mRNA_E-siliculosus-1a_F_contig1041.319.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_F_contig1041.319.1
Unique NamemRNA_E-siliculosus-1a_F_contig1041.319.1
TypemRNA
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Homology
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BLAST of mRNA_E-siliculosus-1a_F_contig1041.319.1 vs. uniprot
Match: D7G284_ECTSI (50S ribosomal protein L20 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G284_ECTSI)

HSP 1 Score: 208 bits (530), Expect = 3.920e-66
Identity = 111/120 (92.50%), Postives = 113/120 (94.17%), Query Frame = 1 
Query:  253 MAANNHRHKKILKLAKGYRGRSKSVFKIAIQRVEKALQQAYRDRKARKGLLNYPDFRRLWIERINAGVRQHGMPYSVFVNKARKADVELNRKVLAEMAVTEPYSFRAVVETVKAKGSPKA 612
            MAANNHRHKKILKLAKGYRGRSKSVFKIAIQRVEKALQQAYRDRK +K      +FRRLWIERINAGVRQHGMPYSVFVNKARKADVELNRKVLAEMAVTEPYSFRAVVETVKAKGSPKA
Sbjct:    1 MAANNHRHKKILKLAKGYRGRSKSVFKIAIQRVEKALQQAYRDRKNKKR-----EFRRLWIERINAGVRQHGMPYSVFVNKARKADVELNRKVLAEMAVTEPYSFRAVVETVKAKGSPKA 115
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BLAST of mRNA_E-siliculosus-1a_F_contig1041.319.1 vs. uniprot
Match: W7TQD2_9STRA (50s ribosomal protein l20 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TQD2_9STRA)

HSP 1 Score: 137 bits (345), Expect = 1.590e-37
Identity = 88/161 (54.66%), Postives = 114/161 (70.81%), Query Frame = 1 
Query:  115 SLVRPGCSSVARHRGGGLGAAVGGGSSSSRQGPCDALGQQQQQCRGMAANNHRHKKILKLAKGYRGRSKSVFKIAIQRVEKALQQAYRDRKARKGLLNYPDFRRLWIERINAGVRQHGMPYSVFVNKARKADVELNRKVLAEMAVTEPYSFRAVVETVKAK 597
            SLV    ++VA  R G    AV GG +S    PC   G   Q  R +A  NHRHKKI+K+AKGYRGR+ + F+IA+QRVEKALQ AYRDRK +K      +FR LWI+RI A V+Q+GM YS F+   R+A++ LNRKVLA++AV+EPYSF+AVVETV+++
Sbjct:    8 SLVLRRAATVATIRAGSQPDAVYGGIASI---PCLLKGPFLQPSRSLA--NHRHKKIVKMAKGYRGRT-NCFRIAVQRVEKALQYAYRDRKVKKR-----EFRSLWIQRIGAAVQQYGMNYSRFIPGLRRANITLNRKVLADLAVSEPYSFKAVVETVRSQ 157
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BLAST of mRNA_E-siliculosus-1a_F_contig1041.319.1 vs. uniprot
Match: A0A4P5SLS5_9PROT (50S ribosomal protein L20 n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A4P5SLS5_9PROT)

HSP 1 Score: 132 bits (333), Expect = 3.160e-36
Identity = 68/107 (63.55%), Postives = 86/107 (80.37%), Query Frame = 1 
Query:  271 RHKKILKLAKGYRGRSKSVFKIAIQRVEKALQQAYRDRKARKGLLNYPDFRRLWIERINAGVRQHGMPYSVFVNKARKADVELNRKVLAEMAVTEPYSFRAVVETVK 591
            RHKKILKLAKGYRGR+K+ F++AI++VEKAL+ AYRDRKARK      DFR LWI+RINAGVR+HGM YS F+N  + A ++L+RKVLA++AV EP +F  +VE  K
Sbjct:   13 RHKKILKLAKGYRGRAKNCFRVAIEKVEKALRYAYRDRKARKR-----DFRSLWIQRINAGVREHGMIYSKFINGLKLAKIDLDRKVLADLAVREPETFAKIVEKAK 114
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BLAST of mRNA_E-siliculosus-1a_F_contig1041.319.1 vs. uniprot
Match: K2EJ18_9BACT (50S ribosomal protein L20 n=3 Tax=Bacteria TaxID=2 RepID=K2EJ18_9BACT)

HSP 1 Score: 132 bits (332), Expect = 4.470e-36
Identity = 67/103 (65.05%), Postives = 83/103 (80.58%), Query Frame = 1 
Query:  271 RHKKILKLAKGYRGRSKSVFKIAIQRVEKALQQAYRDRKARKGLLNYPDFRRLWIERINAGVRQHGMPYSVFVNKARKADVELNRKVLAEMAVTEPYSFRAVV 579
            RHKK+LKLAKGYRGRSKS ++IA+QRVEKALQ AYRDR+ RK      DFR LWI+RINAG R+HGM YS FVN   +A +E++RKVLA++AV EP +F+ +V
Sbjct:   13 RHKKVLKLAKGYRGRSKSCYRIALQRVEKALQYAYRDRRTRKR-----DFRALWIQRINAGAREHGMTYSKFVNGLTRAGIEIDRKVLADLAVHEPIAFKEIV 110
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BLAST of mRNA_E-siliculosus-1a_F_contig1041.319.1 vs. uniprot
Match: A0A2S6SQA5_9PROT (50S ribosomal protein L20 n=1 Tax=Alphaproteobacteria bacterium MarineAlpha6_Bin1 TaxID=2013088 RepID=A0A2S6SQA5_9PROT)

HSP 1 Score: 132 bits (332), Expect = 4.740e-36
Identity = 62/107 (57.94%), Postives = 89/107 (83.18%), Query Frame = 1 
Query:  271 RHKKILKLAKGYRGRSKSVFKIAIQRVEKALQQAYRDRKARKGLLNYPDFRRLWIERINAGVRQHGMPYSVFVNKARKADVELNRKVLAEMAVTEPYSFRAVVETVK 591
            RHKKILK+AKGYRGRSK+VF++AIQRVEKALQ AYRDR+ +K      +FR LWI+RINAG R+HGM YS F++  +KA++E++RK+L+++A+  P +F+++VE ++
Sbjct:   13 RHKKILKMAKGYRGRSKNVFRVAIQRVEKALQYAYRDRRTKKR-----NFRALWIQRINAGTREHGMSYSQFIHGIKKAEIEIDRKILSDIALNNPVTFKSIVEKIR 114
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BLAST of mRNA_E-siliculosus-1a_F_contig1041.319.1 vs. uniprot
Match: A0A1M3GWJ7_9PROT (50S ribosomal protein L20 n=1 Tax=Alphaproteobacteria bacterium 41-28 TaxID=1895706 RepID=A0A1M3GWJ7_9PROT)

HSP 1 Score: 131 bits (330), Expect = 8.940e-36
Identity = 66/104 (63.46%), Postives = 85/104 (81.73%), Query Frame = 1 
Query:  271 RHKKILKLAKGYRGRSKSVFKIAIQRVEKALQQAYRDRKARKGLLNYPDFRRLWIERINAGVRQHGMPYSVFVNKARKADVELNRKVLAEMAVTEPYSFRAVVE 582
            RHKK+LKLAKGYRGRSK+ F+IAIQRVEKALQ AYRDR+ RK      DFR LWI+RINAG R+HG+ YS F+N   KA ++++RKVLA++AV EP +F+++V+
Sbjct:   13 RHKKVLKLAKGYRGRSKNCFRIAIQRVEKALQYAYRDRRNRKR-----DFRGLWIQRINAGTREHGLTYSKFINGLTKAGIDIDRKVLADLAVHEPAAFKSIVD 111
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BLAST of mRNA_E-siliculosus-1a_F_contig1041.319.1 vs. uniprot
Match: A0A7S3GYL0_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GYL0_9STRA)

HSP 1 Score: 132 bits (333), Expect = 9.020e-36
Identity = 70/118 (59.32%), Postives = 87/118 (73.73%), Query Frame = 1 
Query:  238 QQCRGMAANNHRHKKILKLAKGYRGRSKSVFKIAIQRVEKALQQAYRDRKARKGLLNYPDFRRLWIERINAGVRQHGMPYSVFVNKARKADVELNRKVLAEMAVTEPYSFRAVVETVK 591
            Q  RGMA  N RHKK++KLAKGYRGR+   F +AIQRV KA Q AYRDRK +K      +FR LWI+RINA  R +G+PYS+ +NK  K D+ LNRKVL+E+A+TEP SF++VVE  K
Sbjct:   40 QAVRGMA--NQRHKKMIKLAKGYRGRANRCFTVAIQRVTKARQYAYRDRKVKKR-----EFRALWIQRINAASRMYGLPYSILINKMVKTDIALNRKVLSELAITEPLSFKSVVEVAK 150
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BLAST of mRNA_E-siliculosus-1a_F_contig1041.319.1 vs. uniprot
Match: A0A2A5BDS7_9RICK (50S ribosomal protein L20 n=1 Tax=Rickettsiales bacterium TaxID=2026788 RepID=A0A2A5BDS7_9RICK)

HSP 1 Score: 130 bits (327), Expect = 2.380e-35
Identity = 68/110 (61.82%), Postives = 86/110 (78.18%), Query Frame = 1 
Query:  262 NNHRHKKILKLAKGYRGRSKSVFKIAIQRVEKALQQAYRDRKARKGLLNYPDFRRLWIERINAGVRQHGMPYSVFVNKARKADVELNRKVLAEMAVTEPYSFRAVVETVK 591
            + +RHKKI+K+AKGYRGR+K+ FKIAI++VEKALQ AYRDR+ RK      DFR LWI+RINA VRQH M YS F+   +KA +E++RK+LAEMAV +P SF  +VE VK
Sbjct:   10 SKNRHKKIIKMAKGYRGRAKNCFKIAIEKVEKALQYAYRDRRNRKR-----DFRGLWIQRINAAVRQHDMIYSTFMGGMKKAGIEVDRKMLAEMAVNDPASFTHIVEQVK 114
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BLAST of mRNA_E-siliculosus-1a_F_contig1041.319.1 vs. uniprot
Match: A0A7S2W484_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2W484_9STRA)

HSP 1 Score: 134 bits (336), Expect = 2.520e-35
Identity = 73/124 (58.87%), Postives = 94/124 (75.81%), Query Frame = 1 
Query:  241 QCRGMAANNHRHKKILKLAKGYRGRSKSVFKIAIQRVEKALQQAYRDRKARKGLLNYPDFRRLWIERINAGVRQHGMPYSVFVNKAR-KADVELNRKVLAEMAVTEPYSFRAVVETVKAKGSPK 609
            Q R MA+   +HK +LK+AKGYRGRSK+ F+ AI+RVEKALQ AYRDRK +K      +FR+LWI+R+NAGVRQHGM YS F+  A   AD+ LNR++LAE++  EP+SF+AVV+ VK K  PK
Sbjct:  111 QSRTMASK--KHKAVLKMAKGYRGRSKNTFRAAIRRVEKALQYAYRDRKVKKR-----NFRKLWIQRLNAGVRQHGMSYSRFIRAAPLDADIVLNRRMLAELSTNEPFSFKAVVDVVKMKQQPK 227
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BLAST of mRNA_E-siliculosus-1a_F_contig1041.319.1 vs. uniprot
Match: A0A7X2KDB2_9PROT (50S ribosomal protein L20 n=1 Tax=Alphaproteobacteria bacterium HT1-32 TaxID=2665153 RepID=A0A7X2KDB2_9PROT)

HSP 1 Score: 130 bits (327), Expect = 2.530e-35
Identity = 67/108 (62.04%), Postives = 86/108 (79.63%), Query Frame = 1 
Query:  271 RHKKILKLAKGYRGRSKSVFKIAIQRVEKALQQAYRDRKARKGLLNYPDFRRLWIERINAGVRQHGMPYSVFVNKARKADVELNRKVLAEMAVTEPYSFRAVVETVKA 594
            RHKK+LKLAKGYRGR+ + F+IA+++VEK LQ AYRDR+A+K       FR+LWI RINAGVRQHGM YS F+N  + A +EL+RKVLA+MA  EP SF+A+V+T +A
Sbjct:   13 RHKKVLKLAKGYRGRNSTNFRIALEKVEKGLQYAYRDRRAKKRT-----FRQLWITRINAGVRQHGMTYSQFMNGMKLAGIELDRKVLADMAALEPESFKALVDTARA 115
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1041.319.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G284_ECTSI3.920e-6692.5050S ribosomal protein L20 n=1 Tax=Ectocarpus silic... [more]
W7TQD2_9STRA1.590e-3754.6650s ribosomal protein l20 n=1 Tax=Nannochloropsis ... [more]
A0A4P5SLS5_9PROT3.160e-3663.5550S ribosomal protein L20 n=1 Tax=Alphaproteobacte... [more]
K2EJ18_9BACT4.470e-3665.0550S ribosomal protein L20 n=3 Tax=Bacteria TaxID=2... [more]
A0A2S6SQA5_9PROT4.740e-3657.9450S ribosomal protein L20 n=1 Tax=Alphaproteobacte... [more]
A0A1M3GWJ7_9PROT8.940e-3663.4650S ribosomal protein L20 n=1 Tax=Alphaproteobacte... [more]
A0A7S3GYL0_9STRA9.020e-3659.32Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
A0A2A5BDS7_9RICK2.380e-3561.8250S ribosomal protein L20 n=1 Tax=Rickettsiales ba... [more]
A0A7S2W484_9STRA2.520e-3558.87Hypothetical protein n=1 Tax=Eucampia antarctica T... [more]
A0A7X2KDB2_9PROT2.530e-3562.0450S ribosomal protein L20 n=1 Tax=Alphaproteobacte... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1041contigE-siliculosus-1a_F_contig1041:18728..21304 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Properties
Property NameValue
Start1
Stop1
Cds size552
Model size666
Exons4
Ec32 orthologEc-16_002100.1
Ec32 ortholog description50S ribosomal protein L20
Hectar predicted targeting categorymitochondrion
BRITEbr01610,ko00000,ko00001,ko00002,ko03011
Best eggNOG OGNA|NA|NA
Best tax levelEukaryota
COG Functional cat.J
EggNOG OGsCOG0292@1,KOG4707@2759
EggNOG free text desc.rRNA binding
KEGG ModuleM00178
KEGG Pathwayko03010,map03010
KEGG koko:K02887
Preferred namerpl20
Seed eggNOG ortholog2880.D7G284
Seed ortholog evalue4.9e-51
Seed ortholog score207.6
Taxonomic scopeEukaryota
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1041.319.1prot_E-siliculosus-1a_F_contig1041.319.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalepolypeptideE-siliculosus-1a_F_contig1041 18779..21241 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927545.3582113-UTR-E-siliculosus-1a_F_contig1041:18727..187781622927545.3582113-UTR-E-siliculosus-1a_F_contig1041:18727..18778Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1041 18728..18778 -
1696318577.7187464-UTR-E-siliculosus-1a_F_contig1041:18727..187781696318577.7187464-UTR-E-siliculosus-1a_F_contig1041:18727..18778Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1041 18728..18778 -
1622927545.4192307-UTR-E-siliculosus-1a_F_contig1041:21241..213041622927545.4192307-UTR-E-siliculosus-1a_F_contig1041:21241..21304Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1041 21242..21304 -
1696318577.7906196-UTR-E-siliculosus-1a_F_contig1041:21241..213041696318577.7906196-UTR-E-siliculosus-1a_F_contig1041:21241..21304Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1041 21242..21304 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927545.3708854-CDS-E-siliculosus-1a_F_contig1041:18778..188651622927545.3708854-CDS-E-siliculosus-1a_F_contig1041:18778..18865Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1041 18779..18865 -
1696318577.7322576-CDS-E-siliculosus-1a_F_contig1041:18778..188651696318577.7322576-CDS-E-siliculosus-1a_F_contig1041:18778..18865Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1041 18779..18865 -
1622927545.3854513-CDS-E-siliculosus-1a_F_contig1041:19703..198181622927545.3854513-CDS-E-siliculosus-1a_F_contig1041:19703..19818Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1041 19704..19818 -
1696318577.7511315-CDS-E-siliculosus-1a_F_contig1041:19703..198181696318577.7511315-CDS-E-siliculosus-1a_F_contig1041:19703..19818Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1041 19704..19818 -
1622927545.3963747-CDS-E-siliculosus-1a_F_contig1041:20225..203361622927545.3963747-CDS-E-siliculosus-1a_F_contig1041:20225..20336Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1041 20226..20336 -
1696318577.764235-CDS-E-siliculosus-1a_F_contig1041:20225..203361696318577.764235-CDS-E-siliculosus-1a_F_contig1041:20225..20336Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1041 20226..20336 -
1622927545.4066877-CDS-E-siliculosus-1a_F_contig1041:21002..212411622927545.4066877-CDS-E-siliculosus-1a_F_contig1041:21002..21241Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1041 21003..21241 -
1696318577.7766614-CDS-E-siliculosus-1a_F_contig1041:21002..212411696318577.7766614-CDS-E-siliculosus-1a_F_contig1041:21002..21241Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1041 21003..21241 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_F_contig1041.319.1

>prot_E-siliculosus-1a_F_contig1041.319.1 ID=prot_E-siliculosus-1a_F_contig1041.319.1|Name=mRNA_E-siliculosus-1a_F_contig1041.319.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=184bp
MSWSTVLSRVRPQALWSSLVRPGCSSVARHRGGGLGAAVGGGSSSSRQGP
CDALGQQQQQCRGMAANNHRHKKILKLAKGYRGRSKSVFKIAIQRVEKAL
QQAYRDRKARKGLLNYPDFRRLWIERINAGVRQHGMPYSVFVNKARKADV
ELNRKVLAEMAVTEPYSFRAVVETVKAKGSPKA*
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mRNA from alignment at E-siliculosus-1a_F_contig1041:18728..21304-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_F_contig1041.319.1 ID=mRNA_E-siliculosus-1a_F_contig1041.319.1|Name=mRNA_E-siliculosus-1a_F_contig1041.319.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=2577bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1041:18728..21304- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
CCTCACTCTTGCTCGGCTTGGTCTGCCGCGCAGTATCTGTAGCGTCCAGT
AGTTCTGGCAACAATGTCGTGGTCAACCGTGCTAAGCAGGGTGAGGCCGC
AAGCGCTGTGGTCGTCTCTTGTGAGACCAGGATGCTCATCGGTGGCGAGG
CATCGTGGAGGGGGGCTGGGAGCTGCTGTAGGCGGCGGCAGCAGCAGCTC
GCGACAAGGGCCGTGCGATGCGCTCGGTCAGCAGCAGCAGCAGTGCCGTG
GCATGGCAGCGAACAACCACAGGCATAAGAAAATCCTCAAGTTGGCGAAA
GGGTGAGTGGTGCTCCGTATAATATGTGGGCGTGCTGGTGTGAGAGCCCT
CATCACCAACATGACGGAAAGCACGCATGGGCGGGTACATCTACCGCACT
GCATTGCCATGCCTCGTATGCGAAGGTGTACTGCAGATACCTTGCCTGCA
ATGTCCGTTGTATTCACGCTTCGTAGTAAATATGACTGCTGCTGCTGTAG
GTGTGTTGGCTTACAATCTGATGCGTATTTCGCCCTTCATGTCTCCACTT
CGCTCCGTTTTTCACAGCTATCTGTTCGTATTTACATGTGGTCTGTAGTT
TGGACTCTGCTGTATCGCCGCCGCGTCTGGGGGAAGGGGGGAGAACGTTG
TCGCCGCTCCACACTAGGGGAACAGCGAAGCCATTCACGACAGTATTGTG
CGTTGTCTTCCCGCACATGAAACCTCTTTGCTCACGTTGCACACTTGCCA
CCCAAGACAAAACAATTGATCCACACTCGTGTAACCTACGAAGACTCACT
CGTAACCCCCCCCCCCCCAAGAGCCACAGCGTATATCGTACGTGCCGCCA
CCCCGCCCAACATCCCTCAACCCGGCAATACATTCACCGCGCACAGCGGG
TGCACCAGCCTAAGCATCGTCAATCCCACCCCCAACCCCTCCATGTTCTA
CCCCTGCACCTGGCGTAGGTATCGTGGAAGGAGCAAGAGCGTTTTCAAGA
TCGCCATCCAGAGGGTGGAGAAGGCGCTCCAGCAGGCCTACCGCGACAGA
AAGGCAAGGAAGGGCCTGCTGAATTACCCGTGGTTGTTTCTTTTCTCTGG
ATAGATAGAGATGGACTTGTTGTGCTGCGTCAAGAAAACGAAATGTCTTT
TGTGTGTTTGTACACGTGTAAGGAGCCCTCGGCTCTGGGGGAGGGTAAGG
TCCGGAGAGTGGTGACTATGACCTGCCACCGGAGGTTGGCTATTTTCGGG
TGTGTTGCATTGATTACATAGTCGTGTGAGTGAAGTTTGTACATGGCCGG
ATATGGATGTCCCTTTGCCATGCGCACTATGCTGTGTTGGTTTATAACCT
TGAATGCATCGCTCTGCTGTTGCACTATTGTCTGGCCAAGGCGAAACGCA
CGTTTCTGATGTGTACGTAAACACGTGTCTCTCTTCCTCCCCCTCCCCCC
CCCTCCGGATATTTCGTGTCCGCAGAACAAGAAGAGGGACTTCCGCAGAC
TGTGGATCGAGCGCATCAACGCCGGCGTGCGCCAGCACGGCATGCCGTAC
TCGGTGTTCGTCAACAAGGCCAGGAAAGCGGACGTGGAGTTGAACAGAAA
GGTGCATGGCTCGCGTGTGTGGGATTGGTCGCTTGCTGCGTTTGTTTTGT
GCTGCTGCATGTTATTTCGTCGCTATTCTCGTCAGATGGACCGGTACCAA
TGCATGGTACTGCGCAGAGCAGGAATGCTTTTTTCATGTGATGACAATAA
TAACAATAACAACAATTCTGGTTCGATGGGAGGGAAATTTCGTCCTCATC
CCAAACCCGAACAAGTTGGGTGCTGCGGTGTTTTTGAGCAGGAGAGACGG
CAGCAGTACAGTAGCAGGTCGACGTACGTGGGAATTAATCCGCGATTGAA
AACATTCGTCCATCACCTCTATCATAACCTGATGCTGTCGCGTCGATCGA
GGCTCACTGGTTTTGGCGTAGACGCGGCCTCCGTCTCCGCTGACAAGCTC
GAGCCCAAAATGCTGGTCGTGACTTTGCCCAGCTGGAGACACCATGCTAC
TTTTTCTTTTGTAGTTCCTTGATGAAATGTGTCGGGCGGGAATACAAGCC
GTTTCTATTGAGCCACGACGTCACCAGCCAGCGATTGACATGATCCCTGC
ACGACTACGGCAGGAGACGGGAGTTTTGTCGGAGGCACTCTTGTTTTTTT
TTTTTTGCCGTCCGTCCGTAAACAAGGGAGTGGCCTCTTTGGGGTTATCT
TGCCGACATCGCCGAACTCTGTGTGCACGAGTTACTGCGACAAGCCAGCA
TCATGTCACCCTTCGGATTTGGCTCAACGCCGCCCTGCCCTGCCCTGCCC
GGCTCCTTACCCACCCACGCGCCCCCTTCGTGTGTCCTTCCTTCCCTCGC
CTTTCTTCTGTACTGCATGACGCTCTCGCTTGGTGATAGGTGCTGGCCGA
GATGGCGGTCACGGAGCCGTACAGCTTCCGTGCCGTGGTGGAGACGGTCA
AGGCGAAGGGGTCGCCCAAAGCATAGCGCGGCGGGGGCGGGGCGGGGGGA
AGGGGTAGGGCGTGTTGGCGTAGTGAG
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Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1041:18728..21304-

>mRNA_E-siliculosus-1a_F_contig1041.319.1 ID=mRNA_E-siliculosus-1a_F_contig1041.319.1|Name=mRNA_E-siliculosus-1a_F_contig1041.319.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=1104bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1041:18728..21304- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ATGTCGTGGTCAACCGTGCTAAGCAGGGTGAGGCCGCAAGCGCTGTGGTC
GTCTCTTGTGAGACCAGGATGCTCATCGGTGGCGAGGCATCGTGGAGGGG
GGCTGGGAGCTGCTGTAGGCGGCGGCAGCAGCAGCTCGCGACAAGGGCCG
TGCGATGCGCTCGGTCAGCAGCAGCAGCAGTGCCGTGGCATGGCAGCGAA
CAACCACAGGCATAAGAAAATCCTCAAGTTGGCGAAAGGATGTCGTGGTC
AACCGTGCTAAGCAGGGTGAGGCCGCAAGCGCTGTGGTCGTCTCTTGTGA
GACCAGGATGCTCATCGGTGGCGAGGCATCGTGGAGGGGGGCTGGGAGCT
GCTGTAGGCGGCGGCAGCAGCAGCTCGCGACAAGGGCCGTGCGATGCGCT
CGGTCAGCAGCAGCAGCAGTGCCGTGGCATGGCAGCGAACAACCACAGGC
ATAAGAAAATCCTCAAGTTGGCGAAAGGGTATCGTGGAAGGAGCAAGAGC
GTTTTCAAGATCGCCATCCAGAGGGTGGAGAAGGCGCTCCAGCAGGCCTA
CCGCGACAGAAAGGCAAGGAAGGGCCTGCTGAATTACCCGTATCGTGGAA
GGAGCAAGAGCGTTTTCAAGATCGCCATCCAGAGGGTGGAGAAGGCGCTC
CAGCAGGCCTACCGCGACAGAAAGGCAAGGAAGGGCCTGCTGAATTACCC
GGACTTCCGCAGACTGTGGATCGAGCGCATCAACGCCGGCGTGCGCCAGC
ACGGCATGCCGTACTCGGTGTTCGTCAACAAGGCCAGGAAAGCGGACGTG
GAGTTGAACAGAAAGGGACTTCCGCAGACTGTGGATCGAGCGCATCAACG
CCGGCGTGCGCCAGCACGGCATGCCGTACTCGGTGTTCGTCAACAAGGCC
AGGAAAGCGGACGTGGAGTTGAACAGAAAGGTGCTGGCCGAGATGGCGGT
CACGGAGCCGTACAGCTTCCGTGCCGTGGTGGAGACGGTCAAGGCGAAGG
GGTCGCCCAAAGCATAGGTGCTGGCCGAGATGGCGGTCACGGAGCCGTAC
AGCTTCCGTGCCGTGGTGGAGACGGTCAAGGCGAAGGGGTCGCCCAAAGC
ATAG
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