mRNA_E-siliculosus-1a_F_contig1030.255.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Homology

BLAST of mRNA_E-siliculosus-1a_F_contig1030.255.1 vs. uniprot
Match: D8LR18_ECTSI (RING-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LR18_ECTSI)

HSP 1 Score: 540 bits (1390), Expect = 4.060e-179
Identity = 410/549 (74.68%), Postives = 416/549 (75.77%), Query Frame = 1

Query:   73 MDATCWMCQRCGHEVPIDNREVHEAQCRRNSPAQLLSPPPVTGAPPSPFDPDDQPFSRNVFTPAQPPAAEGAAPTPSQPWREVDIRAAAASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLRRQVQEWEQRQDWERSFTSSSSTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGETTTTWACAACTYLNDFGVSRCDMCGTRMSPQQRPPDATYRDTLIGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEDDQGLLDGRTTISGAAAGSAIGAIGGALLSAVQPGARASGVMSSMFQGALMGXXAXAALGGLSDEPGAGXXXXXXXXXXXXXRSSDNEFRRQRRR---QVSSFEYVRGPTARVRRGRDVVSEMESLMLARRLEALSLPASAAAMRREGRGAXXXAEAGSSVYEGILRQLAEAHNHDAGGXXXXXXXXASPASARAIAALPGETLTAGALAHLKDDGRQCCICLEDFEAGEKATRLPCLHLYHTACIENWLQTSGTCPQCKFRVD 1710
            MDATCW+CQRCGHEVPIDNREVHEAQCRRNSPAQLLSPPPVTG+PPSPFDPD+QPFSRNVFTPAQPPAAE AA    QP         AASXXXXXXXXXXX                                          ST                                   SG+TTT WACAACTYLNDFGVSRCDMCGTRMSPQQRPPDATYRDTLIG   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX D QGLLDGRTTISGAAAGSAIGAIGGALLSAVQPGARASGVMSSMFQGALMG  A AALGGLSDEPGAGXXXXXXXXXXXXX                QVSSFE+VRGPTARVRRGRDVVSEMESLMLARRLEALSLPASAAAMRREG   XXX    SS+Y GILRQLAEA NHDA G   XXXX  SPASARAIAALPGE LTAGALAHLKDDGRQCCICLEDFEAGEKATRLPCLHLYHT CIENWLQTSGTCPQCKFRVD
Sbjct:    1 MDATCWVCQRCGHEVPIDNREVHEAQCRRNSPAQLLSPPPVTGSPPSPFDPDNQPFSRNVFTPAQPPAAEAAARESGQPCGFAAAGRGAASXXXXXXXXXXX------------------------------------------STEGEGE------------------------------SGDTTT-WACAACTYLNDFGVSRCDMCGTRMSPQQRPPDATYRDTLIGGGVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXD-QGLLDGRTTISGAAAGSAIGAIGGALLSAVQPGARASGVMSSMFQGALMGGMAGAALGGLSDEPGAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQVSSFEFVRGPTARVRRGRDVVSEMESLMLARRLEALSLPASAAAMRREG--GXXXXXXXSSIYAGILRQLAEAQNHDAAGGDAXXXXGTSPASARAIAALPGEALTAGALAHLKDDGRQCCICLEDFEAGEKATRLPCLHLYHTVCIENWLQTSGTCPQCKFRVD 473

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BLAST of mRNA_E-siliculosus-1a_F_contig1030.255.1 vs. uniprot
Match: A0A6H5L176_9PHAE (RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L176_9PHAE)

HSP 1 Score: 477 bits (1227), Expect = 6.490e-153
Identity = 439/638 (68.81%), Postives = 451/638 (70.69%), Query Frame = 1

Query:   73 MDATCWMCQRCGHEVPIDNREVHEAQCRRNSPAQLLSPP-----PVTGAPPSPFDPDDQPFSRNVFTPAQPPAAEGAAPTPSQPWREVDIRAAAASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLRRQVQEWEQRQDWERSFTSSSSTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-------------------------------------------------------------------------------------SGETTTTWACAACTYLNDFGVSRCDMCGTRMSPQQRPPDATYRDTLIGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEDDQGLLDGRTTISGAAAGSAIGAIGGALLSAVQPGARASGVMSSMFQGALMGXXAXAALGGLSDEPGAGXXXXXXXXXXXXXRSSDNE--FRRQRRRQVSSFEYVRGPTARVRRGRDVVSEMESLMLARRLEALSLPASAAAMRREGRGAXXXAEAGSSVYEGILRQLAEAHNHDAGGXXXXXXXXASPASARAIAALPGETLTAGALAHLKDDGRQCCICLEDFEAGEKATRLPCLHLYHTACIENWLQTSGTCPQCKFRVD 1710
            MDAT WMCQRCGHEVPIDNREVHEAQCRRNSPA+LLSP      PVTG+ PSPFDPDD P SRNVFTPAQPPAAE AAPTPSQPWREVDIRAAAASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLRRQVQEWEQRQDWERSFTSSS T         XXXXXXXXXXX XXXXXXXXXXXXXX                                                                                     SGETTTTWACAACTYLNDFGVSRCDMCGTRMSPQQRPPDATYRDTLIGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  EDDQGLLDGR+TISGAAAGSAI           QP                  XX XAALGGLS+EPGAG   XXXXXXXXXX        FRRQ RRQVSS E+VRGPTARVRRGRD VSE+ESLMLAR L+A                              ILR+LAEAHNHDA G XXXXXXXASPASARAIAALPGETLTAG+LAHLKDDGRQCCICLE+FEAGE+ATRLPCLHLYH+ CIENWLQTSGTCPQCKFRVD
Sbjct:    1 MDATYWMCQRCGHEVPIDNREVHEAQCRRNSPARLLSPSAAAARPVTGSLPSPFDPDDLPVSRNVFTPAQPPAAEAAAPTPSQPWREVDIRAAAASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLRRQVQEWEQRQDWERSFTSSSPTDASSDSGFAXXXXXXXXXXXAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGASSTEGEGKSGETTTTWACAACTYLNDFGVSRCDMCGTRMSPQQRPPDATYRDTLIGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--EDDQGLLDGRSTISGAAAGSAIXXXXXXXXXXXQPXXXXXXXXXXXXXXXXXXXXXXAALGGLSNEPGAGGDSXXXXXXXXXXXXXXXXXXFRRQWRRQVSSVEFVRGPTARVRRGRDAVSEVESLMLAR-LDAR-----------------------------ILRRLAEAHNHDAAGGXXXXXXXASPASARAIAALPGETLTAGSLAHLKDDGRQCCICLEEFEAGERATRLPCLHLYHSVCIENWLQTSGTCPQCKFRVD 606

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BLAST of mRNA_E-siliculosus-1a_F_contig1030.255.1 vs. uniprot
Match: A0A0L0FCC5_9EUKA (RING-type domain-containing protein (Fragment) n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0FCC5_9EUKA)

HSP 1 Score: 93.6 bits (231), Expect = 7.900e-19
Identity = 40/69 (57.97%), Postives = 49/69 (71.01%), Query Frame = 1

Query: 1504 IAALPGETLTAGALAHLKDDGRQCCICLEDFEAGEKATRLPCLHLYHTACIENWLQTSGTCPQCKFRVD 1710
            I ALP ETL+  A+A L++  + CCICLEDF+AGEK  RLPCLH YH  CI+ WL   GTCP CK  ++
Sbjct:   54 IHALPTETLSKAAIAKLEEGSQNCCICLEDFKAGEKMKRLPCLHTYHDHCIDEWLSRRGTCPVCKHALE 122

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BLAST of mRNA_E-siliculosus-1a_F_contig1030.255.1 vs. uniprot
Match: A0A8J6CPI3_9ROSI (RING-type domain-containing protein n=1 Tax=Gossypium anomalum TaxID=47600 RepID=A0A8J6CPI3_9ROSI)

HSP 1 Score: 77.8 bits (190), Expect = 5.350e-13
Identity = 32/73 (43.84%), Postives = 46/73 (63.01%), Query Frame = 1

Query: 1483 SPASARAIAALPGETLTAGALAHLKDDGRQCCICLEDFEAGEKATRLPCLHLYHTACIENWLQTSGTCPQCKF 1701
            +PAS  +I A+PG          ++  G+ CCICLE+FE  E+   +PC H++H+ CIE WL+  GTCP C+F
Sbjct:   35 APASKASIEAMPG--------IKVEKSGKDCCICLEEFEVDEEGREMPCKHVFHSGCIEKWLEIHGTCPICRF 99

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BLAST of mRNA_E-siliculosus-1a_F_contig1030.255.1 vs. uniprot
Match: A0A2P6R2V5_ROSCH (Putative aminoacyltransferase, E1 ubiquitin-activating enzyme n=1 Tax=Rosa chinensis TaxID=74649 RepID=A0A2P6R2V5_ROSCH)

HSP 1 Score: 79.3 bits (194), Expect = 6.930e-13
Identity = 40/108 (37.04%), Postives = 59/108 (54.63%), Query Frame = 1

Query: 1384 EAGSSVYEGILRQLAEAHNHDAGGXXXXXXXXASPASARAIAALPGETLTAGALAHLKDDGRQCCICLEDFEAGEKATRLPCLHLYHTACIENWLQTSGTCPQCKFRV 1707
            E+GS   + ++RQLA+  +               PAS  +IAA+P  T+         + GR+C ICL+ FE G +A  +PC HL+H  C+E WL+  GTCP C+F +
Sbjct:   72 ESGSGGIDSLMRQLAKDGH--------------PPASKASIAAMPTVTVA--------ESGRECPICLDQFEVGGEAKEMPCSHLFHGDCVEKWLKVHGTCPVCRFTM 157

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BLAST of mRNA_E-siliculosus-1a_F_contig1030.255.1 vs. uniprot
Match: A0A2P5YC45_GOSBA (RING-type domain-containing protein n=4 Tax=Gossypium TaxID=3633 RepID=A0A2P5YC45_GOSBA)

HSP 1 Score: 77.0 bits (188), Expect = 1.720e-12
Identity = 32/73 (43.84%), Postives = 46/73 (63.01%), Query Frame = 1

Query: 1483 SPASARAIAALPGETLTAGALAHLKDDGRQCCICLEDFEAGEKATRLPCLHLYHTACIENWLQTSGTCPQCKF 1701
            +PAS  +I A+P           +++ G+ CCICLE+FE  E+   +PC HL+H+ CIE WL+  GTCP C+F
Sbjct:   35 TPASKASIKAMPR--------IQVEESGKDCCICLEEFEVDEEGRAMPCKHLFHSGCIEKWLEIHGTCPICRF 99

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BLAST of mRNA_E-siliculosus-1a_F_contig1030.255.1 vs. uniprot
Match: A0A4D9BPB7_SALSN (RING-type domain-containing protein n=1 Tax=Salvia splendens TaxID=180675 RepID=A0A4D9BPB7_SALSN)

HSP 1 Score: 77.0 bits (188), Expect = 3.270e-12
Identity = 35/74 (47.30%), Postives = 47/74 (63.51%), Query Frame = 1

Query: 1486 PASARAIAALPGETLTAGALAHLKDDGRQCCICLEDFEAGEKATRLPCLHLYHTACIENWLQTSGTCPQCKFRV 1707
            PAS  AI A+    +  G     ++ G QC ICLED+EAGEKA R+PC H +H  CIE WL+  G+CP C++ +
Sbjct:   90 PASKAAIDAMETVEVVVGE----EEGGDQCVICLEDWEAGEKAKRMPCKHTFHGECIEKWLKIDGSCPVCRYEM 159

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BLAST of mRNA_E-siliculosus-1a_F_contig1030.255.1 vs. uniprot
Match: A0A1U8I433_GOSHI (E3 ubiquitin-protein ligase RING1-like n=20 Tax=Gossypium TaxID=3633 RepID=A0A1U8I433_GOSHI)

HSP 1 Score: 75.5 bits (184), Expect = 4.510e-12
Identity = 31/72 (43.06%), Postives = 46/72 (63.89%), Query Frame = 1

Query: 1486 PASARAIAALPGETLTAGALAHLKDDGRQCCICLEDFEAGEKATRLPCLHLYHTACIENWLQTSGTCPQCKF 1701
            PAS  +I A+P           +++ G+ CCICLE+FE  E+   +PC H++H++CIE WL+  GTCP C+F
Sbjct:   36 PASKASIEAMPR--------IKVEETGKDCCICLEEFEVDEEGREMPCKHVFHSSCIEKWLEIHGTCPICRF 99

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BLAST of mRNA_E-siliculosus-1a_F_contig1030.255.1 vs. uniprot
Match: A0A5D2F4P4_GOSDA (RING-type domain-containing protein n=1 Tax=Gossypium darwinii TaxID=34276 RepID=A0A5D2F4P4_GOSDA)

HSP 1 Score: 77.0 bits (188), Expect = 4.980e-12
Identity = 32/73 (43.84%), Postives = 46/73 (63.01%), Query Frame = 1

Query: 1483 SPASARAIAALPGETLTAGALAHLKDDGRQCCICLEDFEAGEKATRLPCLHLYHTACIENWLQTSGTCPQCKF 1701
            +PAS  +I A+P           +++ G+ CCICLE+FE  E+   +PC HL+H+ CIE WL+  GTCP C+F
Sbjct:   35 TPASKASIKAMPR--------IQVEESGKDCCICLEEFEVDEEGRAMPCKHLFHSGCIEKWLEIHGTCPICRF 99

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BLAST of mRNA_E-siliculosus-1a_F_contig1030.255.1 vs. uniprot
Match: A0A7S2I4A8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2I4A8_9STRA)

HSP 1 Score: 75.1 bits (183), Expect = 7.650e-12
Identity = 33/76 (43.42%), Postives = 50/76 (65.79%), Query Frame = 1

Query: 1480 ASPASARAIAALPGETLTAGALAHLKDDGRQCCICLEDFEAGEKATRLPCLHLYHTACIENWLQTSGTCPQCKFRV 1707
            A PAS +AI  LP  ++T   L  + ++ R+CCICL++   G++ TRLPC H++H  CI +WL  S TCP C++ +
Sbjct:   61 APPASKKAILQLPTVSVTPEDL--VDENNRECCICLDENNLGDRVTRLPCAHIFHQKCIYDWLLKSCTCPVCRYEL 134

The following BLAST results are available for this feature:

BLAST of mRNA_E-siliculosus-1a_F_contig1030.255.1 vs. uniprot

BLAST of mRNA_E-siliculosus-1a_F_contig1030.255.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25

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Match Name	E-value	Identity	Description
D8LR18_ECTSI	4.060e-179	74.68	RING-type domain-containing protein n=1 Tax=Ectoca...	[more]
A0A6H5L176_9PHAE	6.490e-153	68.81	RING-type domain-containing protein n=1 Tax=Ectoca...	[more]
A0A0L0FCC5_9EUKA	7.900e-19	57.97	RING-type domain-containing protein (Fragment) n=1...	[more]
A0A8J6CPI3_9ROSI	5.350e-13	43.84	RING-type domain-containing protein n=1 Tax=Gossyp...	[more]
A0A2P6R2V5_ROSCH	6.930e-13	37.04	Putative aminoacyltransferase, E1 ubiquitin-activa...	[more]
A0A2P5YC45_GOSBA	1.720e-12	43.84	RING-type domain-containing protein n=4 Tax=Gossyp...	[more]
A0A4D9BPB7_SALSN	3.270e-12	47.30	RING-type domain-containing protein n=1 Tax=Salvia...	[more]
A0A1U8I433_GOSHI	4.510e-12	43.06	E3 ubiquitin-protein ligase RING1-like n=20 Tax=Go...	[more]
A0A5D2F4P4_GOSDA	4.980e-12	43.84	RING-type domain-containing protein n=1 Tax=Gossyp...	[more]
A0A7S2I4A8_9STRA	7.650e-12	43.42	Hypothetical protein (Fragment) n=1 Tax=Helicothec...	[more]

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