Homology
BLAST of mRNA_E-siliculosus-1a_F_contig105.358.1 vs. uniprot
Match:
D8LSE7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LSE7_ECTSI)
HSP 1 Score: 480 bits (1235), Expect = 1.050e-156
Identity = 555/621 (89.37%), Postives = 559/621 (90.02%), Query Frame = 0
Query: 168 RLGTRLNRPRSGGRGRHGXXXXXXXXXXXXXNAPNGGRKERAVKSTPEGASWRDSDLDGKSRSFLFVKEIKAIPKWNGERVMNVLKEAQRLSEAS-----GDGGGAADTRRGLEMTSFMYNACISHMSSCGRWQQALEILELMRAADFPPDEFCVTAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAGDGTRYEIDRVSXXXXXXXXXXXXXXXXXXXXXXXMTHPXXXXXXXXXXXXXXXXXXRGEV----RVSADMISYNTIIDVCKKCGPWEEAVKLLREMSTPGNGRGXXXXXXXXXXXXVIIPNVVTYTSAIVACGRSGHWDEALELFREMKAVGIQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGLDVLRTTMXXXXXXXXXXXXXXXXXXXXVSKEWGKVRGVVEEMAVERGLSPNAACLTDLVVVGVKTGQWEDLLETLEKLEKGGILPKDPEIGQAAVTAARACGKDQAEQLRLAEILTRTRHQN 779
RLGTRLNRPRSGGRGRHGXXXXXXXXXX NAPNGGRKERAVKSTPEGASWRDSDLDGKSRSFLFVKEIKAIPKWNGERVMNVLKEAQRLSEA+ GDGGGAAD RRGLEMTSFMYNACISHMSSCGRWQQALEILELMRAADFPPDEFCVTAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAGDGTRYEIDRVSXXXXXXXXXXXXXXXXXXXXXXXMTHPXXXXXXXXXXXXXXXXXX RV+ADMI+YNTIIDVCKKCGPWEEAVKLLREMSTPGNG G VIIPNV VGIQ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGLDVLRTTMXXXXXXXXXXXXXXXXXXXXVSKEWGKVRGVVEEMAVERGLSPNAACLTDLVVVGVKTGQWEDLLETLEKLE+GGILPKDPEIGQAAVTAAR CGKDQAEQLRLAEI TRTRHQN
Sbjct: 50 RLGTRLNRPRSGGRGRHGXXXXXXXXXXS--NAPNGGRKERAVKSTPEGASWRDSDLDGKSRSFLFVKEIKAIPKWNGERVMNVLKEAQRLSEAAAAAAPGDGGGAADARRGLEMTSFMYNACISHMSSCGRWQQALEILELMRAADFPPDEFCVTAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAGDGTRYEIDRVSXXXXXXXXXXXXXXXXXXXXXXXMTHPXXXXXXXXXXXXXXXXXXXXXXXXXGRVTADMIAYNTIIDVCKKCGPWEEAVKLLREMSTPGNGGGGSGSGG------VIIPNVXXXXXXXXXXXXXXXXXXXXXXXXXXXTVGIQPDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGLDVLRTTMXXXXXXXXXXXXXXXXXXXXVSKEWGKVRGVVEEMAVERGLSPNAACLTDLVVVGVKTGQWEDLLETLEKLEEGGILPKDPEIGQAAVTAARTCGKDQAEQLRLAEIFTRTRHQN 662
BLAST of mRNA_E-siliculosus-1a_F_contig105.358.1 vs. uniprot
Match:
I2CQP9_NANGC (PPR_long domain-containing protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=I2CQP9_NANGC)
HSP 1 Score: 59.7 bits (143), Expect = 2.290e-5
Identity = 34/98 (34.69%), Postives = 48/98 (48.98%), Query Frame = 0
Query: 511 VSADMISYNTIIDVCKKCGPWEEAVKLLREMSTPGNGRGXXXXXXXXXXXX-------------VIIPNVVTYTSAIVACGRSGHWDEALELFREMKA 595
+ ++ISYNT I+ C K G +EEA+ +LR M P + V P++VTY SAI ACG +G W+ AL L E++A
Sbjct: 377 IRPNIISYNTAIEACAKRGRFEEALAILRSMQVPDTEKAGGHVPLPSASKKRNGASHHRRHQRLVPEPDLVTYHSAIKACGHAGQWEHALSLLAEVRA 474
BLAST of mRNA_E-siliculosus-1a_F_contig105.358.1 vs. uniprot
Match:
K8YNC8_NANGC (Uncharacterized protein (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8YNC8_NANGC)
HSP 1 Score: 55.5 bits (132), Expect = 9.460e-5
Identity = 28/92 (30.43%), Postives = 49/92 (53.26%), Query Frame = 0
Query: 506 RGEVRVSADMISYNTIIDVCKKCGPWEEAVKLLREMSTPGNGRGXXXXXXXXXXXXVIIPNVVTYTSAIVACGRSGHWDEALELFREMKAVG 597
R + D+ +YN ++ ++ G E +K+L +M + G I P+VVTY++A+ ACG +G W++AL L +EM ++G
Sbjct: 40 RSRFGLEPDLRAYNVAANLHRRAGDLAEVLKILEDMKQNKSLSG-------------IAPDVVTYSTALAACGEAGKWEKALSLLKEMSSLG 118
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig105.358.1 vs. uniprot
Analysis Date: 2022-09-16 (
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90 )
Total hits: 3
M A L I S S L G T A A A A S T A A S A A A S A A V T A V T I P P H T R D C R I A S S L G V R A N P T P A A A A A A A A A A G S T T V C W V P P P G R L H S S E Q R R R R R R R W I G V G A R P E L S P A D P V S P P A R C R D A T R H A G T A M G G A A D C G G G S N G S F H R R T G G G G L R R L E A H R S S T I A A E T K A S G G G G G G R L G T R L N R P R S G G R G R H G G K G G G G G G G G R G S N A P N G G R K E R A V K S T P E G A S W R D S D L D G K S R S F L F V K E I K A I P K W N G E R V M N V L K E A Q R L S E A S G D G G G A A D T R R G L E M T S F M Y N A C I S H M S S C G R W Q Q A L E I L E L M R A A D F P P D E F C V T A A I T A C G R A G Q W Q K S L D L L D G L R A D G G R T T L R L M N A V V D A C R K G R Q W E K A L E K L S E M K G F G V V P D D F T Y T A A I A A C R Q G R Q W D K A L E L F R E M P E A G V I V T S I H Y N V A I A I C G E A K Q P E R A F E M F R E M Q G A G D G T R Y E I D R V S Y N T A I I A C G E G G S W D L A F K L F R E M T H P P P P P T A A E A G G D A A A A R R R G E V R V S A D M I S Y N T I I D V C K K C G P W E E A V K L L R E M S T P G N G R G G G G G G S G G G G G G V I I P N V V T Y T S A I V A C G R S G H W D E A L E L F R E M K A V G I Q P D A I S Y N T A I S V S G E A G R W R D G L A L L E E M P G E G I K P D H T T Y S T A I L L C G R C G Q L E A G L D V L R T T M P S H G A T P N V L N Y S A A S V I C A V S K E W G K V R G V V E E M A V E R G L S P N A A C L T D L V V V G V K T G Q W E D L L E T L E K L E K G G I L P K D P E I G Q A A V T A A R A C G K D Q A E Q L R L A E I L T R T R H Q N * 100 200 300 400 500 600 700 Expect = 1.05e-156 / Id = 89.37 Expect = 2.29e-5 / Id = 34.69 Expect = 9.46e-5 / Id = 30.43 Sequence D8LSE7_ECTSI I2CQP9_NANGC K8YNC8_NANGC
Match Name E-value Identity Description
D8LSE7_ECTSI 1.050e-156 89.37 Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more] I2CQP9_NANGC 2.290e-5 34.69 PPR_long domain-containing protein n=3 Tax=Monodop... [more] K8YNC8_NANGC 9.460e-5 30.43 Uncharacterized protein (Fragment) n=1 Tax=Nannoch... [more]
back to top
InterPro
Analysis Name:
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
M A L I S S L G T A A A A S T A A S A A A S A A V T A V T I P P H T R D C R I A S S L G V R A N P T P A A A A A A A A A A G S T T V C W V P P P G R L H S S E Q R R R R R R R W I G V G A R P E L S P A D P V S P P A R C R D A T R H A G T A M G G A A D C G G G S N G S F H R R T G G G G L R R L E A H R S S T I A A E T K A S G G G G G G R L G T R L N R P R S G G R G R H G G K G G G G G G G G R G S N A P N G G R K E R A V K S T P E G A S W R D S D L D G K S R S F L F V K E I K A I P K W N G E R V M N V L K E A Q R L S E A S G D G G G A A D T R R G L E M T S F M Y N A C I S H M S S C G R W Q Q A L E I L E L M R A A D F P P D E F C V T A A I T A C G R A G Q W Q K S L D L L D G L R A D G G R T T L R L M N A V V D A C R K G R Q W E K A L E K L S E M K G F G V V P D D F T Y T A A I A A C R Q G R Q W D K A L E L F R E M P E A G V I V T S I H Y N V A I A I C G E A K Q P E R A F E M F R E M Q G A G D G T R Y E I D R V S Y N T A I I A C G E G G S W D L A F K L F R E M T H P P P P P T A A E A G G D A A A A R R R G E V R V S A D M I S Y N T I I D V C K K C G P W E E A V K L L R E M S T P G N G R G G G G G G S G G G G G G V I I P N V V T Y T S A I V A C G R S G H W D E A L E L F R E M K A V G I Q P D A I S Y N T A I S V S G E A G R W R D G L A L L E E M P G E G I K P D H T T Y S T A I L L C G R C G Q L E A G L D V L R T T M P S H G A T P N V L N Y S A A S V I C A V S K E W G K V R G V V E E M A V E R G L S P N A A C L T D L V V V G V K T G Q W E D L L E T L E K L E K G G I L P K D P E I G Q A A V T A A R A C G K D Q A E Q L R L A E I L T R T R H Q N * 100 200 300 400 500 600 700 Expect = 0.011 / Score = 16.0 Expect = 0.6 / Score = 10.5 Expect = 0.015 / Score = 15.5 Expect = 1.4E-5 / Score = 25.0 Expect = 9.2E-4 / Score = 19.3 Expect = 4.4E-4 / Score = 20.3 Expect = 4.9E-6 / Score = 26.4 Expect = 8.3E-6 / Score = 23.7 Expect = 4.5E-5 / Score = 21.4 Expect = 2.3E-6 / Score = 25.4 Expect = 5.1E-4 / Score = 18.0 Expect = 8.3E-5 / Score = 20.5 Expect = 5.9E-5 / Score = 21.0 Expect = 1.7E-9 / Score = 35.2 Expect = 1.2E-5 / Score = 23.2 Expect = 4.1E-12 / Score = 46.1 Score = 5.579 Score = 7.125 Score = 10.161 Score = 7.706 Score = 9.876 Score = 11.137 Score = 8.407 Score = 10.15 Score = 11.268 Score = 13.778 Score = 9.547 Score = 8.977 Expect = 3.0E-16 / Score = 61.2 Expect = 1.1E-33 / Score = 118.2 Expect = 2.6E-10 / Score = 41.9 Expect = 1.1E-30 / Score = 109.3 Score = Score = Score = Score = Score = Score = Score = Score = Score = 0.508 Sequence PF01535 TIGR00756 PF13041 PS51375 PS51375 PS51375 PS51375 PS51375 PS51375 PS51375 PS51375 PS51375 PS51375 PS51375 PS51375 G3DSA:1.25.40.10 G3DSA:1.25.40.10 PTHR46128 SIGNAL_PEPTIDE_N_REGION SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION NON_CYTOPLASMIC_DOMAIN SIGNAL_PEPTIDE_H_REGION SignalP-noTM
IPR Term IPR Description Source Source Term Source Description Alignment
IPR002885 Pentatricopeptide repeat PFAM PF01535 PPR coord: 459..484 IPR002885 Pentatricopeptide repeat TIGRFAM TIGR00756 TIGR00756 coord: 385..417 IPR002885 Pentatricopeptide repeat PFAM PF13041 PPR_2 coord: 565..609 IPR002885 Pentatricopeptide repeat PROSITE PS51375 PPR coord: 672..707 IPR002885 Pentatricopeptide repeat PROSITE PS51375 PPR coord: 708..742 IPR002885 Pentatricopeptide repeat PROSITE PS51375 PPR coord: 514..548 IPR002885 Pentatricopeptide repeat PROSITE PS51375 PPR coord: 313..347 IPR002885 Pentatricopeptide repeat PROSITE PS51375 PPR coord: 457..491 IPR002885 Pentatricopeptide repeat PROSITE PS51375 PPR coord: 383..417 IPR002885 Pentatricopeptide repeat PROSITE PS51375 PPR coord: 418..452 IPR002885 Pentatricopeptide repeat PROSITE PS51375 PPR coord: 278..312 IPR002885 Pentatricopeptide repeat PROSITE PS51375 PPR coord: 601..635 IPR002885 Pentatricopeptide repeat PROSITE PS51375 PPR coord: 566..600 IPR002885 Pentatricopeptide repeat PROSITE PS51375 PPR coord: 348..382 IPR002885 Pentatricopeptide repeat PROSITE PS51375 PPR coord: 636..671 IPR011990 Tetratricopeptide-like helical domain superfamily GENE3D 1.25.40.10 coord: 645..760 IPR011990 Tetratricopeptide-like helical domain superfamily GENE3D 1.25.40.10 coord: 363..496 None No IPR available PANTHER PTHR46128 FAMILY NOT NAMED coord: 352..485 None No IPR available PHOBIUS SIGNAL_PEPTIDE_N_REGION Signal peptide N-region coord: 1..1 None No IPR available PHOBIUS SIGNAL_PEPTIDE Signal Peptide coord: 1..23 None No IPR available PHOBIUS SIGNAL_PEPTIDE_C_REGION Signal peptide C-region coord: 14..23 None No IPR available PHOBIUS NON_CYTOPLASMIC_DOMAIN Non cytoplasmic domain coord: 24..779 None No IPR available PHOBIUS SIGNAL_PEPTIDE_H_REGION Signal peptide H-region coord: 2..13 None No IPR available SIGNALP_EUK SignalP-noTM SignalP-noTM coord: 1..12
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence
>prot_E-siliculosus-1a_F_contig105.358.1 ID=prot_E-siliculosus-1a_F_contig105.358.1|Name=mRNA_E-siliculosus-1a_F_contig105.358.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=780bp back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
Term Definition
IPR011990 TPR-like_helical_dom_sf IPR002885 Pentatricopeptide_repeat