prot_E-siliculosus-1a_F_contig10212.200.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig10212.200.1
Unique Nameprot_E-siliculosus-1a_F_contig10212.200.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length57
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig10212.200.1 vs. uniprot
Match: D7FX56_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX56_ECTSI)

HSP 1 Score: 104 bits (259), Expect = 1.080e-24
Identity = 53/57 (92.98%), Postives = 55/57 (96.49%), Query Frame = 0
Query:    1 MIYNPVVDKRTVTMHLPPSYRLALEMLEELASSSRRRAEQRTRGITRADLEEKWQAK 57
            MIY+PV DKRTVTMHLPPSYRLALEMLEELASSSRR+AEQRTRGITRADLEEKW AK
Sbjct:  648 MIYDPVDDKRTVTMHLPPSYRLALEMLEELASSSRRKAEQRTRGITRADLEEKWHAK 704          
BLAST of mRNA_E-siliculosus-1a_F_contig10212.200.1 vs. uniprot
Match: D7FX69_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX69_ECTSI)

HSP 1 Score: 104 bits (259), Expect = 1.080e-24
Identity = 53/57 (92.98%), Postives = 55/57 (96.49%), Query Frame = 0
Query:    1 MIYNPVVDKRTVTMHLPPSYRLALEMLEELASSSRRRAEQRTRGITRADLEEKWQAK 57
            MIY+PV DKRTVTMHLPPSYRLALEMLEELASSSRR+AEQRTRGITRADLEEKW AK
Sbjct:  741 MIYDPVDDKRTVTMHLPPSYRLALEMLEELASSSRRKAEQRTRGITRADLEEKWHAK 797          
BLAST of mRNA_E-siliculosus-1a_F_contig10212.200.1 vs. uniprot
Match: A0A6H5KZA7_9PHAE (G domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZA7_9PHAE)

HSP 1 Score: 97.1 bits (240), Expect = 3.950e-22
Identity = 47/57 (82.46%), Postives = 54/57 (94.74%), Query Frame = 0
Query:    1 MIYNPVVDKRTVTMHLPPSYRLALEMLEELASSSRRRAEQRTRGITRADLEEKWQAK 57
            +I+NPV DKR VTMH+PP Y++ALEMLEELASSSRR+AEQRTRGITRADLE+KWQAK
Sbjct:  300 IIFNPVDDKRAVTMHIPPGYQVALEMLEELASSSRRKAEQRTRGITRADLEQKWQAK 356          
BLAST of mRNA_E-siliculosus-1a_F_contig10212.200.1 vs. uniprot
Match: D7FJV1_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJV1_ECTSI)

HSP 1 Score: 79.0 bits (193), Expect = 9.180e-16
Identity = 42/57 (73.68%), Postives = 46/57 (80.70%), Query Frame = 0
Query:    1 MIYNPVVDKRTVTMHLPPSYRLALEMLEELASSSRRRAEQRTRGITRADLEEKWQAK 57
            +IY+   D R VTM LP SYRLALEMLEELAS SR + EQ+TRGITRA LEEKWQAK
Sbjct:  577 IIYDSTDDTRVVTMRLPESYRLALEMLEELASCSRSKTEQQTRGITRAILEEKWQAK 633          
BLAST of mRNA_E-siliculosus-1a_F_contig10212.200.1 vs. uniprot
Match: A0A6H5JSC0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSC0_9PHAE)

HSP 1 Score: 72.0 bits (175), Expect = 2.520e-13
Identity = 37/55 (67.27%), Postives = 41/55 (74.55%), Query Frame = 0
Query:    3 YNPVVDKRTVTMHLPPSYRLALEMLEELASSSRRRAEQRTRGITRADLEEKWQAK 57
            YN     R VTMHLP SYRLAL+MLEELAS SR + EQ  RG+TRA LE+KWQ K
Sbjct:  289 YNSASRTRAVTMHLPESYRLALKMLEELASCSRSKTEQHIRGVTRAILEDKWQTK 343          
BLAST of mRNA_E-siliculosus-1a_F_contig10212.200.1 vs. uniprot
Match: A0A6H5KM38_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KM38_9PHAE)

HSP 1 Score: 66.2 bits (160), Expect = 1.170e-11
Identity = 32/35 (91.43%), Postives = 33/35 (94.29%), Query Frame = 0
Query:    1 MIYNPVVDKRTVTMHLPPSYRLALEMLEELASSSR 35
            MIYNPV DKRTVTMHLPPSY +ALEMLEELASSSR
Sbjct:  208 MIYNPVDDKRTVTMHLPPSYHVALEMLEELASSSR 242          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig10212.200.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D7FX56_ECTSI1.080e-2492.98LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus s... [more]
D7FX69_ECTSI1.080e-2492.98LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus s... [more]
A0A6H5KZA7_9PHAE3.950e-2282.46G domain-containing protein n=1 Tax=Ectocarpus sp.... [more]
D7FJV1_ECTSI9.180e-1673.68LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus s... [more]
A0A6H5JSC0_9PHAE2.520e-1367.27Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KM38_9PHAE1.170e-1191.43Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig10212contigE-siliculosus-1a_F_contig10212:1436..1903 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig10212.200.1mRNA_E-siliculosus-1a_F_contig10212.200.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig10212 1436..1903 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig10212.200.1 ID=prot_E-siliculosus-1a_F_contig10212.200.1|Name=mRNA_E-siliculosus-1a_F_contig10212.200.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=57bp
MIYNPVVDKRTVTMHLPPSYRLALEMLEELASSSRRRAEQRTRGITRADL
EEKWQAK
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