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Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1027.234.1 vs. uniprot
Match: A0A6H5JGG7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGG7_9PHAE) HSP 1 Score: 70.9 bits (172), Expect = 2.030e-14 Identity = 32/36 (88.89%), Postives = 32/36 (88.89%), Query Frame = 0 Query: 35 MCGAMTVYVLLFCLSHLAADTMTVASWECTIIKLGD 70
MCGAM VYVLLFC SHLAADT TV SWECTIIKLGD
Sbjct: 1 MCGAMAVYVLLFCFSHLAADTSTVGSWECTIIKLGD 36
BLAST of mRNA_E-siliculosus-1a_F_contig1027.234.1 vs. uniprot
Match: A0A6H5JSA2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSA2_9PHAE) HSP 1 Score: 58.2 bits (139), Expect = 1.170e-9 Identity = 28/36 (77.78%), Postives = 28/36 (77.78%), Query Frame = 0 Query: 34 GMCGAMTVYVLLFCLSHLAADTMTVASWECTIIKLG 69
G CGAM VY LLFCLSHLAADT WECTIIKLG
Sbjct: 16 GTCGAMAVYALLFCLSHLAADT-----WECTIIKLG 46
BLAST of mRNA_E-siliculosus-1a_F_contig1027.234.1 vs. uniprot
Match: A0A6H5JZV7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZV7_9PHAE) HSP 1 Score: 57.4 bits (137), Expect = 1.340e-9 Identity = 26/28 (92.86%), Postives = 26/28 (92.86%), Query Frame = 0 Query: 40 TVYVLLFCLSHLAADTMTVASWECTIIK 67
TVYVLLFCLSHLAADTMTV SWECTII
Sbjct: 7 TVYVLLFCLSHLAADTMTVGSWECTIIN 34
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1027.234.1 vs. uniprot
Analysis Date: 2022-09-16 ( Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 3
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 30..52 |
| None | No IPR available | PHOBIUS | CYTOPLASMIC_DOMAIN | Cytoplasmic domain | coord: 1..29 |
| None | No IPR available | PHOBIUS | NON_CYTOPLASMIC_DOMAIN | Non cytoplasmic domain | coord: 53..70 |
| None | No IPR available | TMHMM | TMhelix | | coord: 30..52 |
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_E-siliculosus-1a_F_contig1027.234.1 ID=prot_E-siliculosus-1a_F_contig1027.234.1|Name=mRNA_E-siliculosus-1a_F_contig1027.234.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=70bp
QPGITTAADTGFVDVRVHLKKSQENLRAGLGSLGMCGAMTVYVLLFCLSH
LAADTMTVASWECTIIKLGD back to top
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