mRNA_E-siliculosus-1a_F_contig1049.350.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_F_contig1049.350.1
Unique NamemRNA_E-siliculosus-1a_F_contig1049.350.1
TypemRNA
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Homology
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BLAST of mRNA_E-siliculosus-1a_F_contig1049.350.1 vs. uniprot
Match: D8LB85_ECTSI (Protein RER1 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LB85_ECTSI)

HSP 1 Score: 104 bits (260), Expect = 2.590e-22
Identity = 61/137 (44.53%), Postives = 85/137 (62.04%), Query Frame = 2 
Query:  209 RRTYRQCARQAAGCVACRWLLFAASAAVFILRVYTERGWYVVAYSVGILVLNNTVQFLTPRIGPDAERLRGLSERRRHRFRLFRPRIGGRLREFPCWRSSQKWLLVALAMTYFGLFDIPVYTPIIVVYFVFLMAFTL 619
            RRTY+    ++      RW LF  S  +F+LR+Y  +GW++V Y +GI +LNN + FL+P+I P++E   GL       FR F      RL EF  W SSQK LL+A  MT+F LFDIPV+ PI+++YF+ LM  T+
Sbjct:   17 RRTYQYWLDRSVIYTMWRWGLFFVSVCLFLLRIYLVKGWFIVTYGLGIFLLNNLIGFLSPQIDPESEGP-GLPTSGSDEFRPF----SRRLPEFQFWLSSQKGLLMAFGMTFFSLFDIPVFWPILLIYFIVLMFLTM 148
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BLAST of mRNA_E-siliculosus-1a_F_contig1049.350.1 vs. uniprot
Match: A0A6U4CB41_9STRA (Protein RER1 n=4 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4CB41_9STRA)

HSP 1 Score: 93.6 bits (231), Expect = 1.770e-18
Identity = 55/137 (40.15%), Postives = 84/137 (61.31%), Query Frame = 2 
Query:  212 RTYRQCARQAAGCVACRWLLFAASAAVFILRVYTERGWYVVAYSVGILVLNNTVQFLTPRIGPDAERLRGLS-ERRRHRFRLFRPRIGGRLREFPCWRSSQKWLLVALAMTYFGLFDIPVYTPIIVVYFVFLMAFTL 619
            RTY+    ++   V  RWL FA   A+++LR+Y   G+++V Y++GI +LNN + FLTP++ P+A+R  GL           FRP    RL EF  W S  K L+    MT+FG+FD+PV+ PI+++YF+ L + T+
Sbjct:   22 RTYQHYLDKSTIYVVPRWLGFAGVLALYLLRIYMVNGFFLVTYALGIFLLNNLIGFLTPQMDPEADRGDGLGLPTTNSDVDEFRP-FERRLPEFQFWHSCAKGLVYCFLMTFFGVFDVPVFWPILLLYFIVLFSLTM 157
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BLAST of mRNA_E-siliculosus-1a_F_contig1049.350.1 vs. uniprot
Match: A0A7R9YCX7_9STRA (Protein RER1 n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YCX7_9STRA)

HSP 1 Score: 92.0 bits (227), Expect = 7.100e-18
Identity = 54/137 (39.42%), Postives = 84/137 (61.31%), Query Frame = 2 
Query:  212 RTYRQCARQAAGCVACRWLLFAASAAVFILRVYTERGWYVVAYSVGILVLNNTVQFLTPRIGPDAERLRGLS-ERRRHRFRLFRPRIGGRLREFPCWRSSQKWLLVALAMTYFGLFDIPVYTPIIVVYFVFLMAFTL 619
            RTY+    ++A   A RWL F    A+++LR+Y   G+++V Y++GI +LNN + FLTP++ P+A+R  GL      +    FRP    RL EF  W S  K L+    MT+F +FD+PV+ PI+++YF+ L + T+
Sbjct:   20 RTYQHYLDKSAIYTAPRWLSFFGILALYLLRIYVVNGFFLVTYALGIFLLNNLIGFLTPQLDPEADRGDGLGLPTTNNDVDEFRP-FERRLPEFQFWYSCIKGLVYCFMMTFFSVFDVPVFWPILLIYFIVLFSLTM 155
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BLAST of mRNA_E-siliculosus-1a_F_contig1049.350.1 vs. uniprot
Match: A0A0G4H715_VITBC (Protein RER1 n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4H715_VITBC)

HSP 1 Score: 91.7 bits (226), Expect = 9.450e-18
Identity = 48/128 (37.50%), Postives = 82/128 (64.06%), Query Frame = 2 
Query:  260 RWLLFAASAAVFILRVYTERGWYVVAYSVGILVLNNTVQFLTPRIGPDAERLRG--LSERRRHRFRLFRPRIGGRLREFPCWRSSQKWLLVALAMTYFGLFDIPVYTPIIVVYFVFLMAFTLCKVFRE 637
            RWL F A  A+F+LR+Y  +G+Y+V Y +GI +LN  + FL+P++ P+ E   G  L  R    +R F+ R+     EF CW+S+ + +++++ MT+F +FD+PV+ PI+++YF+ L   T+ +  R 
Sbjct:   37 RWLFFFAMVALFVLRIYLTQGFYIVTYGLGIYLLNLLIGFLSPQVDPETE---GPVLPVRDAEEYRPFQRRLP----EFKCWQSATRAVVISITMTFFRMFDLPVFWPILLMYFLVLFVLTMKQQIRH 157
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BLAST of mRNA_E-siliculosus-1a_F_contig1049.350.1 vs. uniprot
Match: A0A4D8YZI5_SALSN (Protein RER1 n=2 Tax=Salvia TaxID=21880 RepID=A0A4D8YZI5_SALSN)

HSP 1 Score: 90.1 bits (222), Expect = 4.030e-17
Identity = 51/120 (42.50%), Postives = 76/120 (63.33%), Query Frame = 2 
Query:  260 RWLLFAASAAVFILRVYTERGWYVVAYSVGILVLNNTVQFLTPRIGPDAERLRGLSERRRHRFRLFRPRIGGRLREFPCWRSSQKWLLVALAMTYFGLFDIPVYTPIIVVYFVFLMAFTL 619
            RWL+  A+AA++ILRVY  RG+YV++Y + I +LN  + FL+P++ P+ E L G S   +H    FRP +  RL EF  W +  K   VA  +T+F +FD+PV+ PI+  Y+ FL   T+
Sbjct:   40 RWLVTLAAAAIYILRVYYARGFYVISYGLSIYILNLLIGFLSPKVDPELELLDGPSSPTKH-SEEFRPFVR-RLPEFLFWYAITKAFCVAFLLTFFSMFDVPVFWPILFFYWFFLFFLTM 157
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BLAST of mRNA_E-siliculosus-1a_F_contig1049.350.1 vs. uniprot
Match: A0A6I9TR45_SESIN (Protein RER1 n=1 Tax=Sesamum indicum TaxID=4182 RepID=A0A6I9TR45_SESIN)

HSP 1 Score: 89.0 bits (219), Expect = 1.020e-16
Identity = 51/123 (41.46%), Postives = 79/123 (64.23%), Query Frame = 2 
Query:  251 VACRWLLFAASAAVFILRVYTERGWYVVAYSVGILVLNNTVQFLTPRIGPDAERLRGLSERRRHRFRLFRPRIGGRLREFPCWRSSQKWLLVALAMTYFGLFDIPVYTPIIVVYFVFLMAFTL 619
            +A RWL   A+AA+++LRVY  +G+YV++Y +GI +LN  + F++P++ P+ E L G S   +     FRP +  RL EF  W ++ K   VA  MT+F +FD+PV+ PI+  Y+VFL   T+
Sbjct:   37 IAKRWLGTLAAAAIYVLRVYYVQGFYVISYGLGIYILNLLIGFMSPKVDPELEVLDGASLPTKETDE-FRPFVR-RLPEFKFWYATTKAFCVAFLMTFFSIFDVPVFWPILFFYWVFLFFLTM 157
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BLAST of mRNA_E-siliculosus-1a_F_contig1049.350.1 vs. uniprot
Match: A0A5A7PSB8_STRAF (Protein RER1 n=1 Tax=Striga asiatica TaxID=4170 RepID=A0A5A7PSB8_STRAF)

HSP 1 Score: 89.0 bits (219), Expect = 1.020e-16
Identity = 50/122 (40.98%), Postives = 76/122 (62.30%), Query Frame = 2 
Query:  260 RWLLFAASAAVFILRVYTERGWYVVAYSVGILVLNNTVQFLTPRIGPDAERLRGLSERRR--HRFRLFRPRIGGRLREFPCWRSSQKWLLVALAMTYFGLFDIPVYTPIIVVYFVFLMAFTL 619
            RWL   A+A++++LRVY  +G+YV++Y +GI +LN  + F++P++ P+ E L G S   R  H FR F  R+     EF  W +  K   VA  MT+F +FD+PV+ PI+  Y+VFL   T+
Sbjct:   40 RWLGTLAAASIYVLRVYYVQGFYVISYGLGIYILNLLIGFMSPKVDPELEALDGASSPMRDPHEFRPFIRRLP----EFMFWYAITKAFCVAFMMTFFSVFDVPVFWPILFFYWVFLFFLTM 157
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BLAST of mRNA_E-siliculosus-1a_F_contig1049.350.1 vs. uniprot
Match: A0A2Z7B3C3_9LAMI (Protein RER1 n=1 Tax=Dorcoceras hygrometricum TaxID=472368 RepID=A0A2Z7B3C3_9LAMI)

HSP 1 Score: 89.0 bits (219), Expect = 1.020e-16
Identity = 50/119 (42.02%), Postives = 75/119 (63.03%), Query Frame = 2 
Query:  260 RWLLFAASAAVFILRVYTERGWYVVAYSVGILVLNNTVQFLTPRIGPDAERLRGLSERRRHRFRLFRPRIGGRLREFPCWRSSQKWLLVALAMTYFGLFDIPVYTPIIVVYFVFLMAFT 616
            RWL   A+AA+++LRVY  RG+Y+++Y +GI +LN  + FL+P++ P+ E L G S   +     FRP +  RL EF  W ++ K   VA  MT+F  FD+PV+ PI+  Y++FL   T
Sbjct:   40 RWLGTLAAAAIYVLRVYFGRGFYIISYGIGIYILNLLIGFLSPKVDPEIEALDGASSPTKDTDE-FRPFVH-RLPEFKFWYATTKAFCVAFFMTFFSAFDVPVFWPILFFYWLFLFFLT 156
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BLAST of mRNA_E-siliculosus-1a_F_contig1049.350.1 vs. uniprot
Match: UPI0018ADEC17 (protein RER1B-like n=1 Tax=Dioscorea cayennensis subsp. rotundata TaxID=55577 RepID=UPI0018ADEC17)

HSP 1 Score: 88.6 bits (218), Expect = 1.350e-16
Identity = 55/120 (45.83%), Postives = 75/120 (62.50%), Query Frame = 2 
Query:  260 RWLLFAASAAVFILRVYTERGWYVVAYSVGILVLNNTVQFLTPRIGPDAERLRGLSERRRHRFRLFRPRIGGRLREFPCWRSSQKWLLVALAMTYFGLFDIPVYTPIIVVYFVFLMAFTL 619
            RWL   A AA++ILRVY  +G+Y+V+Y +GI VLN  + FL+P + P+ E L G S   R     F+P I  RL EF  W S  K L VA  MT+F +FD+PV+ PI++ Y+V L   T+
Sbjct:   40 RWLGTLAVAAIYILRVYFVQGFYIVSYGLGIYVLNLLIGFLSPMVDPELEVLEGASLPTRGSDE-FKPFIR-RLPEFKFWYSITKALCVAFVMTFFSIFDVPVFWPILLFYWVVLFVLTM 157
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BLAST of mRNA_E-siliculosus-1a_F_contig1049.350.1 vs. uniprot
Match: A0A2I0A1A1_9ASPA (Protein RER1 n=1 Tax=Apostasia shenzhenica TaxID=1088818 RepID=A0A2I0A1A1_9ASPA)

HSP 1 Score: 88.2 bits (217), Expect = 1.800e-16
Identity = 54/120 (45.00%), Postives = 75/120 (62.50%), Query Frame = 2 
Query:  260 RWLLFAASAAVFILRVYTERGWYVVAYSVGILVLNNTVQFLTPRIGPDAERLRGLSERRRHRFRLFRPRIGGRLREFPCWRSSQKWLLVALAMTYFGLFDIPVYTPIIVVYFVFLMAFTL 619
            RWL   A AAV++LRVY  +G+Y+V+Y +GI VLN  + FL+P + P+ E L G S   R     F+P I  RL EF  W S  K   VA  MT+F +FD+PV+ PI++ Y++ L A T+
Sbjct:   41 RWLGSLAVAAVYVLRVYLVQGFYIVSYGLGIYVLNLLIGFLSPMVDPELETLDGASLPTRGSDE-FKPFIR-RLPEFKFWYSITKAFCVAFLMTFFSIFDVPVFWPILLFYWIVLFALTM 158
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1049.350.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LB85_ECTSI2.590e-2244.53Protein RER1 n=2 Tax=Ectocarpus TaxID=2879 RepID=D... [more]
A0A6U4CB41_9STRA1.770e-1840.15Protein RER1 n=4 Tax=Phaeomonas parva TaxID=124430... [more]
A0A7R9YCX7_9STRA7.100e-1839.42Protein RER1 n=1 Tax=Pinguiococcus pyrenoidosus Ta... [more]
A0A0G4H715_VITBC9.450e-1837.50Protein RER1 n=1 Tax=Vitrella brassicaformis (stra... [more]
A0A4D8YZI5_SALSN4.030e-1742.50Protein RER1 n=2 Tax=Salvia TaxID=21880 RepID=A0A4... [more]
A0A6I9TR45_SESIN1.020e-1641.46Protein RER1 n=1 Tax=Sesamum indicum TaxID=4182 Re... [more]
A0A5A7PSB8_STRAF1.020e-1640.98Protein RER1 n=1 Tax=Striga asiatica TaxID=4170 Re... [more]
A0A2Z7B3C3_9LAMI1.020e-1642.02Protein RER1 n=1 Tax=Dorcoceras hygrometricum TaxI... [more]
UPI0018ADEC171.350e-1645.83protein RER1B-like n=1 Tax=Dioscorea cayennensis s... [more]
A0A2I0A1A1_9ASPA1.800e-1645.00Protein RER1 n=1 Tax=Apostasia shenzhenica TaxID=1... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1049contigE-siliculosus-1a_F_contig1049:29314..36828 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Properties
Property NameValue
Start1
Stop1
Cds size495
Model size1681
Exons6
Hectar predicted targeting categoryother localisation
Best eggNOG OGNA|NA|NA
Best tax levelEukaryota
COG Functional cat.U
Ec32 orthologEc-13_004060.2
Ec32 ortholog descriptionRER1 family protein
EggNOG OGsCOG5249@1,KOG1688@2759
EggNOG free text desc.retrograde vesicle-mediated transport, Golgi to ER
GOsGO:0000139,GO:0000322,GO:0000323,GO:0000324,GO:0001941,GO:0003674,GO:0005102,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005773,GO:0005783,GO:0005793,GO:0005794,GO:0005798,GO:0005801,GO:0006621,GO:0006810,GO:0006886,GO:0006888,GO:0006890,GO:0007528,GO:0008104,GO:0008150,GO:0009986,GO:0009987,GO:0012505,GO:0015031,GO:0015833,GO:0016020,GO:0016021,GO:0016043,GO:0016192,GO:0030134,GO:0030135,GO:0030137,GO:0030173,GO:0031090,GO:0031224,GO:0031228,GO:0031300,GO:0031301,GO:0031410,GO:0031982,GO:0031984,GO:0032507,GO:0032879,GO:0032880,GO:0033036,GO:0033130,GO:0033365,GO:0034613,GO:0035437,GO:0042886,GO:0043113,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044422,GO:0044424,GO:0044425,GO:0044431,GO:0044444,GO:0044446,GO:0044464,GO:0045184,GO:0045185,GO:0046907,GO:0048193,GO:0048518,GO:0050789,GO:0050808,GO:0051179,GO:0051234,GO:0051235,GO:0051641,GO:0051649,GO:0051651,GO:0051668,GO:0060341,GO:0061024,GO:0065007,GO:0065008,GO:0070727,GO:0070972,GO:0071340,GO:0071702,GO:0071705,GO:0071840,GO:0072595,GO:0072657,GO:0097708,GO:0098588,GO:0098791,GO:0099173,GO:1903076,GO:1903078,GO:1903827,GO:1903829,GO:1904375,GO:1904377,GO:1905475,GO:1905477
Preferred nameRER1
Seed eggNOG ortholog2880.D8LB85
Seed ortholog evalue2.4e-20
Seed ortholog score105.5
Taxonomic scopeEukaryota
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1049.350.1prot_E-siliculosus-1a_F_contig1049.350.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalepolypeptideE-siliculosus-1a_F_contig1049 30319..36647 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927550.568906-UTR-E-siliculosus-1a_F_contig1049:29313..303181622927550.568906-UTR-E-siliculosus-1a_F_contig1049:29313..30318Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1049 29314..30318 -
1696318581.215247-UTR-E-siliculosus-1a_F_contig1049:29313..303181696318581.215247-UTR-E-siliculosus-1a_F_contig1049:29313..30318Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1049 29314..30318 -
1622927550.6583943-UTR-E-siliculosus-1a_F_contig1049:36647..368281622927550.6583943-UTR-E-siliculosus-1a_F_contig1049:36647..36828Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1049 36648..36828 -
1696318581.2722638-UTR-E-siliculosus-1a_F_contig1049:36647..368281696318581.2722638-UTR-E-siliculosus-1a_F_contig1049:36647..36828Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1049 36648..36828 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927550.5790436-CDS-E-siliculosus-1a_F_contig1049:30318..303871622927550.5790436-CDS-E-siliculosus-1a_F_contig1049:30318..30387Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1049 30319..30387 -
1696318581.2275267-CDS-E-siliculosus-1a_F_contig1049:30318..303871696318581.2275267-CDS-E-siliculosus-1a_F_contig1049:30318..30387Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1049 30319..30387 -
1622927550.5885985-CDS-E-siliculosus-1a_F_contig1049:32353..325101622927550.5885985-CDS-E-siliculosus-1a_F_contig1049:32353..32510Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1049 32354..32510 -
1696318581.2349608-CDS-E-siliculosus-1a_F_contig1049:32353..325101696318581.2349608-CDS-E-siliculosus-1a_F_contig1049:32353..32510Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1049 32354..32510 -
1622927550.6072638-CDS-E-siliculosus-1a_F_contig1049:33602..336611622927550.6072638-CDS-E-siliculosus-1a_F_contig1049:33602..33661Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1049 33603..33661 -
1696318581.2427225-CDS-E-siliculosus-1a_F_contig1049:33602..336611696318581.2427225-CDS-E-siliculosus-1a_F_contig1049:33602..33661Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1049 33603..33661 -
1622927550.6219985-CDS-E-siliculosus-1a_F_contig1049:34664..347941622927550.6219985-CDS-E-siliculosus-1a_F_contig1049:34664..34794Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1049 34665..34794 -
1696318581.2501333-CDS-E-siliculosus-1a_F_contig1049:34664..347941696318581.2501333-CDS-E-siliculosus-1a_F_contig1049:34664..34794Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1049 34665..34794 -
1622927550.6356363-CDS-E-siliculosus-1a_F_contig1049:35423..354711622927550.6356363-CDS-E-siliculosus-1a_F_contig1049:35423..35471Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1049 35424..35471 -
1696318581.2575395-CDS-E-siliculosus-1a_F_contig1049:35423..354711696318581.2575395-CDS-E-siliculosus-1a_F_contig1049:35423..35471Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1049 35424..35471 -
1622927550.6461766-CDS-E-siliculosus-1a_F_contig1049:36615..366471622927550.6461766-CDS-E-siliculosus-1a_F_contig1049:36615..36647Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1049 36616..36647 -
1696318581.264962-CDS-E-siliculosus-1a_F_contig1049:36615..366471696318581.264962-CDS-E-siliculosus-1a_F_contig1049:36615..36647Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1049 36616..36647 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_F_contig1049.350.1

>prot_E-siliculosus-1a_F_contig1049.350.1 ID=prot_E-siliculosus-1a_F_contig1049.350.1|Name=mRNA_E-siliculosus-1a_F_contig1049.350.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=165bp
MMITASHHPRRTYRQCARQAAGCVACRWLLFAASAAVFILRVYTERGWYV
VAYSVGILVLNNTVQFLTPRIGPDAERLRGLSERRRHRFRLFRPRIGGRL
REFPCWRSSQKWLLVALAMTYFGLFDIPVYTPIIVVYFVFLMAFTLCKVF
RERRRASGRRMWML*
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mRNA from alignment at E-siliculosus-1a_F_contig1049:29314..36828-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_F_contig1049.350.1 ID=mRNA_E-siliculosus-1a_F_contig1049.350.1|Name=mRNA_E-siliculosus-1a_F_contig1049.350.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=7515bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1049:29314..36828- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
CACCCATCCCACAGATTGACCCAGGATAGAGAGCGGGTGCCAGCCCTCAA
GGCGCAGGGCTGATTGACCAGTCCAACTGGGTCGTGCCGCTTCGTTTGGG
GGTGCGGTTGGTGTTGGCAAGGCCCGGCTGGACGAGCCAACTGCAGGGGC
AGCGACCCGAGAAAGTGTCAAGACGTGCAGTATGATGATCACTGCATCCC
ACCACCCCCGACGGTATGATCCAAAGCAGTATCAATCATATGGCGTGGGT
GGGTGTCCGTTCGCCCCCCATCTATTGATCGTGGTACCAGTCTACACACG
TTATGGTTGTGTGCTGCTGTGTGCCTTGGCGGATCACAGCCGGGGTCACA
ACGTCACACCGCACCATCACACAGGTTGAAATCGCCTTTTTTTTTTTTTT
TTGAAAGTAAACATAACCTCACAGAAAGACTGCCCGTTCGAGATATAACC
TCAGTCGAAAGGGATTTGGTGAAGTATTTTCAGTAAGTGGTCCTCTCCCA
TTGGCCGGAGGCCGGGGCAGCGAACGCCGCGCGGAGCGTTGCCTTTTTTC
AAGGAGGCTCTGGAAACATCTCACACGACTTATTTATTTCGCAGCATAGG
ATGTGACCAATCAATAATGGGGTCCCGATGTCGCGGAGAGAAGGAAGGAG
CTGTTTGTGTCGTTGTTTCGACGTCTCTGTCTGCATCGTGCATGCCCTAA
GAAAAACACCGGCTGTTCCTCTGAAATCAAAATCAACCGTTTTTGTTTTG
GTGTTCTTATCAGCAACATGTTCATAAAACCAGTATATATATTTTTTTTT
GCAGAACCACCGATCTACGCTACAGACGTGTGGACCTCACATCGTCTACG
ACTTCGTGTGTCTCGATGTCATCATAGCGTCTACTTCCTCTGCCGATCGA
ACCGCCGCACCCATCCCACGCATGCATGCTGGCCGCCCGCCCAATTGGGG
GGCGGGGGCGCAATCGTTCCCCCTAGCAACCAGCAAGACCCAGGACCTTT
CAGCGAAACAAAAAAGAGCGGGAAGAGACTGCGTGTTTCTCGCACCCTTC
TAAGGGGCCGATGGTCCCCCTAGACTGCCGTGGCGCGGCCTTGACTCATT
GGCACGCCAGCAACGTTTAACGACCTCCACCCCTCCCCCCCGGAAACGAT
TGGCCGTCGGCAATCGGTCCTCCTGCGGGAACAACGCTCCGTCCTCTCGA
GGACGACGTGGTCAGTCAGTGGTCTAACCGCTAAGGCATCCAAAACATGA
CATGAGTAGAGGACACCCATCTCTTTCAGAAGAACGATGCCCCGTAGAAT
GAAAAACATGACATGAGTACACCCCCCCCCCCCGCGCTGACCCGCGCCTT
CTTCCAGGACGTACCGGCAGTGCGCTCGGCAAGCGGCCGGCTGCGTGGCA
TGCAGGTGACTCTCGTTCATGCAACGATTGGGAGGGGTGCCTGAACTGTT
TCTGGGTCTGTCTGTGTCTCAAAGTGAGAAGCTCGGTGTCTCAAGCCCGG
AATGGATACAGACACAACGAACGCGAGCATGCTGCGCGACAAGTAGATGA
AACACTAAAATGAAATTCAAATCGGCATGGATTCTTACGGGTTGGTTACT
TATCTGAGGAACACGAACACGAGAAGATTCTGCGTCATGGTAAACGTGCT
ATCCCTACCGCCGTTGCATGTTGGCTGCCTCCGCGTCTTCCAGCGGACGC
TACCGCGCCTTCCCGCGGTAGTGTGGGTTGAGTTCGGGGACTACAATATG
TTAATCCAGGACCGATATTGATTGATGACATAAACCTTGAGTATCATACA
CCGTGCTCATTCCAGCACACAGACATGGAGAGTGTAAACACACACAGAGA
AACACACATAGCATATGCAATGCGTGCTCTCTCTCTCTCTCTCTCTCTCT
CTCTCTCTCTGTCTGTCTCTCGAGGGGCCCCGCACTTGAACCCCCAACAG
CATACACCCCACACACACACACACATAGTTCCCAGATCGGCTGTATCGTA
TCCAAGTACCCCCAACATTGCACGACTGACTCAGGTGGTTGCTGTTCGCG
GCGTCGGCGGCGGTGTTTATCTTGCGGGTCTACACCGAGAGGGGGTGGTA
CGTGGTGGCGTACTCCGTCGGCATCTTGGTCCTGAACAACACCGTGCAGT
TTTTGACGCCCCGGGTACGTGCGTTTTGAGCAACACCGGTCTTGGACAGC
GCTGCATAATACTGGCCTTGAACAACACCCATACGGTTTTTTGGTACGCC
CCGCAGGAATGTGTGTCTGGAACAACACTACTGCTGGACAGCTTTTGACC
CCGCAGACATGTGTGTCTTTAGCAACACTGTACAGTTTTGACGCCGCAGG
TGTGTCTTGAGCCACACTCGTCGTTATCAACATTCGCTGGTACATGTATT
CTGGAACGACACAGCTTTTTACTTCCAGGTATGCTGTACGTCTTGCAAGG
AAGGCTGGTCGTCGCACTCCAGGTATGTAGTTATTGGCTGTGATCCCGAA
ACATCCGCGCCTGCTGTGGCGAATCACTGGTGTTGGTCTACGTAGGCGAA
CTCTTCTTGCACTGTTGTTACTGCGCTGGCTCGAACCGTTCGGTCCGGTC
CCATCAACGTAGAGGATTGAGGCGAAAGCTTCAAGACGTTACGAGTGTTG
CCACCATGAAAAGCCGCCCGGCGTGTGTACCTCGTCCGTCGCGACTTCTG
CGATTGAGAGGCCCGGACGAAACCACTGCCGTCGCCGTCGTCGCGCTTAA
CTAAACTGGATCGTGTTTCTTTTCTCTATTTCCATCGCCGTTTTTATTGG
CTGAACGAACTGTCCGCCTGGTTGACCAATGAAATTGTGTCGGGGCCGGG
ACTAGCAACGAAACCTTGTTGTCGCGTATTCTACCACGTTTGTTTCCAGC
GGTATCTCTGTGCGTGGGCGGTGGGCGATTTACTCGGTTCGGTGTGTGAA
GACTACGGGGTGCTGAACACGCAAGCCGGATTACCGTGATGCCCCCCCAA
ATATGCCCCGCCCCCCGCACGCGTTTCATCCGCAAGTAGCCTTCTTGGGC
GATTTTTCTTGAGACTCGCCCGCAAAATCGCTTTATTCAACGCCGTTATC
GCTACCTCGCCGCCACCCGTCACCTGCTTCTCCTTGCCTCCTACAAAAAA
TTGGCAAAAAATAAAAGATTGGCCCGGACGCGGAGAGACTACGGGGCCTC
TCTGAACGGCGGCGGCATCGTTTCAGGTACGTTTTCTCACCACAGAACGC
GCCACCGCTTGAGACCTTAGCAGTTAGGAACTTCAGCCTCAATAATTCCA
AAATGTGAGAACACACCGACAAGAACAGGTTCTCAGCCAAGAGGCCTGCA
CCATAACCGATGTTGTTGCCGAGGGGGGTCGTCTACCCCATAGACAAATT
ATATATCGGGCCTCGGCGAATAGAGGGTTCCCGCAAGTGGTGGCGCGTTC
TGTACTTGACGTTGGCTTCATCATGATTTCTACAACCAAGAAGAGTCTCC
GACGCTACTGCTGGTCTCCCCCATCCCGTGCTGCGTGCTGCGACGTAGCT
CAGACGAGCGCCTCGACGTCTACAACCTTACAAGTCTTTGCTTCTGTAGA
TGGAACATAAACCAAAACATGACCGAAAAACGTGGCCTGTCGGCTTGCAT
CGAACTACTTGCTGTCGCTGCGTTTCCCACCCGAAGCCTGCCCGCCTGTA
CGGTGTCTTTGCTCCGGAATACCGTAAGGCTGCGAGAGTTGGCACCGCCC
TAGACCGATTTTCAAAGCTCGATTGCCCCACGAAAAGAGTAGGTACGGAA
AGAGCCCGATACATGTACGTGTGCTGAAAGACCTGCACGAGATGTTTCAA
AAATGAACATTTTCGGGGCTATCACAAGCTCGAGTGTGGAGCAATCGAGC
TGTTTTGAAGATCGGCCTACGGGGTGGCGCCTTCTCTCACATACTTGCGG
TGCACCGTGGTGGTGGTGGTGGTGCCCTATGTTCCGTTGCTTCGGATCCC
CGTTGCTGTGCTGCAGATGTAGCTCCCGGCCGGTTAACCTCGACTGCTGT
CCCACCTCCAGATAAGTAGCAGTAGGTGTTTTATCGTGTTTTGTTTTTCG
GCTGCCTCGCAGAGGCAGGAGAGAGGGAGAGAACGAGACGGCGAGTGGCA
ACACAGCCCACGAACGGCTACATAACGCAGGTACCAAGTCACCCCGCGTG
TGCGTACGCCCAGCCGACACGAAACCGCCATTGTTGCGGGAGAGATCATG
TGCCGACGGCACGATGATGCCAGTCGTGATACTCACGGATGGGACGTTTG
TCCATCCCACGGCAGCAGGCTCTTCCGTCCCCGAATCGGCGGCCGCCTAA
GGGAGTTCCCGTGCTGGAGATCGTCGCAGAAATGGCTGCTGGTAGCGCTC
GCCATGACGTACTTCGGCCTGTTCGACATCCCAGTGTACACACCGATTAT
TGTCGTGTACTTCGTCTTCCTCATGGTGGGTGGTGGGTGGTTGGCCGGAG
CTGTACAGAGAGGGTCCCGCAGATTAGGCACGCACGTCATAATCGGGTCG
AGGCTCAATTTCTGATTTCGTCTCCACCTTCTCAGCTTACTTGTTCGTCG
CCACTTCCGTCGGGATGCGAGAGAACGCACGGGGGTGGGTGCGATCGATT
TTCAAAGCGTAGTTTCTCCACAACCAGGAGGGTAGATACCACTTGTCGAA
TAGGGTGGTTTTGGAAATATCTCATCGAGAGCTTTCCTGAGAGGTATCAG
TTGGCGCTCGCACCCTCCTGGTTGTGGAGAAAATGCGCTTTGAAAATCGA
TCGCACCCCCGTGCGTTCTCTCGTATCCTTGCGGTACTCTGTCGAGCACA
CGTTGTAATATAGACTTTGGTGTAATGATGCACCCCTCAGGTGTGCTTCT
TAACCCATTTTTCTTCCGTTTCAAAATGTACGCCTCTGTTTCCAAAGAAA
AATATTTCTTACCTGCCGGCCCGCAGCAGGGTTGCTTCCGCTCGGGAAAG
ATTTATTGCGTGCCACCGGTGCGCACCTTTCCCGATATCCGTTAGTTTCA
AGTGTACCGTAAGGATACAAGAGATGACACCCCTCCGAGACCGAGGCTTC
AGAGTTCGATTGCTCCACAAACACACATGTGGGTGCCGAACGAGCACGAT
ACGGTACGTCAACGGAATGCCCTCGGGGAAGTTCTCGTTCGTTCCAGATC
CGTAATTTTTTGTGTTGGCACAACCTTGGTTGTGGAGAAGTCGAGCATGA
CAATCTTTCTAGGAGGGATGCCATCTCTTGCACCCTTATTATAGTTCCAA
CTTCCTTTCCGACGCCGCTTTTTTTTCCCAACATCGGCTAGTGAGTGTAT
AGTCTGTGGCGGGTCAGGCGGATCAGTTTCATGAACTGTTTGAGACACCG
CCGACAAGATCTCGGCAAGGGGGATGGGTACCCTAGGTGAAGCAAGATAT
CACAACCTCTTTGGACCCATTTTCGAAACTTGATTACTCCGCAGCAGCAG
AGGAGAGTGGCGGTGCAGAGAATGACGGCGTTGAAACTATCTCGTCGAAA
GCTTGCCGAAGACGAATCGTTTGATTTATACGCCCTCTTTTCCGTCGTGG
AGTACTGTTGTAGTTGAGCTTTGAAATCGGTCCAGGGGGTGTGATATCTT
GTGTGACCTCCGGTAGGCCCCCCTTACATCACCGACAGGAAGAAAGGGTA
CATCGGGTCCCAAAGCGATGAGTTAGTTGTCTGTCACAAGGAATGAATGA
GAGGCTAGCCCGCTCCACATCATCACTCAGTAGAAACCCGCTGGCCGACT
AGTGTACAGAGAGAGGTAGACGTCGGGCCTTCAATGAGTGCTCAGGGTTA
GCCGTTGTACAGCAGCGCCCTCCCTGACACTGTAATCAGGGCTAAGTTTG
CAGAAGAAACAAAATGGAGTTGTTGTTACCAGGGCTAAGTGAATAAAAGA
AAAAGTATGGATTTTCGCACCCGGCGGCGAGACGTTTTTTCCACCGGAGT
TGACACTAAAACAGTCATACACTTGTAAGAGGCGGTTAGATGGCACCCTC
CCTAGCCCCGGCTTTGGAGGGATGCGAGGTCAATGGTTTAACGACAACGG
CATGCACGACTATGAGTACCCCCCCCCCCCCCCCCAAGACCAGCTTTCAA
GCCTCCATTGCTCCATAACCAAAAGGGGTGCCGACACCCCTAGACGAGAT
GTTTGCAAAACCGTCGTTTTTATTGATGGTACAGTCTTAGTTGCGGAGAA
ATCGAGCTTTGAAATCGGTGTAGGGTTGTTGCCATCTCTCCGCCTCTTAC
GGTATCTGTGCCGAGACAACTGCACGTCTAGTCAGAAACGTGGCGGTGCG
AACTCTTTAGGCTAATTGGGTGGCGTTTTCCGTGGTGCAAGAAAGCCAAT
ATACACACGACCCGCCTTGCTTAATTCCAACGCTTCCCAAGGCGTTCACC
CTGTGCAAGGTTTTTCGGGAGAGGCGACGGGCGAGTGGAAGGCGAATGTG
GATGCTATGACACGTATCTCGCCGCAGGGGCGACAAGAGATGATGCACTG
TAGCGTCCGAGGTTTATGAGAGAGAAAACCGTATTTCTGAGAGTGTTCGG
CTGCTTGTCCCGGCCATGAGGGAACCGTTTTCGGTATTTTTCACAAGTAC
GATTTAAAAGCAAGCTGGATTTTTAGAGGGAGTATTGTTAGCTTGTGCCA
ACCCTCTCATCAACCGTAGCCTGGAACATGGCGACAGGGGCAAGACCTCG
CGTAGATGGAACGCGTGTTGTATACATAGATGAATGCAGTGGGGGCGTGA
GGTTCTCTGGCGTCTGGTTTGGGCTTTGTACGTATTTGCGTGTCGTGTGC
ATCAGACTTGAAAATACGACGTTTTTGCTCTGAGGCAGGAGTAGGCGTAC
CGTAACGGGGTCGGTGCATGCCGCGATGAGAGTTGCATGTCTTGTGACCG
TGCGGTGACGACCACCGGGCTGTCGCGTCGTGGGGGTGAGGCGAGCGTGT
ATGTATCTACAGACCCGGGCCGCACCTAAGAACCGCTTATTTTTCGTGAG
GCTAGTTTTCTCACTTTGTCTATGGGTTAGACTACCCCCACAGCGATTAT
ACAGGTTCTAGTGTAACCTTCTTGACTGAGCACCCGTTCTAATGGTCAAG
TTATTTTAACACTAAACTTCTTAACTATTTCACCAAGTTCTTGAAGCGCC
GGCCGGTTCTTCTGTAGCACCAGTAGAGGTGTACTTAGATGGTCAATATG
ACGAGAGGGGCAATGTACACATGGGTTGCCAAACTGCAGAGCCTACCGGG
TGTTCCTTGTTTGCCAGAGGATTGCGATTCAATCTCCCTCCCTCTGCGTG
GCAAATCCAACAGGGGCTTCTTGTAGAGACAGGCTATTAAGTTGGGTGGG
GTTCAAGCTCGAATTTGTGTAGTGCTCAAGGTGTTTTGCGACCTCTCCTT
GTTTTGCGGCGCCATCTTACGTAAATAAGGAGAGGTCGATCCAAGCCTTG
CAGGCTCAACTCGGT
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Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1049:29314..36828-

>mRNA_E-siliculosus-1a_F_contig1049.350.1 ID=mRNA_E-siliculosus-1a_F_contig1049.350.1|Name=mRNA_E-siliculosus-1a_F_contig1049.350.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=990bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1049:29314..36828- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ATGATGATCACTGCATCCCACCACCCCCGACGATGATGATCACTGCATCC
CACCACCCCCGACGGACGTACCGGCAGTGCGCTCGGCAAGCGGCCGGCTG
CGTGGCATGCAGGACGTACCGGCAGTGCGCTCGGCAAGCGGCCGGCTGCG
TGGCATGCAGGTGGTTGCTGTTCGCGGCGTCGGCGGCGGTGTTTATCTTG
CGGGTCTACACCGAGAGGGGGTGGTACGTGGTGGCGTACTCCGTCGGCAT
CTTGGTCCTGAACAACACCGTGCAGTTTTTGACGCCCCGGGTGGTTGCTG
TTCGCGGCGTCGGCGGCGGTGTTTATCTTGCGGGTCTACACCGAGAGGGG
GTGGTACGTGGTGGCGTACTCCGTCGGCATCTTGGTCCTGAACAACACCG
TGCAGTTTTTGACGCCCCGGATTGGCCCGGACGCGGAGAGACTACGGGGC
CTCTCTGAACGGCGGCGGCATCGTTTCAGATTGGCCCGGACGCGGAGAGA
CTACGGGGCCTCTCTGAACGGCGGCGGCATCGTTTCAGGCTCTTCCGTCC
CCGAATCGGCGGCCGCCTAAGGGAGTTCCCGTGCTGGAGATCGTCGCAGA
AATGGCTGCTGGTAGCGCTCGCCATGACGTACTTCGGCCTGTTCGACATC
CCAGTGTACACACCGATTATTGTCGTGTACTTCGTCTTCCTCATGGCTCT
TCCGTCCCCGAATCGGCGGCCGCCTAAGGGAGTTCCCGTGCTGGAGATCG
TCGCAGAAATGGCTGCTGGTAGCGCTCGCCATGACGTACTTCGGCCTGTT
CGACATCCCAGTGTACACACCGATTATTGTCGTGTACTTCGTCTTCCTCA
TGGCGTTCACCCTGTGCAAGGTTTTTCGGGAGAGGCGACGGGCGAGTGGA
AGGCGAATGTGGATGCTATGAGCGTTCACCCTGTGCAAGGTTTTTCGGGA
GAGGCGACGGGCGAGTGGAAGGCGAATGTGGATGCTATGA
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