Homology
BLAST of mRNA_E-siliculosus-1a_M_contig94.17423.1 vs. uniprot
Match:
A0A6H5JH51_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JH51_9PHAE)
HSP 1 Score: 1294 bits (3348), Expect = 0.000e+0
Identity = 663/684 (96.93%), Postives = 677/684 (98.98%), Query Frame = 0
Query: 1 MSQHKHFTVEQIVYEGHIDLGENLWEKLGRPVGMPHLEERDLKLLDEAISILNPPEAHVRVVEVDTFTESERSIVKGSARIGHGDFSLRQMTAIFKRASPSGLGIAELTATNDDESKAEEGDVATEDMTPEAAAAALRVSEREKQEEAMKKPPKLPEIILFWGRNMRRGGNLVVCPGESSMDRLIQAYLVCEVVQDSKLFDKSVTSFSERVTTERKGGLMGVELGETSTAEQDALENLISDYSFHDASIGIISLVASIYYFFVLARNHVNVLTLLAVAVVAGLNQEATWPWVFKHILLCARMKDPIVRVSQCRLVRHHQGQLSGQGFLAIGLAAFGVYLEVFPTTDGDTPLLFRILLNGFQAAMVAVLVVNMVQAVEPMDISRVSPKDRLRPWARKYLDDNVFDTKWYLTLLVGVLWSGAVAVTIYVGLSYEIEGLGYTIPVICLIVLGLSIAAVNPGMALLGAWGFIWLVPVGLAFVCRSAFDTTLMLINKVSLTWRRMANEVVSHARDSAQGEFSVRDILKFLLQVLPLTPLFLVSLPIPVLYFFVWFIHLSMRVLLRVADALSAPALDFRLHPILSDYGSVTWKMDRLSMDVENRSMRTLLMARIDKLMESTSATLGERSRSGVIPNRPYWHLSKTSANRLGCIAVKIGTGEEQSSKTLLVSPDYIPDKPLAHADAPASVC 684
MSQHKHFTVEQIVYEGHIDLGENLWEKLGRPVGMPHLEERDLKLLDEAIS+LNPPEAHVRVVEVDTFTESERSIVKGSARIGHGDFSLRQMTAIFKRASPSGLGIAELTATNDDESKAEE DVA ED+TPEAAAAALRVSER+K+EEAMKKPPKLPEIILFWGRNMRRGGNL+VCPGESSMDRLIQAYLVCEVVQDSKLFDKSVTSF ERVTTERKGGLMGVELGETSTAEQDALENLISDYSFHDASIGIISLVASIYYFFVLARNHVNVLTLLAVAVVAGLNQEATWPWVFKHILLCARMKDPIVRVSQCRLVRHHQGQLSGQGFLAIGLAAFGVYLEVFPTTDGDTPLLFRILLNGFQAAMVAVLVVNMVQAVEPMD+SRVSPKDRLRPWARKYLDDNVFDTKWYLTLLVGVLWSG V VTI+VG+S+E EGLGYTIPVICLIVLGLSIAAVNPGMALLGAWGFIWLVPVGLAFVCRSAFDT LMLINKVSLTWRRMANEVVSHARDSA+GEFSVRDILKFLLQVLPLTPLFLVSLPIP+LYFFVWFIHLSMRVLLRVADALSAPALDFRLHPILSDYGSVTWKMDRLSMDVENRSMRTLLMARIDKLMESTSATLGERSRSGVIP+RPYWHLSKTSANRLGCIAVKIGTGEE++SKTLLVSPDYIPDKPLAHADAPASVC
Sbjct: 1 MSQHKHFTVEQIVYEGHIDLGENLWEKLGRPVGMPHLEERDLKLLDEAISLLNPPEAHVRVVEVDTFTESERSIVKGSARIGHGDFSLRQMTAIFKRASPSGLGIAELTATNDDESKAEESDVAPEDLTPEAAAAALRVSERDKEEEAMKKPPKLPEIILFWGRNMRRGGNLIVCPGESSMDRLIQAYLVCEVVQDSKLFDKSVTSFRERVTTERKGGLMGVELGETSTAEQDALENLISDYSFHDASIGIISLVASIYYFFVLARNHVNVLTLLAVAVVAGLNQEATWPWVFKHILLCARMKDPIVRVSQCRLVRHHQGQLSGQGFLAIGLAAFGVYLEVFPTTDGDTPLLFRILLNGFQAAMVAVLVVNMVQAVEPMDMSRVSPKDRLRPWARKYLDDNVFDTKWYLTLLVGVLWSGGVTVTIFVGVSHEFEGLGYTIPVICLIVLGLSIAAVNPGMALLGAWGFIWLVPVGLAFVCRSAFDTALMLINKVSLTWRRMANEVVSHARDSARGEFSVRDILKFLLQVLPLTPLFLVSLPIPLLYFFVWFIHLSMRVLLRVADALSAPALDFRLHPILSDYGSVTWKMDRLSMDVENRSMRTLLMARIDKLMESTSATLGERSRSGVIPSRPYWHLSKTSANRLGCIAVKIGTGEEENSKTLLVSPDYIPDKPLAHADAPASVC 684
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig94.17423.1 vs. uniprot
Analysis Date: 2022-09-16 (
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90 )
Total hits: 1
M S Q H K H F T V E Q I V Y E G H I D L G E N L W E K L G R P V G M P H L E E R D L K L L D E A I S I L N P P E A H V R V V E V D T F T E S E R S I V K G S A R I G H G D F S L R Q M T A I F K R A S P S G L G I A E L T A T N D D E S K A E E G D V A T E D M T P E A A A A A L R V S E R E K Q E E A M K K P P K L P E I I L F W G R N M R R G G N L V V C P G E S S M D R L I Q A Y L V C E V V Q D S K L F D K S V T S F S E R V T T E R K G G L M G V E L G E T S T A E Q D A L E N L I S D Y S F H D A S I G I I S L V A S I Y Y F F V L A R N H V N V L T L L A V A V V A G L N Q E A T W P W V F K H I L L C A R M K D P I V R V S Q C R L V R H H Q G Q L S G Q G F L A I G L A A F G V Y L E V F P T T D G D T P L L F R I L L N G F Q A A M V A V L V V N M V Q A V E P M D I S R V S P K D R L R P W A R K Y L D D N V F D T K W Y L T L L V G V L W S G A V A V T I Y V G L S Y E I E G L G Y T I P V I C L I V L G L S I A A V N P G M A L L G A W G F I W L V P V G L A F V C R S A F D T T L M L I N K V S L T W R R M A N E V V S H A R D S A Q G E F S V R D I L K F L L Q V L P L T P L F L V S L P I P V L Y F F V W F I H L S M R V L L R V A D A L S A P A L D F R L H P I L S D Y G S V T W K M D R L S M D V E N R S M R T L L M A R I D K L M E S T S A T L G E R S R S G V I P N R P Y W H L S K T S A N R L G C I A V K I G T G E E Q S S K T L L V S P D Y I P D K P L A H A D A P A S V C * 100 200 300 400 500 600 Expect = 0.00e+0 / Id = 96.93 Sequence A0A6H5JH51_9PHAE
Match Name E-value Identity Description
A0A6H5JH51_9PHAE 0.000e+0 96.93 Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29
M S Q H K H F T V E Q I V Y E G H I D L G E N L W E K L G R P V G M P H L E E R D L K L L D E A I S I L N P P E A H V R V V E V D T F T E S E R S I V K G S A R I G H G D F S L R Q M T A I F K R A S P S G L G I A E L T A T N D D E S K A E E G D V A T E D M T P E A A A A A L R V S E R E K Q E E A M K K P P K L P E I I L F W G R N M R R G G N L V V C P G E S S M D R L I Q A Y L V C E V V Q D S K L F D K S V T S F S E R V T T E R K G G L M G V E L G E T S T A E Q D A L E N L I S D Y S F H D A S I G I I S L V A S I Y Y F F V L A R N H V N V L T L L A V A V V A G L N Q E A T W P W V F K H I L L C A R M K D P I V R V S Q C R L V R H H Q G Q L S G Q G F L A I G L A A F G V Y L E V F P T T D G D T P L L F R I L L N G F Q A A M V A V L V V N M V Q A V E P M D I S R V S P K D R L R P W A R K Y L D D N V F D T K W Y L T L L V G V L W S G A V A V T I Y V G L S Y E I E G L G Y T I P V I C L I V L G L S I A A V N P G M A L L G A W G F I W L V P V G L A F V C R S A F D T T L M L I N K V S L T W R R M A N E V V S H A R D S A Q G E F S V R D I L K F L L Q V L P L T P L F L V S L P I P V L Y F F V W F I H L S M R V L L R V A D A L S A P A L D F R L H P I L S D Y G S V T W K M D R L S M D V E N R S M R T L L M A R I D K L M E S T S A T L G E R S R S G V I P N R P Y W H L S K T S A N R L G C I A V K I G T G E E Q S S K T L L V S P D Y I P D K P L A H A D A P A S V C * 100 200 300 400 500 600 Score = Score = Score = Score = Score = Score = Score = Score = Score = Score = Score = Score = Score = Score = Score = Score = Score = Score = Score = Score = Score = Score = Score = Score = Score = Sequence TRANSMEMBRANE NON_CYTOPLASMIC_DOMAIN TRANSMEMBRANE TRANSMEMBRANE TRANSMEMBRANE TRANSMEMBRANE NON_CYTOPLASMIC_DOMAIN TRANSMEMBRANE CYTOPLASMIC_DOMAIN CYTOPLASMIC_DOMAIN NON_CYTOPLASMIC_DOMAIN TRANSMEMBRANE CYTOPLASMIC_DOMAIN CYTOPLASMIC_DOMAIN TRANSMEMBRANE NON_CYTOPLASMIC_DOMAIN CYTOPLASMIC_DOMAIN TMhelix TMhelix TMhelix TMhelix TMhelix TMhelix TMhelix TMhelix
IPR Term IPR Description Source Source Term Source Description Alignment
None No IPR available PHOBIUS TRANSMEMBRANE Transmembrane region coord: 351..373 None No IPR available PHOBIUS NON_CYTOPLASMIC_DOMAIN Non cytoplasmic domain coord: 340..350 None No IPR available PHOBIUS TRANSMEMBRANE Transmembrane region coord: 407..429 None No IPR available PHOBIUS TRANSMEMBRANE Transmembrane region coord: 271..293 None No IPR available PHOBIUS TRANSMEMBRANE Transmembrane region coord: 524..551 None No IPR available PHOBIUS TRANSMEMBRANE Transmembrane region coord: 247..265 None No IPR available PHOBIUS NON_CYTOPLASMIC_DOMAIN Non cytoplasmic domain coord: 484..523 None No IPR available PHOBIUS TRANSMEMBRANE Transmembrane region coord: 322..339 None No IPR available PHOBIUS CYTOPLASMIC_DOMAIN Cytoplasmic domain coord: 374..406 None No IPR available PHOBIUS CYTOPLASMIC_DOMAIN Cytoplasmic domain coord: 294..321 None No IPR available PHOBIUS NON_CYTOPLASMIC_DOMAIN Non cytoplasmic domain coord: 266..270 None No IPR available PHOBIUS TRANSMEMBRANE Transmembrane region coord: 462..483 None No IPR available PHOBIUS CYTOPLASMIC_DOMAIN Cytoplasmic domain coord: 456..461 None No IPR available PHOBIUS CYTOPLASMIC_DOMAIN Cytoplasmic domain coord: 552..684 None No IPR available PHOBIUS TRANSMEMBRANE Transmembrane region coord: 435..455 None No IPR available PHOBIUS NON_CYTOPLASMIC_DOMAIN Non cytoplasmic domain coord: 430..434 None No IPR available PHOBIUS CYTOPLASMIC_DOMAIN Cytoplasmic domain coord: 1..246 None No IPR available TMHMM TMhelix coord: 271..293 None No IPR available TMHMM TMhelix coord: 242..264 None No IPR available TMHMM TMhelix coord: 528..550 None No IPR available TMHMM TMhelix coord: 461..483 None No IPR available TMHMM TMhelix coord: 436..455 None No IPR available TMHMM TMhelix coord: 322..344 None No IPR available TMHMM TMhelix coord: 351..373 None No IPR available TMHMM TMhelix coord: 407..429
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence
>prot_E-siliculosus-1a_M_contig94.17423.1 ID=prot_E-siliculosus-1a_M_contig94.17423.1|Name=mRNA_E-siliculosus-1a_M_contig94.17423.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=685bp back to top