Homology
BLAST of mRNA_E-siliculosus-1a_F_contig10365.288.1 vs. uniprot
Match:
A0A6H5JUC1_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUC1_9PHAE)
HSP 1 Score: 66.2 bits (160), Expect = 2.090e-9
Identity = 29/43 (67.44%), Postives = 36/43 (83.72%), Query Frame = 1
Query: 1 GKYVEAEPLYERCQTIEENVLGPDHPSLASTLDNRAGMLSAQG 129
GKY EAEPLY+RCQ ++ LGP+HPSLA+TL+NRA +L AQG
Sbjct: 187 GKYSEAEPLYDRCQAMKGKALGPEHPSLAATLNNRAELLRAQG 229
BLAST of mRNA_E-siliculosus-1a_F_contig10365.288.1 vs. uniprot
Match:
A0A6H5JJK0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJK0_9PHAE)
HSP 1 Score: 66.2 bits (160), Expect = 2.350e-9
Identity = 29/42 (69.05%), Postives = 35/42 (83.33%), Query Frame = 1
Query: 1 GKYVEAEPLYERCQTIEENVLGPDHPSLASTLDNRAGMLSAQ 126
GKY +AEPLYERCQ I E LGP+HP +A+TL+NRAG+L AQ
Sbjct: 941 GKYTDAEPLYERCQAIYEKRLGPEHPYVATTLNNRAGLLEAQ 982
BLAST of mRNA_E-siliculosus-1a_F_contig10365.288.1 vs. uniprot
Match:
A0A6H5K3K8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3K8_9PHAE)
HSP 1 Score: 59.7 bits (143), Expect = 6.620e-9
Identity = 27/42 (64.29%), Postives = 34/42 (80.95%), Query Frame = 1
Query: 1 GKYVEAEPLYERCQTIEENVLGPDHPSLASTLDNRAGMLSAQ 126
GKY+EAEPLYER Q I+E VLG +HP +AS+L+NR +L AQ
Sbjct: 19 GKYMEAEPLYERSQAIQEKVLGLEHPDVASSLNNRVELLRAQ 60
BLAST of mRNA_E-siliculosus-1a_F_contig10365.288.1 vs. uniprot
Match:
UPI0013D29528 (tetratricopeptide repeat protein n=1 Tax=Desulfobacter hydrogenophilus TaxID=2291 RepID=UPI0013D29528)
HSP 1 Score: 58.5 bits (140), Expect = 2.450e-8
Identity = 26/38 (68.42%), Postives = 31/38 (81.58%), Query Frame = 1
Query: 1 GKYVEAEPLYERCQTIEENVLGPDHPSLASTLDNRAGM 114
GKY EAEPLY+R I E VLGPDHPS+A+TL+N AG+
Sbjct: 5 GKYEEAEPLYQRALKIRETVLGPDHPSVATTLNNLAGL 42
BLAST of mRNA_E-siliculosus-1a_F_contig10365.288.1 vs. uniprot
Match:
A0A6H5KIY6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIY6_9PHAE)
HSP 1 Score: 62.0 bits (149), Expect = 5.910e-8
Identity = 28/42 (66.67%), Postives = 34/42 (80.95%), Query Frame = 1
Query: 1 GKYVEAEPLYERCQTIEENVLGPDHPSLASTLDNRAGMLSAQ 126
GKY +AEPL ER QTI E VLGP+HP +A +L+NRAG+L AQ
Sbjct: 499 GKYDDAEPLNERSQTIREKVLGPEHPDVAQSLNNRAGLLEAQ 540
BLAST of mRNA_E-siliculosus-1a_F_contig10365.288.1 vs. uniprot
Match:
A0A6H5KXS7_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXS7_9PHAE)
HSP 1 Score: 62.0 bits (149), Expect = 6.220e-8
Identity = 27/42 (64.29%), Postives = 34/42 (80.95%), Query Frame = 1
Query: 1 GKYVEAEPLYERCQTIEENVLGPDHPSLASTLDNRAGMLSAQ 126
GKY EAEPLYER Q I+ENVLGP+HP + ++L+NRA +L Q
Sbjct: 661 GKYAEAEPLYERSQAIQENVLGPEHPDVGTSLNNRALLLEKQ 702
BLAST of mRNA_E-siliculosus-1a_F_contig10365.288.1 vs. uniprot
Match:
A0A6H5K5H9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5H9_9PHAE)
HSP 1 Score: 60.8 bits (146), Expect = 8.110e-8
Identity = 27/42 (64.29%), Postives = 33/42 (78.57%), Query Frame = 1
Query: 1 GKYVEAEPLYERCQTIEENVLGPDHPSLASTLDNRAGMLSAQ 126
GKY EAEPLYER Q I E LGP+HP++A+ L+NRAG+L Q
Sbjct: 31 GKYAEAEPLYERWQAIFETALGPEHPNVATALNNRAGLLEDQ 72
BLAST of mRNA_E-siliculosus-1a_F_contig10365.288.1 vs. uniprot
Match:
D7G722_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G722_ECTSI)
HSP 1 Score: 60.5 bits (145), Expect = 2.290e-7
Identity = 26/39 (66.67%), Postives = 32/39 (82.05%), Query Frame = 1
Query: 1 GKYVEAEPLYERCQTIEENVLGPDHPSLASTLDNRAGML 117
GKY EAEPLYER I+E VLGP+HP +A++LDNRA +L
Sbjct: 694 GKYAEAEPLYERSLAIQEKVLGPEHPDVATSLDNRASLL 732
BLAST of mRNA_E-siliculosus-1a_F_contig10365.288.1 vs. uniprot
Match:
A0A6H5JPL8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPL8_9PHAE)
HSP 1 Score: 60.1 bits (144), Expect = 2.480e-7
Identity = 28/42 (66.67%), Postives = 31/42 (73.81%), Query Frame = 1
Query: 1 GKYVEAEPLYERCQTIEENVLGPDHPSLASTLDNRAGMLSAQ 126
GKY EA PLY RCQ I+E VLGPDHP LA+TL N A +L Q
Sbjct: 22 GKYTEAGPLYARCQAIQEAVLGPDHPRLATTLGNWAALLYEQ 63
BLAST of mRNA_E-siliculosus-1a_F_contig10365.288.1 vs. uniprot
Match:
D7G6W2_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6W2_ECTSI)
HSP 1 Score: 60.1 bits (144), Expect = 3.140e-7
Identity = 27/42 (64.29%), Postives = 33/42 (78.57%), Query Frame = 1
Query: 1 GKYVEAEPLYERCQTIEENVLGPDHPSLASTLDNRAGMLSAQ 126
GKY EA+PLY R I EN LGPDHP+LA+ L+NRAG+L +Q
Sbjct: 613 GKYAEADPLYLRAIEIGENTLGPDHPALATQLNNRAGLLGSQ 654
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig10365.288.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90 )
Total hits: 23
0 1 Expect = 2.09e-9 / Id = 67.44 Expect = 2.35e-9 / Id = 69.05 Expect = 6.62e-9 / Id = 64.29 Expect = 2.45e-8 / Id = 68.42 Expect = 5.91e-8 / Id = 66.67 Expect = 6.22e-8 / Id = 64.29 Expect = 8.11e-8 / Id = 64.29 Expect = 2.29e-7 / Id = 66.67 Expect = 2.48e-7 / Id = 66.67 Expect = 3.14e-7 / Id = 64.29 Sequence A0A6H5JUC1_9PHAE A0A6H5JJK0_9PHAE A0A6H5K3K8_9PHAE UPI0013D29528 A0A6H5KIY6_9PHAE A0A6H5KXS7_9PHAE A0A6H5K5H9_9PHAE D7G722_ECTSI A0A6H5JPL8_9PHAE D7G6W2_ECTSI Pages
back to top
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig10365.288.1
>prot_E-siliculosus-1a_F_contig10365.288.1 ID=prot_E-siliculosus-1a_F_contig10365.288.1|Name=mRNA_E-siliculosus-1a_F_contig10365.288.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=186bp
GKYVEAEPLYERCQTIEENVLGPDHPSLASTLDNRAGMLSAQGKFAEAQP back to top mRNA from alignment at E-siliculosus-1a_F_contig10365:1129..2539+
Legend: polypeptide CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_F_contig10365.288.1 ID=mRNA_E-siliculosus-1a_F_contig10365.288.1|Name=mRNA_E-siliculosus-1a_F_contig10365.288.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=1411bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig10365:1129..2539+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)GGCAAATACGTGGAGGCGGAGCCACTCTATGAGCGGTGTCAGACGATAGA
GGAGAACGTCCTAGGTCCTGACCACCCAAGCTTGGCCTCAACGCTCGACA
ACCGGGCGGGGATGTTGAGCGCCCAG GTGAGAGCCGACAGAATTTTCCAG
GAAATATCTTGTAGTGTTCTATGAATATTGCGCAGTGCTTAACAACCAGA
CGCTTATGTTAAAGAATCAGGTAAGGGCCATCAATGTTTCCGGGCTCTTT
TTTTTGTGGTGATCGGTGGATGTTGTAGGGCGGCGTGCACAAGAACCGGG
CGGGGTTGCTGATGAGTCAGGTGAGAGCCAAGCGATTCTCTTCGTTCTAG
AAGATGCTTCGGATGCCCCTTGAAAGCTTTTCTAGATGTTTCTAGATGCC
TCGAGGCCTCCTTTCTGGTTCTAGAACACTTGGGACAATTTTGGCACGGT
GTCAATGGTCTGGGAGGCTGTTGTTTCTTCCGTCAATTCATGTCACGGTG
GGAACTTTGCTACGGAACATGGGGGTGCCACCGTAATTTCGCTGTCACCT
TGACATGTGTAAACTGTTCTCGAACTTTTCTTACAGGGAAAGTTCGCTGA
GGCGCAGCCGTTGTTCGAAAGAGCTCTGGCAATCAATGAAGTTGCTCTGG
GGGTGGACCACCCGAGCACGATCACGTCTCGTGCGTGGATGGCGGACTTG
TACAAGAATCAGGGTTTCCTGGACAAGGCTTCTCCTCTGTTGGAGGAGGT
TGTGAGCGCCCGTGAGCGTGTTCAAGGACGTGACCATCCGGATGTCGCTT
CAGCGCTCAACAACAGGGCGGGGTTGTTGAGAGCGCAG GTGAGAGGAGTG
AGAATTTTCCAAGATATTTCGTAGGGTTCACACTTGTTTTGAGAGTTTGG
GGCGGGGTTGTTGATGAGCCAGATGAAAGTCAAACGATGTTCTAGAAGCT
TCAAGCAAAAATATCCTCCGCAGTTCTAGATCCCACTTGTGCTGAAACAA
GACCCACGCTGTCGACGCCATTCCAGGGGAAGTATGAGGAGGCCGAGCCG
CTGTATGAGCGGTCACAGGCCATACGGGAGAAGGTGCTAGGTCCTGAGCA
CCCTGATGTAGCCCAGTCGCTCAACAACAGGGCGGAGTTGTTGAGAGCGC
AG GTGAGAGCCATCAGAAATTCCAGGAAGTTTCTTGTGGTACCCGATAGA
TTTCGGGAGTGCTGAACGACAGGGCGTTGTTGTTGGAAAGTCAGGTGAGA
GCCAAATAATGCTTCTAGATTCTCTTCTATCTAAAAGGTAATGTTTCTCC
GCAGTTCTAGATCCCACTTGTGCTGAAACAAGACCCACGCTGTCGACGCC
ATTCCAGGGGAAGTATGAGGAGGCCGAGCCGCTGTATGAGCGGTCACAGG
CCATACGGGAG back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig10365:1129..2539+
>mRNA_E-siliculosus-1a_F_contig10365.288.1 ID=mRNA_E-siliculosus-1a_F_contig10365.288.1|Name=mRNA_E-siliculosus-1a_F_contig10365.288.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=1116bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig10365:1129..2539+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female) back to top