mRNA_E-siliculosus-1a_F_contig1030.255.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Homology

BLAST of mRNA_E-siliculosus-1a_F_contig1030.255.1 vs. uniprot
Match: D8LR18_ECTSI (RING-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LR18_ECTSI)

HSP 1 Score: 540 bits (1390), Expect = 4.060e-179
Identity = 410/549 (74.68%), Postives = 416/549 (75.77%), Query Frame = 1

Query:   73 MDATCWMCQRCGHEVPIDNREVHEAQCRRNSPAQLLSPPPVTGAPPSPFDPDDQPFSRNVFTPAQPPAAEGAAPTPSQPWREVDIRAAAASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLRRQVQEWEQRQDWERSFTSSSSTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGETTTTWACAACTYLNDFGVSRCDMCGTRMSPQQRPPDATYRDTLIGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEDDQGLLDGRTTISGAAAGSAIGAIGGALLSAVQPGARASGVMSSMFQGALMGXXAXAALGGLSDEPGAGXXXXXXXXXXXXXRSSDNEFRRQRRR---QVSSFEYVRGPTARVRRGRDVVSEMESLMLARRLEALSLPASAAAMRREGRGAXXXAEAGSSVYEGILRQLAEAHNHDAGGXXXXXXXXASPASARAIAALPGETLTAGALAHLKDDGRQCCICLEDFEAGEKATRLPCLHLYHTACIENWLQTSGTCPQCKFRVD 1710
            MDATCW+CQRCGHEVPIDNREVHEAQCRRNSPAQLLSPPPVTG+PPSPFDPD+QPFSRNVFTPAQPPAAE AA    QP         AASXXXXXXXXXXX                                          ST                                   SG+TTT WACAACTYLNDFGVSRCDMCGTRMSPQQRPPDATYRDTLIG   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX D QGLLDGRTTISGAAAGSAIGAIGGALLSAVQPGARASGVMSSMFQGALMG  A AALGGLSDEPGAGXXXXXXXXXXXXX                QVSSFE+VRGPTARVRRGRDVVSEMESLMLARRLEALSLPASAAAMRREG   XXX    SS+Y GILRQLAEA NHDA G   XXXX  SPASARAIAALPGE LTAGALAHLKDDGRQCCICLEDFEAGEKATRLPCLHLYHT CIENWLQTSGTCPQCKFRVD
Sbjct:    1 MDATCWVCQRCGHEVPIDNREVHEAQCRRNSPAQLLSPPPVTGSPPSPFDPDNQPFSRNVFTPAQPPAAEAAARESGQPCGFAAAGRGAASXXXXXXXXXXX------------------------------------------STEGEGE------------------------------SGDTTT-WACAACTYLNDFGVSRCDMCGTRMSPQQRPPDATYRDTLIGGGVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXD-QGLLDGRTTISGAAAGSAIGAIGGALLSAVQPGARASGVMSSMFQGALMGGMAGAALGGLSDEPGAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQVSSFEFVRGPTARVRRGRDVVSEMESLMLARRLEALSLPASAAAMRREG--GXXXXXXXSSIYAGILRQLAEAQNHDAAGGDAXXXXGTSPASARAIAALPGEALTAGALAHLKDDGRQCCICLEDFEAGEKATRLPCLHLYHTVCIENWLQTSGTCPQCKFRVD 473

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BLAST of mRNA_E-siliculosus-1a_F_contig1030.255.1 vs. uniprot
Match: A0A6H5L176_9PHAE (RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L176_9PHAE)

HSP 1 Score: 477 bits (1227), Expect = 6.490e-153
Identity = 439/638 (68.81%), Postives = 451/638 (70.69%), Query Frame = 1

Query:   73 MDATCWMCQRCGHEVPIDNREVHEAQCRRNSPAQLLSPP-----PVTGAPPSPFDPDDQPFSRNVFTPAQPPAAEGAAPTPSQPWREVDIRAAAASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLRRQVQEWEQRQDWERSFTSSSSTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-------------------------------------------------------------------------------------SGETTTTWACAACTYLNDFGVSRCDMCGTRMSPQQRPPDATYRDTLIGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEDDQGLLDGRTTISGAAAGSAIGAIGGALLSAVQPGARASGVMSSMFQGALMGXXAXAALGGLSDEPGAGXXXXXXXXXXXXXRSSDNE--FRRQRRRQVSSFEYVRGPTARVRRGRDVVSEMESLMLARRLEALSLPASAAAMRREGRGAXXXAEAGSSVYEGILRQLAEAHNHDAGGXXXXXXXXASPASARAIAALPGETLTAGALAHLKDDGRQCCICLEDFEAGEKATRLPCLHLYHTACIENWLQTSGTCPQCKFRVD 1710
            MDAT WMCQRCGHEVPIDNREVHEAQCRRNSPA+LLSP      PVTG+ PSPFDPDD P SRNVFTPAQPPAAE AAPTPSQPWREVDIRAAAASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLRRQVQEWEQRQDWERSFTSSS T         XXXXXXXXXXX XXXXXXXXXXXXXX                                                                                     SGETTTTWACAACTYLNDFGVSRCDMCGTRMSPQQRPPDATYRDTLIGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  EDDQGLLDGR+TISGAAAGSAI           QP                  XX XAALGGLS+EPGAG   XXXXXXXXXX        FRRQ RRQVSS E+VRGPTARVRRGRD VSE+ESLMLAR L+A                              ILR+LAEAHNHDA G XXXXXXXASPASARAIAALPGETLTAG+LAHLKDDGRQCCICLE+FEAGE+ATRLPCLHLYH+ CIENWLQTSGTCPQCKFRVD
Sbjct:    1 MDATYWMCQRCGHEVPIDNREVHEAQCRRNSPARLLSPSAAAARPVTGSLPSPFDPDDLPVSRNVFTPAQPPAAEAAAPTPSQPWREVDIRAAAASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLRRQVQEWEQRQDWERSFTSSSPTDASSDSGFAXXXXXXXXXXXAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGASSTEGEGKSGETTTTWACAACTYLNDFGVSRCDMCGTRMSPQQRPPDATYRDTLIGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--EDDQGLLDGRSTISGAAAGSAIXXXXXXXXXXXQPXXXXXXXXXXXXXXXXXXXXXXAALGGLSNEPGAGGDSXXXXXXXXXXXXXXXXXXFRRQWRRQVSSVEFVRGPTARVRRGRDAVSEVESLMLAR-LDAR-----------------------------ILRRLAEAHNHDAAGGXXXXXXXASPASARAIAALPGETLTAGSLAHLKDDGRQCCICLEEFEAGERATRLPCLHLYHSVCIENWLQTSGTCPQCKFRVD 606

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BLAST of mRNA_E-siliculosus-1a_F_contig1030.255.1 vs. uniprot
Match: A0A0L0FCC5_9EUKA (RING-type domain-containing protein (Fragment) n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0FCC5_9EUKA)

HSP 1 Score: 93.6 bits (231), Expect = 7.900e-19
Identity = 40/69 (57.97%), Postives = 49/69 (71.01%), Query Frame = 1

Query: 1504 IAALPGETLTAGALAHLKDDGRQCCICLEDFEAGEKATRLPCLHLYHTACIENWLQTSGTCPQCKFRVD 1710
            I ALP ETL+  A+A L++  + CCICLEDF+AGEK  RLPCLH YH  CI+ WL   GTCP CK  ++
Sbjct:   54 IHALPTETLSKAAIAKLEEGSQNCCICLEDFKAGEKMKRLPCLHTYHDHCIDEWLSRRGTCPVCKHALE 122

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BLAST of mRNA_E-siliculosus-1a_F_contig1030.255.1 vs. uniprot
Match: A0A8J6CPI3_9ROSI (RING-type domain-containing protein n=1 Tax=Gossypium anomalum TaxID=47600 RepID=A0A8J6CPI3_9ROSI)

HSP 1 Score: 77.8 bits (190), Expect = 5.350e-13
Identity = 32/73 (43.84%), Postives = 46/73 (63.01%), Query Frame = 1

Query: 1483 SPASARAIAALPGETLTAGALAHLKDDGRQCCICLEDFEAGEKATRLPCLHLYHTACIENWLQTSGTCPQCKF 1701
            +PAS  +I A+PG          ++  G+ CCICLE+FE  E+   +PC H++H+ CIE WL+  GTCP C+F
Sbjct:   35 APASKASIEAMPG--------IKVEKSGKDCCICLEEFEVDEEGREMPCKHVFHSGCIEKWLEIHGTCPICRF 99

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BLAST of mRNA_E-siliculosus-1a_F_contig1030.255.1 vs. uniprot
Match: A0A2P6R2V5_ROSCH (Putative aminoacyltransferase, E1 ubiquitin-activating enzyme n=1 Tax=Rosa chinensis TaxID=74649 RepID=A0A2P6R2V5_ROSCH)

HSP 1 Score: 79.3 bits (194), Expect = 6.930e-13
Identity = 40/108 (37.04%), Postives = 59/108 (54.63%), Query Frame = 1

Query: 1384 EAGSSVYEGILRQLAEAHNHDAGGXXXXXXXXASPASARAIAALPGETLTAGALAHLKDDGRQCCICLEDFEAGEKATRLPCLHLYHTACIENWLQTSGTCPQCKFRV 1707
            E+GS   + ++RQLA+  +               PAS  +IAA+P  T+         + GR+C ICL+ FE G +A  +PC HL+H  C+E WL+  GTCP C+F +
Sbjct:   72 ESGSGGIDSLMRQLAKDGH--------------PPASKASIAAMPTVTVA--------ESGRECPICLDQFEVGGEAKEMPCSHLFHGDCVEKWLKVHGTCPVCRFTM 157

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BLAST of mRNA_E-siliculosus-1a_F_contig1030.255.1 vs. uniprot
Match: A0A2P5YC45_GOSBA (RING-type domain-containing protein n=4 Tax=Gossypium TaxID=3633 RepID=A0A2P5YC45_GOSBA)

HSP 1 Score: 77.0 bits (188), Expect = 1.720e-12
Identity = 32/73 (43.84%), Postives = 46/73 (63.01%), Query Frame = 1

Query: 1483 SPASARAIAALPGETLTAGALAHLKDDGRQCCICLEDFEAGEKATRLPCLHLYHTACIENWLQTSGTCPQCKF 1701
            +PAS  +I A+P           +++ G+ CCICLE+FE  E+   +PC HL+H+ CIE WL+  GTCP C+F
Sbjct:   35 TPASKASIKAMPR--------IQVEESGKDCCICLEEFEVDEEGRAMPCKHLFHSGCIEKWLEIHGTCPICRF 99

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BLAST of mRNA_E-siliculosus-1a_F_contig1030.255.1 vs. uniprot
Match: A0A4D9BPB7_SALSN (RING-type domain-containing protein n=1 Tax=Salvia splendens TaxID=180675 RepID=A0A4D9BPB7_SALSN)

HSP 1 Score: 77.0 bits (188), Expect = 3.270e-12
Identity = 35/74 (47.30%), Postives = 47/74 (63.51%), Query Frame = 1

Query: 1486 PASARAIAALPGETLTAGALAHLKDDGRQCCICLEDFEAGEKATRLPCLHLYHTACIENWLQTSGTCPQCKFRV 1707
            PAS  AI A+    +  G     ++ G QC ICLED+EAGEKA R+PC H +H  CIE WL+  G+CP C++ +
Sbjct:   90 PASKAAIDAMETVEVVVGE----EEGGDQCVICLEDWEAGEKAKRMPCKHTFHGECIEKWLKIDGSCPVCRYEM 159

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BLAST of mRNA_E-siliculosus-1a_F_contig1030.255.1 vs. uniprot
Match: A0A1U8I433_GOSHI (E3 ubiquitin-protein ligase RING1-like n=20 Tax=Gossypium TaxID=3633 RepID=A0A1U8I433_GOSHI)

HSP 1 Score: 75.5 bits (184), Expect = 4.510e-12
Identity = 31/72 (43.06%), Postives = 46/72 (63.89%), Query Frame = 1

Query: 1486 PASARAIAALPGETLTAGALAHLKDDGRQCCICLEDFEAGEKATRLPCLHLYHTACIENWLQTSGTCPQCKF 1701
            PAS  +I A+P           +++ G+ CCICLE+FE  E+   +PC H++H++CIE WL+  GTCP C+F
Sbjct:   36 PASKASIEAMPR--------IKVEETGKDCCICLEEFEVDEEGREMPCKHVFHSSCIEKWLEIHGTCPICRF 99

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BLAST of mRNA_E-siliculosus-1a_F_contig1030.255.1 vs. uniprot
Match: A0A5D2F4P4_GOSDA (RING-type domain-containing protein n=1 Tax=Gossypium darwinii TaxID=34276 RepID=A0A5D2F4P4_GOSDA)

HSP 1 Score: 77.0 bits (188), Expect = 4.980e-12
Identity = 32/73 (43.84%), Postives = 46/73 (63.01%), Query Frame = 1

Query: 1483 SPASARAIAALPGETLTAGALAHLKDDGRQCCICLEDFEAGEKATRLPCLHLYHTACIENWLQTSGTCPQCKF 1701
            +PAS  +I A+P           +++ G+ CCICLE+FE  E+   +PC HL+H+ CIE WL+  GTCP C+F
Sbjct:   35 TPASKASIKAMPR--------IQVEESGKDCCICLEEFEVDEEGRAMPCKHLFHSGCIEKWLEIHGTCPICRF 99

[Close]

BLAST of mRNA_E-siliculosus-1a_F_contig1030.255.1 vs. uniprot
Match: A0A7S2I4A8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2I4A8_9STRA)

HSP 1 Score: 75.1 bits (183), Expect = 7.650e-12
Identity = 33/76 (43.42%), Postives = 50/76 (65.79%), Query Frame = 1

Query: 1480 ASPASARAIAALPGETLTAGALAHLKDDGRQCCICLEDFEAGEKATRLPCLHLYHTACIENWLQTSGTCPQCKFRV 1707
            A PAS +AI  LP  ++T   L  + ++ R+CCICL++   G++ TRLPC H++H  CI +WL  S TCP C++ +
Sbjct:   61 APPASKKAILQLPTVSVTPEDL--VDENNRECCICLDENNLGDRVTRLPCAHIFHQKCIYDWLLKSCTCPVCRYEL 134

The following BLAST results are available for this feature:

BLAST of mRNA_E-siliculosus-1a_F_contig1030.255.1 vs. uniprot

BLAST of mRNA_E-siliculosus-1a_F_contig1030.255.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25

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POSITION

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Match Name	E-value	Identity	Description
D8LR18_ECTSI	4.060e-179	74.68	RING-type domain-containing protein n=1 Tax=Ectoca...	[more]
A0A6H5L176_9PHAE	6.490e-153	68.81	RING-type domain-containing protein n=1 Tax=Ectoca...	[more]
A0A0L0FCC5_9EUKA	7.900e-19	57.97	RING-type domain-containing protein (Fragment) n=1...	[more]
A0A8J6CPI3_9ROSI	5.350e-13	43.84	RING-type domain-containing protein n=1 Tax=Gossyp...	[more]
A0A2P6R2V5_ROSCH	6.930e-13	37.04	Putative aminoacyltransferase, E1 ubiquitin-activa...	[more]
A0A2P5YC45_GOSBA	1.720e-12	43.84	RING-type domain-containing protein n=4 Tax=Gossyp...	[more]
A0A4D9BPB7_SALSN	3.270e-12	47.30	RING-type domain-containing protein n=1 Tax=Salvia...	[more]
A0A1U8I433_GOSHI	4.510e-12	43.06	E3 ubiquitin-protein ligase RING1-like n=20 Tax=Go...	[more]
A0A5D2F4P4_GOSDA	4.980e-12	43.84	RING-type domain-containing protein n=1 Tax=Gossyp...	[more]
A0A7S2I4A8_9STRA	7.650e-12	43.42	Hypothetical protein (Fragment) n=1 Tax=Helicothec...	[more]

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Relationships

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_E-siliculosus-1a_F_contig1030.255.1	prot_E-siliculosus-1a_F_contig1030.255.1	Ectocarpus siliculosus Ec863f_EcPH12_90f female	polypeptide	E-siliculosus-1a_F_contig1030 7659..10763 +

The following UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1622927534.298132-UTR-E-siliculosus-1a_F_contig1030:7586..7658	1622927534.298132-UTR-E-siliculosus-1a_F_contig1030:7586..7658	Ectocarpus siliculosus Ec863f_EcPH12_90f female	UTR	E-siliculosus-1a_F_contig1030 7587..7658 +
1696318572.5602634-UTR-E-siliculosus-1a_F_contig1030:7586..7658	1696318572.5602634-UTR-E-siliculosus-1a_F_contig1030:7586..7658	Ectocarpus siliculosus Ec863f_EcPH12_90f female	UTR	E-siliculosus-1a_F_contig1030 7587..7658 +
1622927534.3486087-UTR-E-siliculosus-1a_F_contig1030:10763..12232	1622927534.3486087-UTR-E-siliculosus-1a_F_contig1030:10763..12232	Ectocarpus siliculosus Ec863f_EcPH12_90f female	UTR	E-siliculosus-1a_F_contig1030 10764..12232 +
1696318572.5977166-UTR-E-siliculosus-1a_F_contig1030:10763..12232	1696318572.5977166-UTR-E-siliculosus-1a_F_contig1030:10763..12232	Ectocarpus siliculosus Ec863f_EcPH12_90f female	UTR	E-siliculosus-1a_F_contig1030 10764..12232 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1622927534.3171928-CDS-E-siliculosus-1a_F_contig1030:7658..7700	1622927534.3171928-CDS-E-siliculosus-1a_F_contig1030:7658..7700	Ectocarpus siliculosus Ec863f_EcPH12_90f female	CDS	E-siliculosus-1a_F_contig1030 7659..7700 +
1696318572.5728729-CDS-E-siliculosus-1a_F_contig1030:7658..7700	1696318572.5728729-CDS-E-siliculosus-1a_F_contig1030:7658..7700	Ectocarpus siliculosus Ec863f_EcPH12_90f female	CDS	E-siliculosus-1a_F_contig1030 7659..7700 +
1622927534.330153-CDS-E-siliculosus-1a_F_contig1030:9164..10763	1622927534.330153-CDS-E-siliculosus-1a_F_contig1030:9164..10763	Ectocarpus siliculosus Ec863f_EcPH12_90f female	CDS	E-siliculosus-1a_F_contig1030 9165..10763 +
1696318572.5838225-CDS-E-siliculosus-1a_F_contig1030:9164..10763	1696318572.5838225-CDS-E-siliculosus-1a_F_contig1030:9164..10763	Ectocarpus siliculosus Ec863f_EcPH12_90f female	CDS	E-siliculosus-1a_F_contig1030 9165..10763 +

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at E-siliculosus-1a_F_contig1030:7587..12232+
coding sequence from alignment at E-siliculosus-1a_F_contig1030:7587..12232+

protein sequence of mRNA_E-siliculosus-1a_F_contig1030.255.1

>prot_E-siliculosus-1a_F_contig1030.255.1 ID=prot_E-siliculosus-1a_F_contig1030.255.1|Name=mRNA_E-siliculosus-1a_F_contig1030.255.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=547bp
MDATCWMCQRCGHEVPIDNREVHEAQCRRNSPAQLLSPPPVTGAPPSPFD
PDDQPFSRNVFTPAQPPAAEGAAPTPSQPWREVDIRAAAASAANRTARTA
AVTSAEERERRQQEQLQQRQQRLRRQVQEWEQRQDWERSFTSSSSTDASS
DSGFASAGRGAAAAAVATGARGASSTEGEGKSGETTTTWACAACTYLNDF
GVSRCDMCGTRMSPQQRPPDATYRDTLIGGGGGSGGRRRRQAGAAGDLES
AAEEARCRMLAAEAAARDRNGVSTSGGGSGGRGGEDDQGLLDGRTTISGA
AAGSAIGAIGGALLSAVQPGARASGVMSSMFQGALMGGMAGAALGGLSDE
PGAGGGSGGGSGGGGGARSSDNEFRRQRRRQVSSFEYVRGPTARVRRGRD
VVSEMESLMLARRLEALSLPASAAAMRREGRGAGAGAEAGSSVYEGILRQ
LAEAHNHDAGGGDAGGGGGASPASARAIAALPGETLTAGALAHLKDDGRQ
CCICLEDFEAGEKATRLPCLHLYHTACIENWLQTSGTCPQCKFRVD*

mRNA from alignment at E-siliculosus-1a_F_contig1030:7587..12232+

Legend: UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_E-siliculosus-1a_F_contig1030.255.1 ID=mRNA_E-siliculosus-1a_F_contig1030.255.1|Name=mRNA_E-siliculosus-1a_F_contig1030.255.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=4646bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1030:7587..12232+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
CACCCGTCCACAGCAGCACGACACAGGACACAGCAGCGATCGGCAAGCGG
GGGGCCCACGACAGCATAGAAAATGGATGCGACATGTTGGATGTGTCAAC
GCTGTGGGCACGAGGTGAGGGCTGTGACGAATGAAGGGTTATTTGTTGGC
ATTTACTTTGTCCGCCGTGCATGACATGATGAATTTTATTTGGGAAATTC
TCTTCCGTCGTATTGCCTACCTACGTACACACAATTTTCGTCTCCGCCGT
GTACGTTCCATGTATTGTAGCCCTGCCTCCGGGTGCTATCGGCTTGAACC
TCATGCACCATGAATAATTTTTAAAGAGATCTTCATTGCTTGCGTCTTCT
CTGGCCTTATCCATGGTGTGCGATGGTTGGTCTAAACTACGCGCGGTACG
CGGATTTTCCGCGAACCAACCAAATCAAGTTGTAGCATGGTTGCAGTCAC
AGCAGTAGTCTATGTTTACAGCAGTGAGTGTCGGCTTTGTAAATCGGCAG
CGGCGTGCACTACGATTTACACTGGTGTAGTTCAGCCGGACGTGGTCACC
GTGACTTTCTGGCTCCCGCCCAGAGTTCTCAAAATGATTTGTGCGTCCAA
AGGATAAATGTAAGTTTCTGGGGAATCCTCACACGATACAAGTACTCACC
AAGAAGATGTGGAAAGGTAGACAGGAGCAGTGTTCGACGTATCGTACCTT
TCTAACTGCTGTTCCAGCAGCTGCGCGCTGGCGATGCTCATTGAACTCAG
GGTAGTGATGCCAGTGTCGACCAGACTCATCTCGTACTTGATCGTTTCCC
TAGCAGCATCTCCGCCAACACCCGCGTCAATGTATTCGCCACGTGTTACT
ACGTCGATTGGACAGGACGTCAGATTTGGTTGGCACTATTTAATGCGTTA
GATCCGCCCGCGTTACACGCTTACTTATTTCGACTGCAATTTTTTGTACG
ACTTGCGTTGTTTCTCGAAATACCGTATTGGTTGACGCTTGAGCCGCGGC
GCGATGGCGCTGCTTCCCGTGATTTTGTCACGTTCCGGCCCTACCTATGC
GTCGGGTTCTTCGTTCGGCGTTCTCCTTTTCCGGATTTTTCTTGTCGAGA
AAAACTGGAACATGCGGCGGAACTCTTTTTCAAAGAAGTTTGTGACCCGC
CGCTTAAGCCCACGTCTCAGTTATCACCTGGCAGAAAACTCCCTGTGCCC
TTGGATTTAAACCTAGAATTGGAGTGCTTTTCGTCCAGGTTTTACTCGGC
GCCGCCATCAATTGTGCCTTTCGCTCTTCAACGCCAAGTGCCGACGACTT
CGCGACAAAGCAGAAGCCGGGGGGAACGAACTCCACCGTCGCATTCCAAG
CTGGCTGCTACTTATCATGACCAAGCTTATTTAAACCAAGATTCAATGTA
TAGGCTAAATTCAACAGACTCAACATAAACCCAGTTTCCAGCCGATTTCC
CTCCTCTCACTGAAAAGACTTCAGCACATCCCTTTCGACTACGATGATGT
CTCGAACGGGCAGTCTTTCTAATAGCAACCCCGCATTGTTTGTCCGCACG
CCTTAACTCGCTCCTTGCCCCACCGCAGGTGCCGATCGACAACCGCGAGG
TGCACGAAGCGCAGTGCCGGCGTAACTCGCCGGCCCAACTGCTTTCGCCG
CCGCCGGTGACAGGTGCCCCGCCATCCCCGTTCGATCCCGACGACCAGCC
TTTCTCCCGAAACGTCTTCACCCCTGCTCAGCCTCCGGCGGCGGAGGGGG
CTGCCCCGACTCCCTCGCAGCCGTGGCGAGAGGTTGACATTCGAGCGGCA
GCCGCCTCCGCTGCCAATAGGACGGCCAGAACTGCGGCGGTAACGTCGGC
GGAAGAGCGGGAGCGGAGGCAGCAGGAGCAGCTGCAGCAACGGCAACAGC
GCCTGCGGCGGCAGGTGCAGGAGTGGGAGCAGCGCCAGGACTGGGAGCGA
TCGTTCACTTCTTCTTCTTCTACCGACGCTTCTTCGGACAGCGGGTTCGC
GTCCGCCGGGCGCGGCGCAGCGGCGGCCGCCGTCGCTACCGGGGCTCGGG
GCGCGTCGTCCACGGAGGGCGAGGGCAAGTCGGGTGAGACTACAACAACC
TGGGCTTGCGCTGCGTGCACGTACCTGAACGACTTTGGCGTGTCGCGATG
CGACATGTGCGGCACCAGGATGTCCCCCCAGCAGCGCCCACCGGACGCCA
CCTACCGGGACACCCTGATCGGCGGCGGCGGTGGCAGCGGCGGACGGCGG
CGGAGGCAGGCGGGGGCGGCGGGCGATCTCGAGTCCGCTGCCGAGGAGGC
GCGGTGCAGGATGTTGGCGGCGGAGGCCGCTGCTAGGGACAGAAACGGCG
TCAGCACTAGCGGCGGCGGGAGCGGGGGCAGAGGGGGCGAGGACGACCAG
GGCCTTCTCGACGGCCGGACCACCATCTCCGGCGCTGCGGCGGGGTCCGC
CATCGGAGCGATCGGCGGGGCACTGCTCTCGGCGGTGCAGCCCGGCGCCC
GGGCGTCCGGCGTCATGTCCTCCATGTTCCAGGGCGCTCTCATGGGCGGC
ATGGCGGGGGCCGCGCTCGGGGGCCTCAGCGATGAGCCCGGAGCAGGCGG
CGGCAGCGGCGGCGGCAGCGGCGGCGGCGGCGGCGCCAGGAGTTCCGACA
ACGAGTTTCGAAGGCAACGGCGGAGACAGGTGTCTTCTTTCGAATATGTC
CGAGGTCCGACGGCCCGCGTGCGAAGAGGAAGGGACGTGGTCTCGGAGAT
GGAGTCTCTGATGCTGGCGCGACGGCTGGAGGCGCTGAGCCTGCCGGCAT
CAGCGGCGGCGATGCGGCGTGAAGGGCGCGGGGCGGGGGCGGGAGCGGAA
GCGGGGTCATCGGTATATGAAGGGATTTTGCGACAGCTGGCGGAAGCGCA
CAACCACGACGCCGGCGGCGGTGACGCCGGCGGCGGGGGGGGAGCGAGTC
CCGCCTCCGCCCGGGCGATCGCGGCGCTACCGGGGGAGACGCTGACGGCC
GGCGCGCTCGCGCACCTCAAGGATGACGGGCGGCAGTGCTGCATCTGTCT
CGAGGACTTCGAGGCAGGGGAGAAGGCGACGCGGCTGCCGTGCCTCCACC
TGTACCACACCGCGTGCATCGAAAACTGGCTCCAGACCTCGGGGACGTGT
CCGCAGTGCAAGTTCAGGGTGGATTGAGTTTCGTCCAATCTTGACTGTCG
ATGAGAATTAACGCTTAGCCCCCCTCGGCTTGACTTGGTTTGGCGTAAGT
GTTTAAGAGTACCCCTCAGCCCTCTTGATCTTAGAGTTCCGGCTGAGATC
GTTCTTTATGCGTCATCGATCTCTGCTCTTGACGTTACCGCTACTGTATA
TACTCCTTGGCTGAGGGAGACAAAGGATGGGTAAAGAAGAGAACTAACGC
AAAGAGCGAATTGCATTTTTTTGCACGTGTTGGGGCCGCCTCTAAAAGTC
AATTGTGGCTGTCTGGGTGGAGGCCCGAAAAAGTTCACTGCTTGTGACCA
CCCGAAAGGGGGCGGAGGCGGTGCATTGGGCGGATCCGAAAAAAGCCGTG
CAACAGGTGTCCGTTCCATTTTGTGGGGAGGGTCGCAGATGCAATTTGGC
ACGGATCAAGAGGACTTCAGTTGGTACCAGATCACGTCGAGAGCTTCGCA
AAGCGACAGCACATGGGTGTCGCTGTTTCTGCGAGGTTGACTACGAAACG
ATTCGCGATTGAGGTAGAGGAGTTCTTTCATGCGAGGTTGCTCTCACGAA
AAGGCAGCAGCTACTCCGCAGCGTCTGCAATGATGTAGCTGCAACAAGGT
CGCTACGGTCGTCCGGTCATCCGCCGCGCGCACGCGGCTATCTTAACACC
TCAGGCCAAACGGCCTGCAATTCTCCGGGCGTATGTGTTTGAGAGTAACG
CTCAACCCTCTAGGCTTGTCTTGACTTGGCTTGAATGTTGAGAGTAGCGC
CCACCCTCTTGACCTTTGAGTTGATTTGGCTTCGTGGGCGAAGAGTAACG
CCCAACACGGTTGACCTTTGAGTTGACTTGGCTTGGGTGTTGACCGTAGC
GCCTTACTGTGTCGTTTGTTTTTTGTCGTTTGTTTTTTTCTCGTGTTGTA
CCGGGTGTCTTGGCTCGGACCAGCAGGCACACGGTTTGTCTTGCGCAAGG
ACCTCTGCTTCTCTGCTTGCCGAAGGCAATACAACTCGCCTTCCGCGATG
CAATGCATGCAGACGGGGCTCTCCCGCGGTCTGCGTGTATGCATGTAGGC
ATGTCACTCGAAACCTTCGAGAGGGCGGACCAGGCGACGTGAACCCGCTT
GACGACCTGACTTGACTTGATCTTGTTTGAGAATAACGGTTGTTTGGGGT
GGAGGGGGCTGCGTGTTTTTTTGCTTTTTCCCGAGTCTGGGCTGGGCTCA
CCAATCACACGGTTGGTAGTGTCACGGAAGACCACACTACCATGGTACGC
CGAAGTGGTACACTTGATTTGGTGCGGTGCGGTGTAGACGGGCCCCTCCC
GTGGGCTGCATGAGGGTGTCCCCTCGAAGTTTTTGGAGGAGGTCCAAGGG
TGGTCCAAGTCCGAGCCTACATGTAGGAGAGTGTCATCCAAGAAAAAAGG
GATAATAGTCACGTCAAGATCGCATGCACCTCGATAAGGAAGGCGC

Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1030:7587..12232+

>mRNA_E-siliculosus-1a_F_contig1030.255.1 ID=mRNA_E-siliculosus-1a_F_contig1030.255.1|Name=mRNA_E-siliculosus-1a_F_contig1030.255.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=3282bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1030:7587..12232+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ATGGATGCGACATGTTGGATGTGTCAACGCTGTGGGCACGAGATGGATGC
GACATGTTGGATGTGTCAACGCTGTGGGCACGAGGTGCCGATCGACAACC
GCGAGGTGCACGAAGCGCAGTGCCGGCGTAACTCGCCGGCCCAACTGCTT
TCGCCGCCGCCGGTGACAGGTGCCCCGCCATCCCCGTTCGATCCCGACGA
CCAGCCTTTCTCCCGAAACGTCTTCACCCCTGCTCAGCCTCCGGCGGCGG
AGGGGGCTGCCCCGACTCCCTCGCAGCCGTGGCGAGAGGTTGACATTCGA
GCGGCAGCCGCCTCCGCTGCCAATAGGACGGCCAGAACTGCGGCGGTAAC
GTCGGCGGAAGAGCGGGAGCGGAGGCAGCAGGAGCAGCTGCAGCAACGGC
AACAGCGCCTGCGGCGGCAGGTGCAGGAGTGGGAGCAGCGCCAGGACTGG
GAGCGATCGTTCACTTCTTCTTCTTCTACCGACGCTTCTTCGGACAGCGG
GTTCGCGTCCGCCGGGCGCGGCGCAGCGGCGGCCGCCGTCGCTACCGGGG
CTCGGGGCGCGTCGTCCACGGAGGGCGAGGGCAAGTCGGGTGAGACTACA
ACAACCTGGGCTTGCGCTGCGTGCACGTACCTGAACGACTTTGGCGTGTC
GCGATGCGACATGTGCGGCACCAGGATGTCCCCCCAGCAGCGCCCACCGG
ACGCCACCTACCGGGACACCCTGATCGGCGGCGGCGGTGGCAGCGGCGGA
CGGCGGCGGAGGCAGGCGGGGGCGGCGGGCGATCTCGAGTCCGCTGCCGA
GGAGGCGCGGTGCAGGATGTTGGCGGCGGAGGCCGCTGCTAGGGACAGAA
ACGGCGTCAGCACTAGCGGCGGCGGGAGCGGGGGCAGAGGGGGCGAGGAC
GACCAGGGCCTTCTCGACGGCCGGACCACCATCTCCGGCGCTGCGGCGGG
GTCCGCCATCGGAGCGATCGGCGGGGCACTGCTCTCGGCGGTGCAGCCCG
GCGCCCGGGCGTCCGGCGTCATGTCCTCCATGTTCCAGGGCGCTCTCATG
GGCGGCATGGCGGGGGCCGCGCTCGGGGGCCTCAGCGATGAGCCCGGAGC
AGGCGGCGGCAGCGGCGGCGGCAGCGGCGGCGGCGGCGGCGCCAGGAGTT
CCGACAACGAGTTTCGAAGGCAACGGCGGAGACAGGTGTCTTCTTTCGAA
TATGTCCGAGGTCCGACGGCCCGCGTGCGAAGAGGAAGGGACGTGGTCTC
GGAGATGGAGTCTCTGATGCTGGCGCGACGGCTGGAGGCGCTGAGCCTGC
CGGCATCAGCGGCGGCGATGCGGCGTGAAGGGCGCGGGGCGGGGGCGGGA
GCGGAAGCGGGGTCATCGGTATATGAAGGGATTTTGCGACAGCTGGCGGA
AGCGCACAACCACGACGCCGGCGGCGGTGACGCCGGCGGCGGGGGGGGAG
CGAGTCCCGCCTCCGCCCGGGCGATCGCGGCGCTACCGGGGGAGACGCTG
ACGGCCGGCGCGCTCGCGCACCTCAAGGATGACGGGCGGCAGTGCTGCAT
CTGTCTCGAGGACTTCGAGGCAGGGGAGAAGGCGACGCGGCTGCCGTGCC
TCCACCTGTACCACACCGCGTGCATCGAAAACTGGCTCCAGACCTCGGGG
ACGTGTCCGCAGTGCAAGTTCAGGGTGGATTGAGTGCCGATCGACAACCG
CGAGGTGCACGAAGCGCAGTGCCGGCGTAACTCGCCGGCCCAACTGCTTT
CGCCGCCGCCGGTGACAGGTGCCCCGCCATCCCCGTTCGATCCCGACGAC
CAGCCTTTCTCCCGAAACGTCTTCACCCCTGCTCAGCCTCCGGCGGCGGA
GGGGGCTGCCCCGACTCCCTCGCAGCCGTGGCGAGAGGTTGACATTCGAG
CGGCAGCCGCCTCCGCTGCCAATAGGACGGCCAGAACTGCGGCGGTAACG
TCGGCGGAAGAGCGGGAGCGGAGGCAGCAGGAGCAGCTGCAGCAACGGCA
ACAGCGCCTGCGGCGGCAGGTGCAGGAGTGGGAGCAGCGCCAGGACTGGG
AGCGATCGTTCACTTCTTCTTCTTCTACCGACGCTTCTTCGGACAGCGGG
TTCGCGTCCGCCGGGCGCGGCGCAGCGGCGGCCGCCGTCGCTACCGGGGC
TCGGGGCGCGTCGTCCACGGAGGGCGAGGGCAAGTCGGGTGAGACTACAA
CAACCTGGGCTTGCGCTGCGTGCACGTACCTGAACGACTTTGGCGTGTCG
CGATGCGACATGTGCGGCACCAGGATGTCCCCCCAGCAGCGCCCACCGGA
CGCCACCTACCGGGACACCCTGATCGGCGGCGGCGGTGGCAGCGGCGGAC
GGCGGCGGAGGCAGGCGGGGGCGGCGGGCGATCTCGAGTCCGCTGCCGAG
GAGGCGCGGTGCAGGATGTTGGCGGCGGAGGCCGCTGCTAGGGACAGAAA
CGGCGTCAGCACTAGCGGCGGCGGGAGCGGGGGCAGAGGGGGCGAGGACG
ACCAGGGCCTTCTCGACGGCCGGACCACCATCTCCGGCGCTGCGGCGGGG
TCCGCCATCGGAGCGATCGGCGGGGCACTGCTCTCGGCGGTGCAGCCCGG
CGCCCGGGCGTCCGGCGTCATGTCCTCCATGTTCCAGGGCGCTCTCATGG
GCGGCATGGCGGGGGCCGCGCTCGGGGGCCTCAGCGATGAGCCCGGAGCA
GGCGGCGGCAGCGGCGGCGGCAGCGGCGGCGGCGGCGGCGCCAGGAGTTC
CGACAACGAGTTTCGAAGGCAACGGCGGAGACAGGTGTCTTCTTTCGAAT
ATGTCCGAGGTCCGACGGCCCGCGTGCGAAGAGGAAGGGACGTGGTCTCG
GAGATGGAGTCTCTGATGCTGGCGCGACGGCTGGAGGCGCTGAGCCTGCC
GGCATCAGCGGCGGCGATGCGGCGTGAAGGGCGCGGGGCGGGGGCGGGAG
CGGAAGCGGGGTCATCGGTATATGAAGGGATTTTGCGACAGCTGGCGGAA
GCGCACAACCACGACGCCGGCGGCGGTGACGCCGGCGGCGGGGGGGGAGC
GAGTCCCGCCTCCGCCCGGGCGATCGCGGCGCTACCGGGGGAGACGCTGA
CGGCCGGCGCGCTCGCGCACCTCAAGGATGACGGGCGGCAGTGCTGCATC
TGTCTCGAGGACTTCGAGGCAGGGGAGAAGGCGACGCGGCTGCCGTGCCT
CCACCTGTACCACACCGCGTGCATCGAAAACTGGCTCCAGACCTCGGGGA
CGTGTCCGCAGTGCAAGTTCAGGGTGGATTGA