mRNA_E-siliculosus-1a_F_contig1041.319.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Homology

BLAST of mRNA_E-siliculosus-1a_F_contig1041.319.1 vs. uniprot
Match: D7G284_ECTSI (50S ribosomal protein L20 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G284_ECTSI)

HSP 1 Score: 208 bits (530), Expect = 3.920e-66
Identity = 111/120 (92.50%), Postives = 113/120 (94.17%), Query Frame = 1

Query:  253 MAANNHRHKKILKLAKGYRGRSKSVFKIAIQRVEKALQQAYRDRKARKGLLNYPDFRRLWIERINAGVRQHGMPYSVFVNKARKADVELNRKVLAEMAVTEPYSFRAVVETVKAKGSPKA 612
            MAANNHRHKKILKLAKGYRGRSKSVFKIAIQRVEKALQQAYRDRK +K      +FRRLWIERINAGVRQHGMPYSVFVNKARKADVELNRKVLAEMAVTEPYSFRAVVETVKAKGSPKA
Sbjct:    1 MAANNHRHKKILKLAKGYRGRSKSVFKIAIQRVEKALQQAYRDRKNKKR-----EFRRLWIERINAGVRQHGMPYSVFVNKARKADVELNRKVLAEMAVTEPYSFRAVVETVKAKGSPKA 115

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BLAST of mRNA_E-siliculosus-1a_F_contig1041.319.1 vs. uniprot
Match: W7TQD2_9STRA (50s ribosomal protein l20 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TQD2_9STRA)

HSP 1 Score: 137 bits (345), Expect = 1.590e-37
Identity = 88/161 (54.66%), Postives = 114/161 (70.81%), Query Frame = 1

Query:  115 SLVRPGCSSVARHRGGGLGAAVGGGSSSSRQGPCDALGQQQQQCRGMAANNHRHKKILKLAKGYRGRSKSVFKIAIQRVEKALQQAYRDRKARKGLLNYPDFRRLWIERINAGVRQHGMPYSVFVNKARKADVELNRKVLAEMAVTEPYSFRAVVETVKAK 597
            SLV    ++VA  R G    AV GG +S    PC   G   Q  R +A  NHRHKKI+K+AKGYRGR+ + F+IA+QRVEKALQ AYRDRK +K      +FR LWI+RI A V+Q+GM YS F+   R+A++ LNRKVLA++AV+EPYSF+AVVETV+++
Sbjct:    8 SLVLRRAATVATIRAGSQPDAVYGGIASI---PCLLKGPFLQPSRSLA--NHRHKKIVKMAKGYRGRT-NCFRIAVQRVEKALQYAYRDRKVKKR-----EFRSLWIQRIGAAVQQYGMNYSRFIPGLRRANITLNRKVLADLAVSEPYSFKAVVETVRSQ 157

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BLAST of mRNA_E-siliculosus-1a_F_contig1041.319.1 vs. uniprot
Match: A0A4P5SLS5_9PROT (50S ribosomal protein L20 n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A4P5SLS5_9PROT)

HSP 1 Score: 132 bits (333), Expect = 3.160e-36
Identity = 68/107 (63.55%), Postives = 86/107 (80.37%), Query Frame = 1

Query:  271 RHKKILKLAKGYRGRSKSVFKIAIQRVEKALQQAYRDRKARKGLLNYPDFRRLWIERINAGVRQHGMPYSVFVNKARKADVELNRKVLAEMAVTEPYSFRAVVETVK 591
            RHKKILKLAKGYRGR+K+ F++AI++VEKAL+ AYRDRKARK      DFR LWI+RINAGVR+HGM YS F+N  + A ++L+RKVLA++AV EP +F  +VE  K
Sbjct:   13 RHKKILKLAKGYRGRAKNCFRVAIEKVEKALRYAYRDRKARKR-----DFRSLWIQRINAGVREHGMIYSKFINGLKLAKIDLDRKVLADLAVREPETFAKIVEKAK 114

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BLAST of mRNA_E-siliculosus-1a_F_contig1041.319.1 vs. uniprot
Match: K2EJ18_9BACT (50S ribosomal protein L20 n=3 Tax=Bacteria TaxID=2 RepID=K2EJ18_9BACT)

HSP 1 Score: 132 bits (332), Expect = 4.470e-36
Identity = 67/103 (65.05%), Postives = 83/103 (80.58%), Query Frame = 1

Query:  271 RHKKILKLAKGYRGRSKSVFKIAIQRVEKALQQAYRDRKARKGLLNYPDFRRLWIERINAGVRQHGMPYSVFVNKARKADVELNRKVLAEMAVTEPYSFRAVV 579
            RHKK+LKLAKGYRGRSKS ++IA+QRVEKALQ AYRDR+ RK      DFR LWI+RINAG R+HGM YS FVN   +A +E++RKVLA++AV EP +F+ +V
Sbjct:   13 RHKKVLKLAKGYRGRSKSCYRIALQRVEKALQYAYRDRRTRKR-----DFRALWIQRINAGAREHGMTYSKFVNGLTRAGIEIDRKVLADLAVHEPIAFKEIV 110

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BLAST of mRNA_E-siliculosus-1a_F_contig1041.319.1 vs. uniprot
Match: A0A2S6SQA5_9PROT (50S ribosomal protein L20 n=1 Tax=Alphaproteobacteria bacterium MarineAlpha6_Bin1 TaxID=2013088 RepID=A0A2S6SQA5_9PROT)

HSP 1 Score: 132 bits (332), Expect = 4.740e-36
Identity = 62/107 (57.94%), Postives = 89/107 (83.18%), Query Frame = 1

Query:  271 RHKKILKLAKGYRGRSKSVFKIAIQRVEKALQQAYRDRKARKGLLNYPDFRRLWIERINAGVRQHGMPYSVFVNKARKADVELNRKVLAEMAVTEPYSFRAVVETVK 591
            RHKKILK+AKGYRGRSK+VF++AIQRVEKALQ AYRDR+ +K      +FR LWI+RINAG R+HGM YS F++  +KA++E++RK+L+++A+  P +F+++VE ++
Sbjct:   13 RHKKILKMAKGYRGRSKNVFRVAIQRVEKALQYAYRDRRTKKR-----NFRALWIQRINAGTREHGMSYSQFIHGIKKAEIEIDRKILSDIALNNPVTFKSIVEKIR 114

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BLAST of mRNA_E-siliculosus-1a_F_contig1041.319.1 vs. uniprot
Match: A0A1M3GWJ7_9PROT (50S ribosomal protein L20 n=1 Tax=Alphaproteobacteria bacterium 41-28 TaxID=1895706 RepID=A0A1M3GWJ7_9PROT)

HSP 1 Score: 131 bits (330), Expect = 8.940e-36
Identity = 66/104 (63.46%), Postives = 85/104 (81.73%), Query Frame = 1

Query:  271 RHKKILKLAKGYRGRSKSVFKIAIQRVEKALQQAYRDRKARKGLLNYPDFRRLWIERINAGVRQHGMPYSVFVNKARKADVELNRKVLAEMAVTEPYSFRAVVE 582
            RHKK+LKLAKGYRGRSK+ F+IAIQRVEKALQ AYRDR+ RK      DFR LWI+RINAG R+HG+ YS F+N   KA ++++RKVLA++AV EP +F+++V+
Sbjct:   13 RHKKVLKLAKGYRGRSKNCFRIAIQRVEKALQYAYRDRRNRKR-----DFRGLWIQRINAGTREHGLTYSKFINGLTKAGIDIDRKVLADLAVHEPAAFKSIVD 111

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BLAST of mRNA_E-siliculosus-1a_F_contig1041.319.1 vs. uniprot
Match: A0A7S3GYL0_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GYL0_9STRA)

HSP 1 Score: 132 bits (333), Expect = 9.020e-36
Identity = 70/118 (59.32%), Postives = 87/118 (73.73%), Query Frame = 1

Query:  238 QQCRGMAANNHRHKKILKLAKGYRGRSKSVFKIAIQRVEKALQQAYRDRKARKGLLNYPDFRRLWIERINAGVRQHGMPYSVFVNKARKADVELNRKVLAEMAVTEPYSFRAVVETVK 591
            Q  RGMA  N RHKK++KLAKGYRGR+   F +AIQRV KA Q AYRDRK +K      +FR LWI+RINA  R +G+PYS+ +NK  K D+ LNRKVL+E+A+TEP SF++VVE  K
Sbjct:   40 QAVRGMA--NQRHKKMIKLAKGYRGRANRCFTVAIQRVTKARQYAYRDRKVKKR-----EFRALWIQRINAASRMYGLPYSILINKMVKTDIALNRKVLSELAITEPLSFKSVVEVAK 150

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BLAST of mRNA_E-siliculosus-1a_F_contig1041.319.1 vs. uniprot
Match: A0A2A5BDS7_9RICK (50S ribosomal protein L20 n=1 Tax=Rickettsiales bacterium TaxID=2026788 RepID=A0A2A5BDS7_9RICK)

HSP 1 Score: 130 bits (327), Expect = 2.380e-35
Identity = 68/110 (61.82%), Postives = 86/110 (78.18%), Query Frame = 1

Query:  262 NNHRHKKILKLAKGYRGRSKSVFKIAIQRVEKALQQAYRDRKARKGLLNYPDFRRLWIERINAGVRQHGMPYSVFVNKARKADVELNRKVLAEMAVTEPYSFRAVVETVK 591
            + +RHKKI+K+AKGYRGR+K+ FKIAI++VEKALQ AYRDR+ RK      DFR LWI+RINA VRQH M YS F+   +KA +E++RK+LAEMAV +P SF  +VE VK
Sbjct:   10 SKNRHKKIIKMAKGYRGRAKNCFKIAIEKVEKALQYAYRDRRNRKR-----DFRGLWIQRINAAVRQHDMIYSTFMGGMKKAGIEVDRKMLAEMAVNDPASFTHIVEQVK 114

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BLAST of mRNA_E-siliculosus-1a_F_contig1041.319.1 vs. uniprot
Match: A0A7S2W484_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2W484_9STRA)

HSP 1 Score: 134 bits (336), Expect = 2.520e-35
Identity = 73/124 (58.87%), Postives = 94/124 (75.81%), Query Frame = 1

Query:  241 QCRGMAANNHRHKKILKLAKGYRGRSKSVFKIAIQRVEKALQQAYRDRKARKGLLNYPDFRRLWIERINAGVRQHGMPYSVFVNKAR-KADVELNRKVLAEMAVTEPYSFRAVVETVKAKGSPK 609
            Q R MA+   +HK +LK+AKGYRGRSK+ F+ AI+RVEKALQ AYRDRK +K      +FR+LWI+R+NAGVRQHGM YS F+  A   AD+ LNR++LAE++  EP+SF+AVV+ VK K  PK
Sbjct:  111 QSRTMASK--KHKAVLKMAKGYRGRSKNTFRAAIRRVEKALQYAYRDRKVKKR-----NFRKLWIQRLNAGVRQHGMSYSRFIRAAPLDADIVLNRRMLAELSTNEPFSFKAVVDVVKMKQQPK 227

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BLAST of mRNA_E-siliculosus-1a_F_contig1041.319.1 vs. uniprot
Match: A0A7X2KDB2_9PROT (50S ribosomal protein L20 n=1 Tax=Alphaproteobacteria bacterium HT1-32 TaxID=2665153 RepID=A0A7X2KDB2_9PROT)

HSP 1 Score: 130 bits (327), Expect = 2.530e-35
Identity = 67/108 (62.04%), Postives = 86/108 (79.63%), Query Frame = 1

Query:  271 RHKKILKLAKGYRGRSKSVFKIAIQRVEKALQQAYRDRKARKGLLNYPDFRRLWIERINAGVRQHGMPYSVFVNKARKADVELNRKVLAEMAVTEPYSFRAVVETVKA 594
            RHKK+LKLAKGYRGR+ + F+IA+++VEK LQ AYRDR+A+K       FR+LWI RINAGVRQHGM YS F+N  + A +EL+RKVLA+MA  EP SF+A+V+T +A
Sbjct:   13 RHKKVLKLAKGYRGRNSTNFRIALEKVEKGLQYAYRDRRAKKRT-----FRQLWITRINAGVRQHGMTYSQFMNGMKLAGIELDRKVLADMAALEPESFKALVDTARA 115

The following BLAST results are available for this feature:

BLAST of mRNA_E-siliculosus-1a_F_contig1041.319.1 vs. uniprot

BLAST of mRNA_E-siliculosus-1a_F_contig1041.319.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25

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POSITION

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Match Name	E-value	Identity	Description
D7G284_ECTSI	3.920e-66	92.50	50S ribosomal protein L20 n=1 Tax=Ectocarpus silic...	[more]
W7TQD2_9STRA	1.590e-37	54.66	50s ribosomal protein l20 n=1 Tax=Nannochloropsis ...	[more]
A0A4P5SLS5_9PROT	3.160e-36	63.55	50S ribosomal protein L20 n=1 Tax=Alphaproteobacte...	[more]
K2EJ18_9BACT	4.470e-36	65.05	50S ribosomal protein L20 n=3 Tax=Bacteria TaxID=2...	[more]
A0A2S6SQA5_9PROT	4.740e-36	57.94	50S ribosomal protein L20 n=1 Tax=Alphaproteobacte...	[more]
A0A1M3GWJ7_9PROT	8.940e-36	63.46	50S ribosomal protein L20 n=1 Tax=Alphaproteobacte...	[more]
A0A7S3GYL0_9STRA	9.020e-36	59.32	Hypothetical protein n=1 Tax=Spumella elongata Tax...	[more]
A0A2A5BDS7_9RICK	2.380e-35	61.82	50S ribosomal protein L20 n=1 Tax=Rickettsiales ba...	[more]
A0A7S2W484_9STRA	2.520e-35	58.87	Hypothetical protein n=1 Tax=Eucampia antarctica T...	[more]
A0A7X2KDB2_9PROT	2.530e-35	62.04	50S ribosomal protein L20 n=1 Tax=Alphaproteobacte...	[more]

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