Homology
BLAST of mRNA_E-siliculosus-1a_M_contig96.17620.1 vs. uniprot
Match:
Q6XM58_9PHYC (FirrV-1-A29 n=1 Tax=Feldmannia irregularis virus a TaxID=231992 RepID=Q6XM58_9PHYC)
HSP 1 Score: 95.9 bits (237), Expect = 2.880e-23
Identity = 51/107 (47.66%), Postives = 71/107 (66.36%), Query Frame = 0
Query: 9 FAMCRDLCSRSQHSRFHHGAVTVLRRGHRVLGKGSNRHNAHAEVSSIKAIPQYQRHDNLVVYVCRVNSSGRFMNSRPCLNCLTFMKANHVTRVFFTDGLG-FTKINL 114
F C+ L SQH F HGA+ R ++GKGSNR + HAEVS+++ + Q +H L VYVCRVN+ G+FMNS+PC NC+ +MK V RV+++D G F+K+ L
Sbjct: 9 FLECQHLAKFSQHPVFRHGALVTNRTT--IVGKGSNRSSLHAEVSALQNV-QGGQHMRLRVYVCRVNARGKFMNSKPCQNCMNYMKHRGVYRVYYSDDAGGFSKLVL 112
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig96.17620.1 vs. uniprot
Analysis Date: 2022-09-16 (
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90 )
Total hits: 1
M K R Q H T D Y F A M C R D L C S R S Q H S R F H H G A V T V L R R G H R V L G K G S N R H N A H A E V S S I K A I P Q Y Q R H D N L V V Y V C R V N S S G R F M N S R P C L N C L T F M K A N H V T R V F F T D G L G F T K I N L * 10 20 30 40 50 60 70 80 90 100 110 Expect = 2.88e-23 / Id = 47.66 Sequence Q6XM58_9PHYC
Match Name E-value Identity Description
Q6XM58_9PHYC 2.880e-23 47.66 FirrV-1-A29 n=1 Tax=Feldmannia irregularis virus a... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29
M K R Q H T D Y F A M C R D L C S R S Q H S R F H H G A V T V L R R G H R V L G K G S N R H N A H A E V S S I K A I P Q Y Q R H D N L V V Y V C R V N S S G R F M N S R P C L N C L T F M K A N H V T R V F F T D G L G F T K I N L * 10 20 30 40 50 60 70 80 90 100 110 Expect = 2.5E-10 / Score = 42.2 Expect = 2.6E-8 / Score = 33.7 Score = Sequence G3DSA:3.40.140.10 PF00383 SSF53927
IPR Term IPR Description Source Source Term Source Description Alignment
None No IPR available GENE3D 3.40.140.10 coord: 1..112 IPR002125 Cytidine and deoxycytidylate deaminase domain PFAM PF00383 dCMP_cyt_deam_1 coord: 3..103 IPR016193 Cytidine deaminase-like SUPERFAMILY 53927 Cytidine deaminase-like coord: 5..105
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence
>prot_E-siliculosus-1a_M_contig96.17620.1 ID=prot_E-siliculosus-1a_M_contig96.17620.1|Name=mRNA_E-siliculosus-1a_M_contig96.17620.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=115bp back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
Term Definition
IPR016193 Cytidine_deaminase-like IPR002125 CMP_dCMP_dom