_N_REGION Signal peptide N-region coord: 1..2 None No IPR available PHOBIUS CYTOPLASMIC_DOMAIN Cytoplasmic domain coord: 59..75 None No IPR available PHOBIUS SIGNAL_PEPTIDE_C_REGION Signal peptide C-region coord: 14..20 None No IPR available PHOBIUS TRANSMEMBRANE Transmembrane region coord: 36..58
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence
>prot_E-siliculosus-1a_M_contig98.17732.1 ID=prot_E-siliculosus-1a_M_contig98.17732.1|Name=mRNA_E-siliculosus-1a_M_contig98.17732.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=75bp back to top