Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1039.300.1 vs. uniprot
Match:
D7FT35_ECTSI (Hypothetical leucine rich repeat protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FT35_ECTSI)
HSP 1 Score: 401 bits (1030), Expect = 1.990e-135
Identity = 288/332 (86.75%), Postives = 290/332 (87.35%), Query Frame = 0
Query: 107 MMEALKRSSDVDTVNFHNAGLTGASIDVLVEGLQHTTVRCLALDYNTPPVVXXXXXXXXXXXXXXXXXXXXAEAVVATEGSSSLTRNFAGLVREGSKLKALSLRGNALEDAEVIALAEAIEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLLLAGGYEVLPPEQEKRAAADVKIAAQNKLAADAMKKKKDAKVETRLPLSAVTVRTGEDGRSRAVAGGSRSLAALNLADNRDLGEGGALAGLLSRIVNARKEEAEEAGXXXXXXXXXGAVVLQELHLTRCQGYAEEAGGEDDTAIAAMSFALRPTKVVV 438
MMEALKRSSDVDTV+FHNAGLTGASIDVLVEGL HTTVRC ALDYNT PVV EA ATEG SSLTRNFAGLV EGSKLKALSLRGNAL DAE IALAEAIE XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLLLAGGYEVLP EQEKRAAADVKIAAQNKLAADAMKKKKDAKVETRLPLSAVTVRTGEDGRSRAVAGGSRSLAALNLADNRDLGEGGALAGLLSRIVNARKEEA EAG G+VVLQELHLTRCQGYAEEAGGEDDTAIAAMSFALRPTKVVV
Sbjct: 1 MMEALKRSSDVDTVDFHNAGLTGASIDVLVEGLPHTTVRCFALDYNTLPVVLSSSSPPTRPPPSGPTEPALEEAP-ATEGFSSLTRNFAGLVSEGSKLKALSLRGNALGDAEAIALAEAIEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLLLAGGYEVLPAEQEKRAAADVKIAAQNKLAADAMKKKKDAKVETRLPLSAVTVRTGEDGRSRAVAGGSRSLAALNLADNRDLGEGGALAGLLSRIVNARKEEAGEAGEGAGFGAGGGSVVLQELHLTRCQGYAEEAGGEDDTAIAAMSFALRPTKVVV 331
BLAST of mRNA_E-siliculosus-1a_F_contig1039.300.1 vs. uniprot
Match:
A0A836CBK8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBK8_9STRA)
HSP 1 Score: 60.1 bits (144), Expect = 3.470e-6
Identity = 52/193 (26.94%), Postives = 81/193 (41.97%), Query Frame = 0
Query: 42 KPAGSFDADYAALCRLFEVPAHPCLASRLPGDTRNQDASAAAASKTTS-------STIQLRNFAVDLTTVRLMMEALKRSSDVDTVNFHNAGLTGASIDVLVEGLQHTTVRCLALDYNTPPVVXXXXXXXXXXXXXXXXXXXXAEAVVATEGSSSLTRNFAGLVREGSKLKALSLRGNALEDAEVIALAEAIE 227
K GSF DY LC L V HPC+ L S+A S S + + N +D ++ L+++AL + V ++ HNAGL +++ + L T + L++ +N PV FA L+ +G+ L+AL+LRG+A+ A ALA A+E
Sbjct: 26 KACGSFKGDYLQLCSLAGVIPHPCILPALRTAPSGDVNSSATLSHNASRYDMKDGDRVNVSNHVLDPASLALLLKALSLNPAVTALDLHNAGLATSAVAAIAAALPTTALSALSISFN--PVDDDTV--------------------------------FAKLLADGTALRALTLRGDAVASAGAAALAAALE 184
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1039.300.1 vs. uniprot
Analysis Date: 2022-09-16 (
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90 )
Total hits: 2
M V E A E K L P S A V R T K T K H S D P W Q A T T M D E E A E C L D W A A K D G Q K P A G S F D A D Y A A L C R L F E V P A H P C L A S R L P G D T R N Q D A S A A A A S K T T S S T I Q L R N F A V D L T T V R L M M E A L K R S S D V D T V N F H N A G L T G A S I D V L V E G L Q H T T V R C L A L D Y N T P P V V L S S S S P P T R T P S S G T T E P A A A E A V V A T E G S S S L T R N F A G L V R E G S K L K A L S L R G N A L E D A E V I A L A E A I E E N T V L C S L N L F D N K I T D V G A S A F A A T L R I N T V L R G L S L A R N S L T P A S A E A F G L L L A G G Y E V L P P E Q E K R A A A D V K I A A Q N K L A A D A M K K K K D A K V E T R L P L S A V T V R T G E D G R S R A V A G G S R S L A A L N L A D N R D L G E G G A L A G L L S R I V N A R K E E A E E A G A G A G F G A G G G A V V L Q E L H L T R C Q G Y A E E A G G E D D T A I A A M S F A L R P T K V V V * 50 100 150 200 250 300 350 400 Expect = 1.99e-135 / Id = 86.75 Expect = 3.47e-6 / Id = 26.94 Sequence D7FT35_ECTSI A0A836CBK8_9STRA
Match Name E-value Identity Description
D7FT35_ECTSI 1.990e-135 86.75 Hypothetical leucine rich repeat protein n=2 Tax=E... [more] A0A836CBK8_9STRA 3.470e-6 26.94 Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
back to top
InterPro
Analysis Name:
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
M V E A E K L P S A V R T K T K H S D P W Q A T T M D E E A E C L D W A A K D G Q K P A G S F D A D Y A A L C R L F E V P A H P C L A S R L P G D T R N Q D A S A A A A S K T T S S T I Q L R N F A V D L T T V R L M M E A L K R S S D V D T V N F H N A G L T G A S I D V L V E G L Q H T T V R C L A L D Y N T P P V V L S S S S P P T R T P S S G T T E P A A A E A V V A T E G S S S L T R N F A G L V R E G S K L K A L S L R G N A L E D A E V I A L A E A I E E N T V L C S L N L F D N K I T D V G A S A F A A T L R I N T V L R G L S L A R N S L T P A S A E A F G L L L A G G Y E V L P P E Q E K R A A A D V K I A A Q N K L A A D A M K K K K D A K V E T R L P L S A V T V R T G E D G R S R A V A G G S R S L A A L N L A D N R D L G E G G A L A G L L S R I V N A R K E E A E E A G A G A G F G A G G G A V V L Q E L H L T R C Q G Y A E E A G G E D D T A I A A M S F A L R P T K V V V * 50 100 150 200 250 300 350 400 Expect = 0.27 / Score = 20.3 Expect = 1.9 / Score = 15.1 Expect = 8.5 / Score = 10.6 Expect = 89.0 / Score = 3.4 Score = Score = Expect = 9.8E-4 / Score = 19.0 Sequence SM00368 PTHR46984 SSF52047 PF13516
IPR Term IPR Description Source Source Term Source Description Alignment
None No IPR available SMART SM00368 LRR_RI_2 coord: 201..228 None No IPR available PANTHER PTHR46984 FAMILY NOT NAMED coord: 191..279 None No IPR available SUPERFAMILY 52047 RNI-like coord: 93..280 IPR001611 Leucine-rich repeat PFAM PF13516 LRR_6 coord: 229..251
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence
>prot_E-siliculosus-1a_F_contig1039.300.1 ID=prot_E-siliculosus-1a_F_contig1039.300.1|Name=mRNA_E-siliculosus-1a_F_contig1039.300.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=439bp back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
Term Definition
IPR001611 Leu-rich_rpt