prot_E-siliculosus-1a_M_contig94.17413.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig94.17413.1
Unique Nameprot_E-siliculosus-1a_M_contig94.17413.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length1001
Homology
[Close]
BLAST of mRNA_E-siliculosus-1a_M_contig94.17413.1 vs. uniprot
Match: D7FIP9_ECTSI (HSF_DOMAIN domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FIP9_ECTSI)

HSP 1 Score: 495 bits (1274), Expect = 8.990e-165
Identity = 286/297 (96.30%), Postives = 287/297 (96.63%), Query Frame = 0 
Query:  704 VPKGVGTGXXXXXXXXXXXXXXXXXXXXXXXXXXXRRGVPTKFLSILYDMLVEGNPQVWWERETGSVVIEDPQLFEAETMPLFFADPKVSGFLRQLAFYGFKKPGRSVKEQGRYQHPECRWKDVSCVKSLLTKKAYDLRRLEKAIRNTSAVTGPDRSPCGDGGRTGSVGAVGQGEEGDAAEVERTELEVAAEATVVRGKSVGRQVRKELRQMMSRSQLGCWQVEQTAKLMMKIMRLNAKLAEGLRQCRARGGPPVLCRYNMNSPALAKVRVENARLRRRVRRLEDEAERRGLPLTAR 1000
            VPKGVGTG  XXXXXXXXXXXXXXXXXXXXXXXXX   VPTKFLSILYDMLVEGNPQVWWERETGSVVIEDPQLFEAETMP FF DPKVSGFLRQLAFYGFKKPGRSVKEQGRYQHPECRWKDVSCVKSLLTKKAYDLRRLEKAIRNTSAV GPD SPCGDGGRTGSVGAVGQGEEGDAAEVERTELEVAAEATVVRGKSVGRQVRKELRQMMSRSQLGCWQVEQTAKLMMKIMRLNAKLAEGLRQCRARGGPPVL RYNMNSPALAKVR+ENARLRRRVRRLEDEAERRGLPLTAR
Sbjct:   28 VPKGVGTGGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXVPTKFLSILYDMLVEGNPQVWWERETGSVVIEDPQLFEAETMPRFFTDPKVSGFLRQLAFYGFKKPGRSVKEQGRYQHPECRWKDVSCVKSLLTKKAYDLRRLEKAIRNTSAVAGPDGSPCGDGGRTGSVGAVGQGEEGDAAEVERTELEVAAEATVVRGKSVGRQVRKELRQMMSRSQLGCWQVEQTAKLMMKIMRLNAKLAEGLRQCRARGGPPVLRRYNMNSPALAKVRLENARLRRRVRRLEDEAERRGLPLTAR 324
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig94.17413.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FIP9_ECTSI8.990e-16596.30HSF_DOMAIN domain-containing protein n=2 Tax=Ectoc... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 969..989
NoneNo IPR availablePANTHERPTHR14445GRB10 INTERACTING GYF PROTEINcoord: 108..367
NoneNo IPR availablePANTHERPTHR14445:SF41coord: 108..367
IPR000232Heat shock factor (HSF)-type, DNA-bindingSMARTSM00415hsfneu3coord: 742..918
e-value: 0.0011
score: 5.3
IPR000232Heat shock factor (HSF)-type, DNA-bindingPFAMPF00447HSF_DNA-bindcoord: 746..821
e-value: 4.0E-12
score: 46.6
IPR036388Winged helix-like DNA-binding domain superfamilyGENE3D1.10.10.10coord: 739..836
e-value: 8.9E-12
score: 47.1
IPR036390Winged helix DNA-binding domain superfamilySUPERFAMILY46785"Winged helix" DNA-binding domaincoord: 744..810

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig94contigE-siliculosus-1a_M_contig94:186652..193282 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig94.17413.1mRNA_E-siliculosus-1a_M_contig94.17413.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig94 186010..194480 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig94.17413.1 ID=prot_E-siliculosus-1a_M_contig94.17413.1|Name=mRNA_E-siliculosus-1a_M_contig94.17413.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=1001bp
MTNEGVGSTQLSSFTNPEVRQQSSSLALLGPPPPEFHPEQQQQQQQQQQH
FQYPGSLGQQQQHQHQRQLPESQALPSLRSSINFSGTRSRDHHHQRHHHQ
HIGPNNPAAAQQQPQRSPGRTGGIPVPAVGALPQRQSPQLRPLSFPQSSG
GSGSSSGSPGALSPSGLGGAAGFYSRGGERGTGTHQRLARTLPSPFSGGG
SRGVDGLDIGPSSTQQQQQQQQQQQQFSVAALPNAAWPPSLLPGYRTMSM
PPSQAQDSAPPLRQPQSPAVAVAGGGWGVASPPAGMAARRGGGSEGDRAA
CPSSGMGGTSTRPASPGSWVAPQAQRSGSGGSGGGVAGDSSAMGGTGSGQ
IKTRVVQQQQQQQQPQAPFARVAGGSGESYGGGGLPQPLLPQVAHHSPRA
QQQQQQWGMGATTNVLARSVTAGGPWPVNRSHGGGGGGGGGGGGTARTDL
QQTPTYGWSSQDSSSRLPQQSPDVGAMMARAIGGGAQRQQKAGMNLVGGG
ATVGPAALRGGGVFAGAGAAASSSGPVSLLSAPVGDFVKQPHRVGKRPQQ
QQQQQQRGRGLVLAPRQELAGQQGPPSAAAAAAVAAINAAAMGDAASREW
SALRTTIPFYQGMLKIPQQGQQPKMLPQQQQQQQQQQQQQQQQQQPQQPQ
QHVAAPASPPLPVTVSPLTSPRFTPIAPMIPKQQPAAMPPPTPPPPPPPP
TPAVPKGVGTGGKGEGGKAGGAATGGNGGGGGAGRGPGRRGVPTKFLSIL
YDMLVEGNPQVWWERETGSVVIEDPQLFEAETMPLFFADPKVSGFLRQLA
FYGFKKPGRSVKEQGRYQHPECRWKDVSCVKSLLTKKAYDLRRLEKAIRN
TSAVTGPDRSPCGDGGRTGSVGAVGQGEEGDAAEVERTELEVAAEATVVR
GKSVGRQVRKELRQMMSRSQLGCWQVEQTAKLMMKIMRLNAKLAEGLRQC
RARGGPPVLCRYNMNSPALAKVRVENARLRRRVRRLEDEAERRGLPLTAR
*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036390WH_DNA-bd_sf
IPR036388WH-like_DNA-bd_sf
IPR000232HSF_DNA-bd