mRNA_E-siliculosus-1a_F_contig10244.218.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Properties


Property Name	Value
Start	0
Stop	0
Cds size	318
Model size	320
Exons	3
Hectar predicted targeting category	signal anchor

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at E-siliculosus-1a_F_contig10244:540..1440-
coding sequence from alignment at E-siliculosus-1a_F_contig10244:540..1440-

protein sequence of mRNA_E-siliculosus-1a_F_contig10244.218.1

>prot_E-siliculosus-1a_F_contig10244.218.1 ID=prot_E-siliculosus-1a_F_contig10244.218.1|Name=mRNA_E-siliculosus-1a_F_contig10244.218.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=106bp
CYLRCCNRLCFSEMDRNQWVPDPNRTKQILLLARLPLLLPLPLPLALLHP
LLQLPLLLTLLQLPTPRWIETSGYPIQVAPNSKMKKPGGIGSSFRPKSGR
RKRPMP

mRNA from alignment at E-siliculosus-1a_F_contig10244:540..1440-

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_E-siliculosus-1a_F_contig10244.218.1 ID=mRNA_E-siliculosus-1a_F_contig10244.218.1|Name=mRNA_E-siliculosus-1a_F_contig10244.218.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=901bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig10244:540..1440- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
TGTTATCTGCGCTGCTGTAATCGGCTGTGCTTCAGCGAGATGGATCGAAA
CCAGTGGGTACCCGATCCAAATCGCACCAAACAGGTGCGGCTACGTCGAT
ACTACACTGGTTTCCAGGGCACGCAGTAGTAATGCCAAGGCTGGTCAAGG
AGGATACAATGAGACAGCAGCCTTACTTTGGCAGGCTAGGTTCTTCATTC
ACATACAAGGCTTGGTAAACAAATCAGCGACGTGGACGCGAATTGGGCGT
GCACACAGTTGCGCAGCGTTTCGGAATGACCATTCTCATCACTCCTGTCG
CGCCTCATGTCTGTAGTTGCAGTCGCGCTGCTAAACATGAAGTACAAAAC
CGTCGAAACTAATTTGAGATGCTTTTCTGCCGTTTTCTACCGCTTCCCGC
CGCTGGCACGGCTCGTGTCGCAGATACTGCTATTGGCACGGCTGCCACTG
CTGCTACCGCTACCGCTTCCTCTGGCGCTCCTGCACCCGCTGCTACAGCT
ACCCCTGCTACTGACACTGCTACAACTACCGACGCCGAGATGGATCGAAA
CCAGTGGGTACCCGATCCAAGTCGCACCCAACAGGTGTGGCTATGTCGAT
CGATACTACACATAGTTTGCAGGGCACGCAGCAGTAGTACCAGGGCTGGT
CATGGAGGGTACAGAGAGACAGCAGCCTTACTATTACGTGGCTAGGTTCT
TCGCGCGTATACAAGGCTAGGTAAACCAAATCAACGACGTAGACGCGAAT
TGGGCGTGCACGCGTTTGCGCAGCGTTTCGGAATGACCACTCGTATCACT
CCTGTCGTGCCTCATGTCTACAAAACAGCAAAATGAAAAAACCCGGAGGT
ATTGGATCAAGCTTCAGGCCAAAAAGCGGAAGAAGAAAGCGGCCTATGCC
G

Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig10244:540..1440-

>mRNA_E-siliculosus-1a_F_contig10244.218.1 ID=mRNA_E-siliculosus-1a_F_contig10244.218.1|Name=mRNA_E-siliculosus-1a_F_contig10244.218.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=636bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig10244:540..1440- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
TGTTATCTGCGCTGCTGTAATCGGCTGTGCTTCAGCGAGATGGATCGAAA
CCAGTGGGTACCCGATCCAAATCGCACCAAACAGTGTTATCTGCGCTGCT
GTAATCGGCTGTGCTTCAGCGAGATGGATCGAAACCAGTGGGTACCCGAT
CCAAATCGCACCAAACAGATACTGCTATTGGCACGGCTGCCACTGCTGCT
ACCGCTACCGCTTCCTCTGGCGCTCCTGCACCCGCTGCTACAGCTACCCC
TGCTACTGACACTGCTACAACTACCGACGCCGAGATGGATCGAAACCAGT
GGGTACCCGATCCAAGTCGCACCCAACAGATACTGCTATTGGCACGGCTG
CCACTGCTGCTACCGCTACCGCTTCCTCTGGCGCTCCTGCACCCGCTGCT
ACAGCTACCCCTGCTACTGACACTGCTACAACTACCGACGCCGAGATGGA
TCGAAACCAGTGGGTACCCGATCCAAGTCGCACCCAACAGCAAAATGAAA
AAACCCGGAGGTATTGGATCAAGCTTCAGGCCAAAAAGCGGAAGAAGAAA
GCGGCCTATGCCGCAAAATGAAAAAACCCGGAGGTATTGGATCAAGCTTC
AGGCCAAAAAGCGGAAGAAGAAAGCGGCCTATGCCG

mRNA_E-siliculosus-1a_F_contig10244.218.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female

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