Homology
BLAST of mRNA_E-siliculosus-1a_F_contig102.191.1 vs. uniprot
Match:
A0A6H5K9A7_9PHAE (Protein N-terminal glutamine amidohydrolase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9A7_9PHAE)
HSP 1 Score: 450 bits (1157), Expect = 2.550e-159
Identity = 222/237 (93.67%), Postives = 224/237 (94.51%), Query Frame = 1
Query: 40 MGPCGNKGWEGGGPSDGAARAASSAEGAPTPRSAR-PVLECTRADCRWYTSHYCEENSLRLCNHLLGRAESDGVQLSVVFVSNAARQVPVWFQRLADRRDEPVLWDYHVILLAQHPHGNWVYDLDSTLDFPSPASLYMTQAFRKQMNIDQLYRQMFRVVAARECVDHFSSDRSHMIEAGGGYSAQPPGFPPLRRGPRATSSNNMNEWINMDATTGRGRVLNLEDMEAFVARGPHRFT 747
MGPCGNK WEGGGPSDGAARA SSAE APTP SAR PVLECTRADCRWYTSHYCEENSLRLCNHLLGRAES GVQLSVVFVSNAARQVPVWFQRLADRRDEPVLWDYHVILLAQHPHGNWVYDLDSTLDFPSPASLYMTQAFRK MNIDQ YRQMFRVV ARECVDHFSSDRSHM+E GGGYSA PPGFPPLR GPRATSSNNMNEWINMDATTGRGRVLNLE+ME FVARGPHRFT
Sbjct: 1 MGPCGNKDWEGGGPSDGAARAVSSAEVAPTPPSARRPVLECTRADCRWYTSHYCEENSLRLCNHLLGRAESAGVQLSVVFVSNAARQVPVWFQRLADRRDEPVLWDYHVILLAQHPHGNWVYDLDSTLDFPSPASLYMTQAFRKLMNIDQQYRQMFRVVPARECVDHFSSDRSHMMEEGGGYSALPPGFPPLR-GPRATSSNNMNEWINMDATTGRGRVLNLEEMETFVARGPHRFT 236
BLAST of mRNA_E-siliculosus-1a_F_contig102.191.1 vs. uniprot
Match:
D7G8M5_ECTSI (Protein N-terminal glutamine amidohydrolase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8M5_ECTSI)
HSP 1 Score: 218 bits (555), Expect = 1.760e-69
Identity = 105/107 (98.13%), Postives = 105/107 (98.13%), Query Frame = 1
Query: 40 MGPCGNKGWEGGGPSDGAARAASSAEGAPTPRSARPVLECTRADCRWYTSHYCEENSLRLCNHLLGRAESDGVQLSVVFVSNAARQVPVWFQRLADRRDEPVLWDYH 360
MGPCGNKGWEGGGPSDGAARAASSAE APTP SARPVLECTRADCRWYTSHYCEENSLRLCNHLLGRAESDGVQLSVVFVSNAARQVPVWFQRLADRRDEPVLWDYH
Sbjct: 1 MGPCGNKGWEGGGPSDGAARAASSAEVAPTPPSARPVLECTRADCRWYTSHYCEENSLRLCNHLLGRAESDGVQLSVVFVSNAARQVPVWFQRLADRRDEPVLWDYH 107
BLAST of mRNA_E-siliculosus-1a_F_contig102.191.1 vs. uniprot
Match:
D7G894_ECTSI (Protein N-terminal glutamine amidohydrolase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G894_ECTSI)
HSP 1 Score: 181 bits (460), Expect = 2.060e-55
Identity = 89/92 (96.74%), Postives = 89/92 (96.74%), Query Frame = 1
Query: 472 MNIDQLYRQMFRVVAARECVDHFSSDRSHMIEAGGGYSAQPPGFPPLRRGPRATSSNNMNEWINMDATTGRGRVLNLEDMEAFVARGPHRFT 747
MNIDQ YRQMFRVVAARECVDHFSSDRSHMIEAGG YSAQPPGFPPLR GPRATSSNNMNEWINMDATTGRGRVLNLEDMEAFVARGPHRFT
Sbjct: 1 MNIDQQYRQMFRVVAARECVDHFSSDRSHMIEAGGAYSAQPPGFPPLR-GPRATSSNNMNEWINMDATTGRGRVLNLEDMEAFVARGPHRFT 91
BLAST of mRNA_E-siliculosus-1a_F_contig102.191.1 vs. uniprot
Match:
UPI001AAC8754 (protein N-terminal glutamine amidohydrolase isoform X1 n=3 Tax=Rana temporaria TaxID=8407 RepID=UPI001AAC8754)
HSP 1 Score: 146 bits (369), Expect = 3.250e-40
Identity = 83/195 (42.56%), Postives = 115/195 (58.97%), Query Frame = 1
Query: 127 TPRSARPVLECTRADCRWYTSHYCEENSLRLCNHLLGRAESDGVQLSVVFVSNAARQVPVWFQRLADRRDEPVLWDYHVILLAQHPHGN-WVYDLDSTLDFPSPASLYMTQAFRKQMNIDQLYRQMFRVVAARECVDHFSSDRSHMIEAGGGYSAQPPGFPPLRRGPRATSSNNMNEWINMDATTGRGRVLNLED 708
TP S L R DC YTS YCEEN +LC ++ R+E ++ VF+SN R +P+W Q+ RRDEPV+WDYHVILL G +YDLDS L FP P LY+ +A R NI + +R+ R++ A E + F+SDRSHM +A + PP +P + SS N++++I+MD G G+V LE+
Sbjct: 2 TPSSQDRDLLPPRTDCP-YTSCYCEENVWKLCEYVRDRSERPLQEIYAVFLSNEKRMIPIWKQQCG-RRDEPVIWDYHVILLHVCSGGQRLIYDLDSVLPFPCPCELYVKEALRSDQNIRKDFRRKLRLIRADEFLRTFASDRSHMKDADNKWKKPPPPYPCIHT---EESSMNLDDFISMDPAVGYGKVYTLEE 191
BLAST of mRNA_E-siliculosus-1a_F_contig102.191.1 vs. uniprot
Match:
A0A6P7K340_9TELE (Protein N-terminal glutamine amidohydrolase n=1 Tax=Parambassis ranga TaxID=210632 RepID=A0A6P7K340_9TELE)
HSP 1 Score: 147 bits (370), Expect = 3.750e-40
Identity = 81/183 (44.26%), Postives = 110/183 (60.11%), Query Frame = 1
Query: 160 TRADCRWYTSHYCEENSLRLCNHLLGRAESDGVQLSVVFVSNAARQVPVWFQRLADRRDEPVLWDYHVILL-AQHPHGNWVYDLDSTLDFPSPASLYMTQAFRKQMNIDQLYRQMFRVVAARECVDHFSSDRSHMIEAGGGYSAQPPGFPPLRRGPRATSSNNMNEWINMDATTGRGRVLNLE 705
+R +C YTS YCEEN +LC + + QL VVF+SN R VP+W Q+ + RRD+PV+WDYHVILL A+HP +YDLDS L FP LY QAFR NI Y + RVV A + +F++DRSHM + G + PP +PP+ A N++++I+MD G G V +L+
Sbjct: 10 SRENCA-YTSCYCEENVWKLCEFIRAERAAALEQLFVVFISNQNRTVPLWKQK-SGRRDQPVIWDYHVILLQARHPSDALIYDLDSELSFPCTLKLYADQAFRSDCNIRPEYHRKLRVVPANSFLLNFATDRSHMRNSDGSWKMPPPPYPPMNT---AECQMNLDDFISMDPAVGWGVVFSLD 187
BLAST of mRNA_E-siliculosus-1a_F_contig102.191.1 vs. uniprot
Match:
A0A819ISL8_9BILA (Protein N-terminal glutamine amidohydrolase n=4 Tax=Rotaria sordida TaxID=392033 RepID=A0A819ISL8_9BILA)
HSP 1 Score: 145 bits (365), Expect = 1.060e-39
Identity = 76/182 (41.76%), Postives = 110/182 (60.44%), Query Frame = 1
Query: 181 YTSHYCEENSLRLCNHLLGRAESDGVQLSVVFVSNAARQVPVWFQRLADRRDEPVLWDYHVILLAQHPHGNWVYDLDSTLDFPSPASLYMTQAFRKQMNIDQLYRQMFRVVAARECVDHFSSDRSHMIEAGG-GYSAQPPGFPPLRRGPRATSSNNMNEWINMDATTGRGRVLNLEDMEAFV 723
YTS YCEEN +LC + L VF+SN RQ+P+W Q+ A + +WDYHVIL+ + + +YD DSTL FP A+ Y+ A R ++NI Y +MFRV+ A++ +D F+SDRSHM++ Y A PP +PP+ S+NN+NE+I+M++ G G V+NL D F+
Sbjct: 13 YTSCYCEENIWKLCECWKQNNPNHLNSLYAVFISNKRRQIPIWEQKSASNSEHLAIWDYHVILVDKSSSPSVIYDFDSTLPFPVSATNYIQLAIRDEINIVHRYHRMFRVIPAQQYLDVFASDRSHMLKEDKITYIASPPSYPPICN---QKSTNNINEFIDMESKNGPGIVMNLTDFRRFL 191
BLAST of mRNA_E-siliculosus-1a_F_contig102.191.1 vs. uniprot
Match:
UPI001BD6D019 (protein N-terminal glutamine amidohydrolase n=1 Tax=Cheilinus undulatus TaxID=241271 RepID=UPI001BD6D019)
HSP 1 Score: 144 bits (363), Expect = 2.730e-39
Identity = 79/184 (42.93%), Postives = 110/184 (59.78%), Query Frame = 1
Query: 181 YTSHYCEENSLRLCNHLLGRAESDGVQLSVVFVSNAARQVPVWFQRLADRRDEPVLWDYHVILLAQHPH-GNWVYDLDSTLDFPSPASLYMTQAFRKQMNIDQLYRQMFRVVAARECVDHFSSDRSHMIEAGGGYSAQPPGFPPLRRGPRATSSNNMNEWINMDATTGRGRVLNLEDMEAFVAR 729
YTS YCEEN +LC ++ + +L VVF+SN R VP+W Q+ + R D+PV+WDYHVILL P G +YDLDS L FP LY++QA R +++ Y + RVV A + +F+ DRSHM G + PP +PP+ A S N++++I+MD G G VL+L+D FV R
Sbjct: 16 YTSCYCEENVWKLCEYVRTEGTAPLQELFVVFISNENRMVPLWKQK-SGRGDQPVIWDYHVILLQVRPQSGALIYDLDSELSFPCSLRLYVSQALRSDRHVNPAYHRKLRVVPADSFLSNFACDRSHMKNTDGSWRMPPPPYPPIHT---AESHMNLDDFISMDPQVGWGAVLSLDD---FVKR 192
BLAST of mRNA_E-siliculosus-1a_F_contig102.191.1 vs. uniprot
Match:
A0A6P3VJN1_CLUHA (Protein N-terminal glutamine amidohydrolase n=1 Tax=Clupea harengus TaxID=7950 RepID=A0A6P3VJN1_CLUHA)
HSP 1 Score: 144 bits (362), Expect = 6.790e-39
Identity = 80/196 (40.82%), Postives = 117/196 (59.69%), Query Frame = 1
Query: 148 VLECTRADCRWYTSHYCEENSLRLCNHLLGRAESDGVQLSVVFVSNAARQVPVWFQRLADRRDEPVLWDYHVILLAQHPHGNWVYDLDSTLDFPSPASLYMTQAFRKQMNIDQLYRQMFRVVAARECVDHFSSDRSHMIEAGGGYSAQPPGFPPLRRGPRATSSNNMNEWINMDATTGRGRVLNL-EDMEAFVARG 732
++ ++ DC YTS YCEEN +LC ++ + + + VF+SN R VP+W Q+ RRD+PV+WDYHVILL ++VYDLD+TL FP P SLY +AFR + + Y + RV+ A + F+SDRSHM + G + PP +P L A S N++ +I+MDA G G+V +L E ++ F +G
Sbjct: 12 IITPSKEDCV-YTSCYCEENIWKLCEYIKAQPQHCIQDVYAVFISNERRMVPLWKQKSC-RRDQPVVWDYHVILLHTGNRESYVYDLDTTLPFPCPLSLYEKEAFRSDHGLKESYWRKLRVIPAETFLSSFASDRSHMKDEVGHWRMLPPSYPCLET---AESKMNLDSFISMDAQIGWGKVYSLAEFVQHFGGKG 202
BLAST of mRNA_E-siliculosus-1a_F_contig102.191.1 vs. uniprot
Match:
UPI0020153C49 (protein N-terminal glutamine amidohydrolase isoform X1 n=3 Tax=Alosa TaxID=34772 RepID=UPI0020153C49)
HSP 1 Score: 142 bits (358), Expect = 2.090e-38
Identity = 79/197 (40.10%), Postives = 115/197 (58.38%), Query Frame = 1
Query: 148 VLECTRADCRWYTSHYCEENSLRLCNHLLGRAESDGVQLSVVFVSNAARQVPVWFQRLADRRDEPVLWDYHVILLAQHPHG-NWVYDLDSTLDFPSPASLYMTQAFRKQMNIDQLYRQMFRVVAARECVDHFSSDRSHMIEAGGGYSAQPPGFPPLRRGPRATSSNNMNEWINMDATTGRGRVLNLED-MEAFVARG 732
++ R +C YTS YCEEN +LC H+ + + + VF+SN R VP+W Q+ + D+PV+WDYHVILL G +++YDLD+ L +P P SLY +AFR + + YR+ RV+ A + F+SDRSHM + G + PP +P + A S N+N +I+MDA G G+V +L + ME F G
Sbjct: 12 IITPPREECV-YTSCYCEENIWKLCEHIKAQHQHCIQDVYAVFISNERRMVPIWKQK-SSHGDQPVVWDYHVILLHNWNSGESYIYDLDTVLPYPCPLSLYEKEAFRSDHYLKESYRRKLRVIPAETFLSSFASDRSHMKDEVGHWKMLPPSYPCIET---AESKMNLNYFISMDAQVGWGKVYSLSEFMEHFGGEG 203
BLAST of mRNA_E-siliculosus-1a_F_contig102.191.1 vs. uniprot
Match:
A0A310SUL1_XENTR (Protein N-terminal glutamine amidohydrolase n=1 Tax=Xenopus tropicalis TaxID=8364 RepID=A0A310SUL1_XENTR)
HSP 1 Score: 142 bits (357), Expect = 2.100e-38
Identity = 76/189 (40.21%), Postives = 116/189 (61.38%), Query Frame = 1
Query: 145 PVLECTRADCRWYTSHYCEENSLRLCNHLLGRAESDGVQLSVVFVSNAARQVPVWFQRLADRRDEPVLWDYHVILLAQHPH-GNWVYDLDSTLDFPSPASLYMTQAFRKQMNIDQLYRQMFRVVAARECVDHFSSDRSHMIEAGGGYSAQPPGFPPLRRGPRATSSNNMNEWINMDATTGRGRVLNLED 708
P L R+DC YT YCEEN +LC ++ + D + S VF+SN + +P+W Q+ A + D PV+WDYHVILL + GN+VYDLD+TL FPS + Y+ +A + NI +++ RVV ARE + F+SDRSHM ++ ++ PP +P ++ A S+ N+ ++I+M+ G G V +L +
Sbjct: 8 PSLLPGRSDCH-YTGCYCEENVWKLCEYIRDQRPCDLDEFSAVFISNENKMIPIWKQKSA-KGDGPVIWDYHVILLRESARDGNFVYDLDTTLAFPSSCNAYIREALKSDTNIHCDFKRKLRVVGAREFLQTFASDRSHMRDSSSNWTKPPPPYPCIQT---AESTMNLGDFISMNPEVGWGTVYSLAE 191
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig102.191.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90 )
Total hits: 25
0 1 Expect = 2.55e-159 / Id = 93.67 Expect = 1.76e-69 / Id = 98.13 Expect = 2.06e-55 / Id = 96.74 Expect = 3.25e-40 / Id = 42.56 Expect = 3.75e-40 / Id = 44.26 Expect = 1.06e-39 / Id = 41.76 Expect = 2.73e-39 / Id = 42.93 Expect = 6.79e-39 / Id = 40.82 Expect = 2.09e-38 / Id = 40.10 Expect = 2.10e-38 / Id = 40.21 Sequence A0A6H5K9A7_9PHAE D7G8M5_ECTSI D7G894_ECTSI UPI001AAC8754 A0A6P7K340_9TELE A0A819ISL8_9BILA UPI001BD6D019 A0A6P3VJN1_CLUHA UPI0020153C49 A0A310SUL1_XENTR Pages
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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name Value
Start 0 Stop 1 Cds size 750 Model size 752 Exons 5 Hectar predicted targeting category other localisation BRITE ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029 Best eggNOG OG NA|NA|NA Best tax level Eukaryota COG Functional cat. S EC 3.5.1.122,6.1.1.1 Ec32 ortholog Ec-00_010770.1 Ec32 ortholog description Protein N-terminal glutamine amidohydrolase, alpha beta roll EggNOG OGs KOG3261@1,KOG3261@2759 EggNOG free text desc. hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides GOs GO:0003008,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005829,GO:0006464,GO:0006807,GO:0007610,GO:0007611,GO:0007612,GO:0007635,GO:0008150,GO:0008152,GO:0008306,GO:0008355,GO:0009056,GO:0009057,GO:0009987,GO:0016787,GO:0016810,GO:0016811,GO:0019538,GO:0030163,GO:0032501,GO:0036211,GO:0042048,GO:0042221,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0050877,GO:0050890,GO:0050896,GO:0070773,GO:0071704,GO:1901564,GO:1901565,GO:1901575 KEGG Module M00359,M00360 KEGG Pathway ko00970,map00970 KEGG Reaction R02918,R11560 KEGG ko ko:K01866,ko:K21286 KEGG rclass RC00010,RC00055,RC00523 Preferred name WDYHV1 Seed eggNOG ortholog 2880.D7G8M5 Seed ortholog evalue 5.9e-55 Seed ortholog score 221.1 Taxonomic scope Eukaryota
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig102.191.1
>prot_E-siliculosus-1a_F_contig102.191.1 ID=prot_E-siliculosus-1a_F_contig102.191.1|Name=mRNA_E-siliculosus-1a_F_contig102.191.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=250bp
LPRWRLSLGARWLMGPCGNKGWEGGGPSDGAARAASSAEGAPTPRSARPV back to top mRNA from alignment at E-siliculosus-1a_F_contig102:80131..85573-
Legend: polypeptide CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_F_contig102.191.1 ID=mRNA_E-siliculosus-1a_F_contig102.191.1|Name=mRNA_E-siliculosus-1a_F_contig102.191.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=5443bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig102:80131..85573- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)CTCCCCCGCTGGCGTCTATCGCTTGGGGCTCGCTGGCTCATGGGGCCATG
CGGAAACAAAGGCTGGGAAGGCGGTGGGCCTTCTGATGGCGCGGCTCGAG
CTGCGAGTTCCGCCGAAGGGGCGCCTACGCCGCGCTCAGCAAGACCGGTG
CTG GTGAGAAAGAGGTTGTCGAAACTCCCAAGATATGTGCGGAGCCTGCG
TGTGTATTGTGGTTTTGTACAAGGCGGTTCGTTTGGTCCTTGTCTGATGC
CGCGTGCGGAATCGCACCGACTCGTGGCCACTGGTGAGGACGGCTCGGTG
TTCGAAAGAGAGACGATAGCGAGGCAAAAAACGGCAGCAGTGGCTTGATT
CCCCTGCTTCCAACATCCTTGTGTGTCCGGGTTGTGTGCTGATCACGCAT
GTTGCGCTTCTGACGCAACGCGCTCGCAACACCAAAGTCCCCGGTCTTGG
TAGCATACTGGAGAAGACACCACCTGCATGAGAACCGGAGGTGTAGATAC
GTGATAGGATCCACCTCTCCTTTCGAGCGTGTAAGACACTGGGGGAGGAT
GGCTGCAGTATGGAGAGGAGCGAGCGGGAAGTCGGTACACAGACAGCGCG
TAGCTTTCTCACCGGACGTGCTGGTGTGTGTGTTTCGTACTAAACTTTTC
GTAGATTTCGTACCGTATTTCGTAGAGGTGCAGGTACGTAAGCAAGACAG
AGATTCGATATTGTACCGTTGTGGATCAGGTCTCGCCCCAACATGTTTAT
CAACATATGACCGAGCTCGCCGCTCGTGGACCCATCGTAGACCGCACACC
ACTACAATCTCCACACGCCTGCCGCGGAGCCCTCTCAAGACACAGTGAAG
TGAGACCGAGCACTGCTGTTTCTGTTCGCTCTGCGGCCCGAACGATTCTT
GTCTCTCCCTCTTGGTTGGCTGGTTTCTCTCACCAGAGCAACAAGCGAGC
GAGCGTGCCTGCTGCTGCTGTAGATCCATCTGGGAAACCACCCCTCCAAC
CCTTTCCCTCCCTCCCTCCCTCTGCCTCTCTATCTTTCTCTTCCTCTATG
TGGTCTCGACGCACGTGTTCATGATGATGAATAACACGGTCCGTGCTGCT
GCTGTTTGCCCCTCATTTAATTTCCAGGAATGCACCCGGGCAGACTGCCG
CTGGTACACATCCCACTACTGCGAGGAAAACTCTCTGCGCCTGTGTAACC
ACCTCCTCGGCAGGGCCGAGTCTGACGGTGTACAGCTCTCCGTCGTCTTC
GTGTCAAACGCGGCCCGCCAAGTGCCGGTGTGGTTCCAGCGTCTTGCCGA
CAGACGTGACGAGCCAGTTCTGTGGGATTACCACG GTAGGTAACAACCCT
TCTTGTGCGCTGTGAAGAGCCCTCTGTTTATCGTATGAATCAACCGCCAA
ACAATAAAGTCACACAGCAGGCGAGTTCCGTCTTCGTCTATCCCGGGATC
TTATGTACTTGTTGTCGGCCTCTGAGATTCCATGGATTACTGTCGACAGC
GTGCCCAAACTGCAGTGGAGACAGTTAGTGGCGCTGAAAAACAACTCAGT
GATATGTGTACCGGTCTGTACTTCAATAGAACATGCATAAAAACGCATAC
ACAACACATGATGACCAAAACTGGTGTTTTCTGAGGTGGCACGCAGCGCT
GGCCGTTGGACTGAGACAAGTTGGAGACTGCACAGCGGTTCGTCTCCGTC
TTCGAAGTGGGTAACTTTGCTTGTCGAGACCCCTCTACACCTCCTTTGTA
CAAGGAATTACTCTCGGACTTTGCCATCCTGTCCCTCTCTGTCGTGTTTC
TGGTGCTTTTGTCTCCGCTGTTGCGTCGGCATGCATGCTGCTGTCGAGAT
CTACTTGTGCTGTAGTACGCACGTGTTTGTATTGTAGGTATTGACATGCA
GGTAGATCTTGTATCCGCGGAGAAGCTATCATATATAGGCTCGTCATTTT
TCTCGTCTGATTTTCTGAGGTGGCACTCTGTGCGTTCACTGGAGAGGAGA
AACAGAGCCCATTTTTTGGTCTTCGTATTTACACAGTGTATATGGGTAGC
GAATTGTTGGTGCCCTCAACAACTGCTGTACGCCCCCAGATAGGTATGTA
CTGCTTTACAACTCAGCAGCAGCAGCAGCAGCAGCAGCACGAGATTACTG
TAGTTATTCACCGACTGCAGTACTAGGGGGTATTGGGCAGCCGCGGAGTA
CGACTCAACCACTACCGGCAATAGGCTATCTGCGATGTTGTGCGATGTTG
GACTCCGTTGAGTTGAAAGTTTGAGTTTTACACCACCCGCAGAGCGAGAC
AGGTTGGAGCCCCTGCTGTTTTTCAACAGGAACGATCTTAGTTCCCGATG
AAACCATGGGTCCCCTGCTGTGTCTCGCGCCATCCTGTCCCGGATGATGA
TGATTTCATCAAGGAAGATCTTTACGACTGGTGCATCCGCTCTCCGCTGG
AGTGTAAATATGTACTACAGTTAGTACAATATTGAAACATTTGCCGATGG
GGGACGAAGACAGACCAAACACAACTGTACACACACGCCGTGGTACACTC
GCCCCGCTACAATACCGCCAAGGAAACGCCACCTATTATATTAATATCAG
CTCTGCCGCCAATGGTGGCAGACACGCAAATACTACATAGAGCTCATCGG
GCAGTTCGGTGTGGAAAGGGGCAGGAGCACGGCGCAAACAGAGCCCTAAC
TGTTCTCCCGTCATGTCCTACTATCATCCGGAGTCTCTCATGTGTCATGT
TTCGCTCGCCGGAGGCGGCGGCCTTTATTTGCTTCCCGCATCCCCCGCCC
TATTCGTGTCCGGCGAAATACATCACACCTATCGCTCTGAATCGAATGTG
CCGGTTGCGTTAACAGCACCAACGCCTCGGGGTCGCTCTCTGCTGCTGCT
GCAGTAAGTCTCCAATCTACGATATATCCTATTTCACGCACCATCCTGAG
ATATTTAGAGCCTAGTTTTCTCCTGGGAAGAAGGGGACAAAAAATGCCGC
CGCTTCACCGTTCCGTGGCTCATTGTCACCCATCCCTGTGATGTTTTCTG
ACTCTGGGATGACATTGCCACTGATATCCAGAGAAAGTTTTGTCTCTGGC
TTCGTAGTGACTATTAATAGTTGCTGTGCAACGGCCAACAACACCCTTGG
AGTTCGCCCTCCACTTCCAATTTTGTGGCTTGATTGCTGGTGTCTCTCCC
CCACACAGCGTATATACAAGTAGTCGGCCGCTGACGTGGCAGGTGAAAGT
GTTGATTTTTCACTGGCCTCGCTGCCTCCGGAGGTTGCTTGCTTTGTCGC
CCTCCAACCCCACGTCTGTGTTGTTTTGTTCTCTCTCTCCCCCCCGTGCC
CCCTGTCCATCGATTTGTGCACGACATGTACCACCGTTGAAAAGTCATTC
TCTTGGCGCAGCATCCACACGGCAACTGGGTGTACGACCTCGACTCGACG
CTGGACTTTCCAAGCCCAGCATCGCTCTACATGACGCAGGCGTTCCGGAA
ACAAATGAACATCGACCAGCTATATAGACA GTGAGTTATTGTTGCTGATG
TTGTTGATTGTGCCGCTGCCGTTTCCTCCATGCAAGTGTTCTGCTAGCAC
CCTCTCGTTATTGACGAGTTGGACGTTGCGCTGTGCCACGTGAAGACGTA
GTTGCCCGCCCAAGATAAACGAGCCTGAGGTTCTAAAGCGGTACGATATG
GCCGTTTGCTGCGGTCGACATCTCTCCCTTGACAAAAAGAGAGGAATTAT
CCACACGCACCATCGGCAAATATGATGAGAAGATCAAACGCCGTCGACGT
CCAACGTAGGTATCGATTGGATGACAACTCTAGAGTTTTTTGGTTTTTGA
CACTGCCAAGAAACAAGGCGACGTTTTCGCTGGGCGGAATGCCAACTAAT
AAGAGCAGCAGGGTCGTTGCAGCAAGTGTATGCTGTACTTGTATCGACGA
ACACCTCTGTACTTGCGCAGGCATGCCTTAGCGGGACCTCGGTTTTGGCT
AACGCTAGAAACGCCGCCCAAATGCGGATGCCGGCGGCGACTTGTAGAAC
GCATTACCTCCAGAGGTGCTTGGAAGAAGAATGCCGACCGTGATTACTTT
CGTATGTATGTACATGCACAACAACTTCTCGAATGAAAGCAGTTCGCACA
CTGCCACGTACGTGGCCTGAACATTCCTTCAAAATAGGTTGGAAACAGGG
CGCTCCGGCAGCCGTTGGCGGACTGTTACGCTCACCAAGGTCAAGAAACT
CTTTTGGTGCGTATTTCGCAGAAACGACGAAAAAGTATATGCCCCCGCCT
CAAAAGACACACCAAACAGACTACGCGCGATTCAACCTCTCCGCCCACCA
CCAATATTGCATGCAGGATGTTCCGGGTTGTTGCGGCGCGGGAGTGCGTG
GACCACTTTTCATCGGACAGGTCGCACATGATTGAAGCGGGTGGAGGGTA
CAGCGCTCAGCCCCCAGGTTTTCCTCCGCTGCG GTGAGACTTTTTATATA
TTTGTTTTAGGGGTAGGCGTGACGGGAGAGGGATACAGAGAGCACCCAAG
AGGGCCAGCCAGCCACGCAGCCGGGGCAATCAGCAGGCAATCGTCTCTAG
ACCGACCACATTTACCTTCTCCACGCGGAGATGTTCCCAATCTCAAGAGC
GGTTCGTATTAATAGTACGAGACGAGCCTCTTCCTGAGTTGCCTGGTTGC
TGTGACGCGTTCCTACCTCAACGATGCGTGGAAGAGGATGCCCGGTCTCA
GTTTCCCACGTACTTGTATGCATACGCGTGCCAAGATTTTCCTCGTCTCG
AAAGTGATCTCCTTGATTCTTCACGGAGCGAGCGGAGCATGGTCCCGCCG
CTTCGGTTTTTGCTTTTTTTTTTGTTGTGTTTTTTTTTTGCCGTCGTCTC
CCGTCCCCCTCATTAGTGCCCAACACTTACTCCCGTCTGCAAGAACTTCC
AGATCGTTCAAGTGAACCACTGAGGTCTTTGTCTCATTTTCAAGGGATCC
TCTCGGTAAAAATTTCCCGATATTTTTCCGCGGTAATTGCGCCTGCAGCT
GGTCTCCACGATTGCCTACCGTACCGACGTGTACGGCGAATTTTGTGGGC
GTGTTTGGCGTGCGACATTTATTTTTTTTCACGTGTCCATGCTTCCCGTT
CAAGCCCACAATACGACCGTGCTCGTGCGTTGAAGGTCATGTCGTACGTG
GGAAACTGATGGCGTACGCTCTCCAGGGCCCCCGTTGTTTTTGTGCGGGT
AAAACAAACGTGTTGGAAAATGGTCAAGAAAATACTTGTGATTTGTGACT
GACGAAGCAGGGGTCCGCGGGCGACGAGTAGCAACAACATGAACGAGTGG
ATAAACATGGATGCTACCACCGGCCGAGGGAGGGTGCTGAACCTTGAAGA
CATGGAGGCGTTCGTAGCGCGTGGTCCTCATCGCTTCACATAG back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig102:80131..85573-
>mRNA_E-siliculosus-1a_F_contig102.191.1 ID=mRNA_E-siliculosus-1a_F_contig102.191.1|Name=mRNA_E-siliculosus-1a_F_contig102.191.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=1500bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig102:80131..85573- (Ectocarpus siliculosus Ec863f_EcPH12_90f female) back to top