prot_E-siliculosus-1a_M_contig94.17423.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_E-siliculosus-1a_M_contig94.17423.1
Unique Name	prot_E-siliculosus-1a_M_contig94.17423.1
Type	polypeptide
Organism	Ectocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length	685

Homology

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BLAST of mRNA_E-siliculosus-1a_M_contig94.17423.1 vs. uniprot
Match: A0A6H5JH51_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JH51_9PHAE)

HSP 1 Score: 1294 bits (3348), Expect = 0.000e+0
Identity = 663/684 (96.93%), Postives = 677/684 (98.98%), Query Frame = 0

Query:    1 MSQHKHFTVEQIVYEGHIDLGENLWEKLGRPVGMPHLEERDLKLLDEAISILNPPEAHVRVVEVDTFTESERSIVKGSARIGHGDFSLRQMTAIFKRASPSGLGIAELTATNDDESKAEEGDVATEDMTPEAAAAALRVSEREKQEEAMKKPPKLPEIILFWGRNMRRGGNLVVCPGESSMDRLIQAYLVCEVVQDSKLFDKSVTSFSERVTTERKGGLMGVELGETSTAEQDALENLISDYSFHDASIGIISLVASIYYFFVLARNHVNVLTLLAVAVVAGLNQEATWPWVFKHILLCARMKDPIVRVSQCRLVRHHQGQLSGQGFLAIGLAAFGVYLEVFPTTDGDTPLLFRILLNGFQAAMVAVLVVNMVQAVEPMDISRVSPKDRLRPWARKYLDDNVFDTKWYLTLLVGVLWSGAVAVTIYVGLSYEIEGLGYTIPVICLIVLGLSIAAVNPGMALLGAWGFIWLVPVGLAFVCRSAFDTTLMLINKVSLTWRRMANEVVSHARDSAQGEFSVRDILKFLLQVLPLTPLFLVSLPIPVLYFFVWFIHLSMRVLLRVADALSAPALDFRLHPILSDYGSVTWKMDRLSMDVENRSMRTLLMARIDKLMESTSATLGERSRSGVIPNRPYWHLSKTSANRLGCIAVKIGTGEEQSSKTLLVSPDYIPDKPLAHADAPASVC 684
            MSQHKHFTVEQIVYEGHIDLGENLWEKLGRPVGMPHLEERDLKLLDEAIS+LNPPEAHVRVVEVDTFTESERSIVKGSARIGHGDFSLRQMTAIFKRASPSGLGIAELTATNDDESKAEE DVA ED+TPEAAAAALRVSER+K+EEAMKKPPKLPEIILFWGRNMRRGGNL+VCPGESSMDRLIQAYLVCEVVQDSKLFDKSVTSF ERVTTERKGGLMGVELGETSTAEQDALENLISDYSFHDASIGIISLVASIYYFFVLARNHVNVLTLLAVAVVAGLNQEATWPWVFKHILLCARMKDPIVRVSQCRLVRHHQGQLSGQGFLAIGLAAFGVYLEVFPTTDGDTPLLFRILLNGFQAAMVAVLVVNMVQAVEPMD+SRVSPKDRLRPWARKYLDDNVFDTKWYLTLLVGVLWSG V VTI+VG+S+E EGLGYTIPVICLIVLGLSIAAVNPGMALLGAWGFIWLVPVGLAFVCRSAFDT LMLINKVSLTWRRMANEVVSHARDSA+GEFSVRDILKFLLQVLPLTPLFLVSLPIP+LYFFVWFIHLSMRVLLRVADALSAPALDFRLHPILSDYGSVTWKMDRLSMDVENRSMRTLLMARIDKLMESTSATLGERSRSGVIP+RPYWHLSKTSANRLGCIAVKIGTGEE++SKTLLVSPDYIPDKPLAHADAPASVC
Sbjct:    1 MSQHKHFTVEQIVYEGHIDLGENLWEKLGRPVGMPHLEERDLKLLDEAISLLNPPEAHVRVVEVDTFTESERSIVKGSARIGHGDFSLRQMTAIFKRASPSGLGIAELTATNDDESKAEESDVAPEDLTPEAAAAALRVSERDKEEEAMKKPPKLPEIILFWGRNMRRGGNLIVCPGESSMDRLIQAYLVCEVVQDSKLFDKSVTSFRERVTTERKGGLMGVELGETSTAEQDALENLISDYSFHDASIGIISLVASIYYFFVLARNHVNVLTLLAVAVVAGLNQEATWPWVFKHILLCARMKDPIVRVSQCRLVRHHQGQLSGQGFLAIGLAAFGVYLEVFPTTDGDTPLLFRILLNGFQAAMVAVLVVNMVQAVEPMDMSRVSPKDRLRPWARKYLDDNVFDTKWYLTLLVGVLWSGGVTVTIFVGVSHEFEGLGYTIPVICLIVLGLSIAAVNPGMALLGAWGFIWLVPVGLAFVCRSAFDTALMLINKVSLTWRRMANEVVSHARDSARGEFSVRDILKFLLQVLPLTPLFLVSLPIPLLYFFVWFIHLSMRVLLRVADALSAPALDFRLHPILSDYGSVTWKMDRLSMDVENRSMRTLLMARIDKLMESTSATLGERSRSGVIPSRPYWHLSKTSANRLGCIAVKIGTGEEENSKTLLVSPDYIPDKPLAHADAPASVC 684

The following BLAST results are available for this feature:

BLAST of mRNA_E-siliculosus-1a_M_contig94.17423.1 vs. uniprot

BLAST of mRNA_E-siliculosus-1a_M_contig94.17423.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A6H5JH51_9PHAE	0.000e+0	96.93	Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 351..373
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 340..350
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 407..429
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 271..293
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 524..551
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 247..265
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 484..523
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 322..339
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 374..406
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 294..321
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 266..270
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 462..483
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 456..461
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 552..684
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 435..455
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 430..434
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 1..246
None	No IPR available	TMHMM	TMhelix		coord: 271..293
None	No IPR available	TMHMM	TMhelix		coord: 242..264
None	No IPR available	TMHMM	TMhelix		coord: 528..550
None	No IPR available	TMHMM	TMhelix		coord: 461..483
None	No IPR available	TMHMM	TMhelix		coord: 436..455
None	No IPR available	TMHMM	TMhelix		coord: 322..344
None	No IPR available	TMHMM	TMhelix		coord: 351..373
None	No IPR available	TMHMM	TMhelix		coord: 407..429

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
E-siliculosus-1a_M_contig94	contig	E-siliculosus-1a_M_contig94:283125..292082 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male	2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90	2022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_E-siliculosus-1a_M_contig94.17423.1	mRNA_E-siliculosus-1a_M_contig94.17423.1	Ectocarpus siliculosus Ec864m_EcPH12_78m male	mRNA	E-siliculosus-1a_M_contig94 282233..294011 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_E-siliculosus-1a_M_contig94.17423.1 ID=prot_E-siliculosus-1a_M_contig94.17423.1|Name=mRNA_E-siliculosus-1a_M_contig94.17423.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=685bp
MSQHKHFTVEQIVYEGHIDLGENLWEKLGRPVGMPHLEERDLKLLDEAIS
ILNPPEAHVRVVEVDTFTESERSIVKGSARIGHGDFSLRQMTAIFKRASP
SGLGIAELTATNDDESKAEEGDVATEDMTPEAAAAALRVSEREKQEEAMK
KPPKLPEIILFWGRNMRRGGNLVVCPGESSMDRLIQAYLVCEVVQDSKLF
DKSVTSFSERVTTERKGGLMGVELGETSTAEQDALENLISDYSFHDASIG
IISLVASIYYFFVLARNHVNVLTLLAVAVVAGLNQEATWPWVFKHILLCA
RMKDPIVRVSQCRLVRHHQGQLSGQGFLAIGLAAFGVYLEVFPTTDGDTP
LLFRILLNGFQAAMVAVLVVNMVQAVEPMDISRVSPKDRLRPWARKYLDD
NVFDTKWYLTLLVGVLWSGAVAVTIYVGLSYEIEGLGYTIPVICLIVLGL
SIAAVNPGMALLGAWGFIWLVPVGLAFVCRSAFDTTLMLINKVSLTWRRM
ANEVVSHARDSAQGEFSVRDILKFLLQVLPLTPLFLVSLPIPVLYFFVWF
IHLSMRVLLRVADALSAPALDFRLHPILSDYGSVTWKMDRLSMDVENRSM
RTLLMARIDKLMESTSATLGERSRSGVIPNRPYWHLSKTSANRLGCIAVK
IGTGEEQSSKTLLVSPDYIPDKPLAHADAPASVC*