mRNA_E-siliculosus-1a_F_contig102.191.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_F_contig102.191.1
Unique NamemRNA_E-siliculosus-1a_F_contig102.191.1
TypemRNA
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Homology
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BLAST of mRNA_E-siliculosus-1a_F_contig102.191.1 vs. uniprot
Match: A0A6H5K9A7_9PHAE (Protein N-terminal glutamine amidohydrolase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9A7_9PHAE)

HSP 1 Score: 450 bits (1157), Expect = 2.550e-159
Identity = 222/237 (93.67%), Postives = 224/237 (94.51%), Query Frame = 1 
Query:   40 MGPCGNKGWEGGGPSDGAARAASSAEGAPTPRSAR-PVLECTRADCRWYTSHYCEENSLRLCNHLLGRAESDGVQLSVVFVSNAARQVPVWFQRLADRRDEPVLWDYHVILLAQHPHGNWVYDLDSTLDFPSPASLYMTQAFRKQMNIDQLYRQMFRVVAARECVDHFSSDRSHMIEAGGGYSAQPPGFPPLRRGPRATSSNNMNEWINMDATTGRGRVLNLEDMEAFVARGPHRFT 747
            MGPCGNK WEGGGPSDGAARA SSAE APTP SAR PVLECTRADCRWYTSHYCEENSLRLCNHLLGRAES GVQLSVVFVSNAARQVPVWFQRLADRRDEPVLWDYHVILLAQHPHGNWVYDLDSTLDFPSPASLYMTQAFRK MNIDQ YRQMFRVV ARECVDHFSSDRSHM+E GGGYSA PPGFPPLR GPRATSSNNMNEWINMDATTGRGRVLNLE+ME FVARGPHRFT
Sbjct:    1 MGPCGNKDWEGGGPSDGAARAVSSAEVAPTPPSARRPVLECTRADCRWYTSHYCEENSLRLCNHLLGRAESAGVQLSVVFVSNAARQVPVWFQRLADRRDEPVLWDYHVILLAQHPHGNWVYDLDSTLDFPSPASLYMTQAFRKLMNIDQQYRQMFRVVPARECVDHFSSDRSHMMEEGGGYSALPPGFPPLR-GPRATSSNNMNEWINMDATTGRGRVLNLEEMETFVARGPHRFT 236
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BLAST of mRNA_E-siliculosus-1a_F_contig102.191.1 vs. uniprot
Match: D7G8M5_ECTSI (Protein N-terminal glutamine amidohydrolase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8M5_ECTSI)

HSP 1 Score: 218 bits (555), Expect = 1.760e-69
Identity = 105/107 (98.13%), Postives = 105/107 (98.13%), Query Frame = 1 
Query:   40 MGPCGNKGWEGGGPSDGAARAASSAEGAPTPRSARPVLECTRADCRWYTSHYCEENSLRLCNHLLGRAESDGVQLSVVFVSNAARQVPVWFQRLADRRDEPVLWDYH 360
            MGPCGNKGWEGGGPSDGAARAASSAE APTP SARPVLECTRADCRWYTSHYCEENSLRLCNHLLGRAESDGVQLSVVFVSNAARQVPVWFQRLADRRDEPVLWDYH
Sbjct:    1 MGPCGNKGWEGGGPSDGAARAASSAEVAPTPPSARPVLECTRADCRWYTSHYCEENSLRLCNHLLGRAESDGVQLSVVFVSNAARQVPVWFQRLADRRDEPVLWDYH 107
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BLAST of mRNA_E-siliculosus-1a_F_contig102.191.1 vs. uniprot
Match: D7G894_ECTSI (Protein N-terminal glutamine amidohydrolase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G894_ECTSI)

HSP 1 Score: 181 bits (460), Expect = 2.060e-55
Identity = 89/92 (96.74%), Postives = 89/92 (96.74%), Query Frame = 1 
Query:  472 MNIDQLYRQMFRVVAARECVDHFSSDRSHMIEAGGGYSAQPPGFPPLRRGPRATSSNNMNEWINMDATTGRGRVLNLEDMEAFVARGPHRFT 747
            MNIDQ YRQMFRVVAARECVDHFSSDRSHMIEAGG YSAQPPGFPPLR GPRATSSNNMNEWINMDATTGRGRVLNLEDMEAFVARGPHRFT
Sbjct:    1 MNIDQQYRQMFRVVAARECVDHFSSDRSHMIEAGGAYSAQPPGFPPLR-GPRATSSNNMNEWINMDATTGRGRVLNLEDMEAFVARGPHRFT 91
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BLAST of mRNA_E-siliculosus-1a_F_contig102.191.1 vs. uniprot
Match: UPI001AAC8754 (protein N-terminal glutamine amidohydrolase isoform X1 n=3 Tax=Rana temporaria TaxID=8407 RepID=UPI001AAC8754)

HSP 1 Score: 146 bits (369), Expect = 3.250e-40
Identity = 83/195 (42.56%), Postives = 115/195 (58.97%), Query Frame = 1 
Query:  127 TPRSARPVLECTRADCRWYTSHYCEENSLRLCNHLLGRAESDGVQLSVVFVSNAARQVPVWFQRLADRRDEPVLWDYHVILLAQHPHGN-WVYDLDSTLDFPSPASLYMTQAFRKQMNIDQLYRQMFRVVAARECVDHFSSDRSHMIEAGGGYSAQPPGFPPLRRGPRATSSNNMNEWINMDATTGRGRVLNLED 708
            TP S    L   R DC  YTS YCEEN  +LC ++  R+E    ++  VF+SN  R +P+W Q+   RRDEPV+WDYHVILL     G   +YDLDS L FP P  LY+ +A R   NI + +R+  R++ A E +  F+SDRSHM +A   +   PP +P +       SS N++++I+MD   G G+V  LE+
Sbjct:    2 TPSSQDRDLLPPRTDCP-YTSCYCEENVWKLCEYVRDRSERPLQEIYAVFLSNEKRMIPIWKQQCG-RRDEPVIWDYHVILLHVCSGGQRLIYDLDSVLPFPCPCELYVKEALRSDQNIRKDFRRKLRLIRADEFLRTFASDRSHMKDADNKWKKPPPPYPCIHT---EESSMNLDDFISMDPAVGYGKVYTLEE 191
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig102.191.1 vs. uniprot
Match: A0A6P7K340_9TELE (Protein N-terminal glutamine amidohydrolase n=1 Tax=Parambassis ranga TaxID=210632 RepID=A0A6P7K340_9TELE)

HSP 1 Score: 147 bits (370), Expect = 3.750e-40
Identity = 81/183 (44.26%), Postives = 110/183 (60.11%), Query Frame = 1 
Query:  160 TRADCRWYTSHYCEENSLRLCNHLLGRAESDGVQLSVVFVSNAARQVPVWFQRLADRRDEPVLWDYHVILL-AQHPHGNWVYDLDSTLDFPSPASLYMTQAFRKQMNIDQLYRQMFRVVAARECVDHFSSDRSHMIEAGGGYSAQPPGFPPLRRGPRATSSNNMNEWINMDATTGRGRVLNLE 705
            +R +C  YTS YCEEN  +LC  +     +   QL VVF+SN  R VP+W Q+ + RRD+PV+WDYHVILL A+HP    +YDLDS L FP    LY  QAFR   NI   Y +  RVV A   + +F++DRSHM  + G +   PP +PP+     A    N++++I+MD   G G V +L+
Sbjct:   10 SRENCA-YTSCYCEENVWKLCEFIRAERAAALEQLFVVFISNQNRTVPLWKQK-SGRRDQPVIWDYHVILLQARHPSDALIYDLDSELSFPCTLKLYADQAFRSDCNIRPEYHRKLRVVPANSFLLNFATDRSHMRNSDGSWKMPPPPYPPMNT---AECQMNLDDFISMDPAVGWGVVFSLD 187
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BLAST of mRNA_E-siliculosus-1a_F_contig102.191.1 vs. uniprot
Match: A0A819ISL8_9BILA (Protein N-terminal glutamine amidohydrolase n=4 Tax=Rotaria sordida TaxID=392033 RepID=A0A819ISL8_9BILA)

HSP 1 Score: 145 bits (365), Expect = 1.060e-39
Identity = 76/182 (41.76%), Postives = 110/182 (60.44%), Query Frame = 1 
Query:  181 YTSHYCEENSLRLCNHLLGRAESDGVQLSVVFVSNAARQVPVWFQRLADRRDEPVLWDYHVILLAQHPHGNWVYDLDSTLDFPSPASLYMTQAFRKQMNIDQLYRQMFRVVAARECVDHFSSDRSHMIEAGG-GYSAQPPGFPPLRRGPRATSSNNMNEWINMDATTGRGRVLNLEDMEAFV 723
            YTS YCEEN  +LC        +    L  VF+SN  RQ+P+W Q+ A   +   +WDYHVIL+ +    + +YD DSTL FP  A+ Y+  A R ++NI   Y +MFRV+ A++ +D F+SDRSHM++     Y A PP +PP+       S+NN+NE+I+M++  G G V+NL D   F+
Sbjct:   13 YTSCYCEENIWKLCECWKQNNPNHLNSLYAVFISNKRRQIPIWEQKSASNSEHLAIWDYHVILVDKSSSPSVIYDFDSTLPFPVSATNYIQLAIRDEINIVHRYHRMFRVIPAQQYLDVFASDRSHMLKEDKITYIASPPSYPPICN---QKSTNNINEFIDMESKNGPGIVMNLTDFRRFL 191
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BLAST of mRNA_E-siliculosus-1a_F_contig102.191.1 vs. uniprot
Match: UPI001BD6D019 (protein N-terminal glutamine amidohydrolase n=1 Tax=Cheilinus undulatus TaxID=241271 RepID=UPI001BD6D019)

HSP 1 Score: 144 bits (363), Expect = 2.730e-39
Identity = 79/184 (42.93%), Postives = 110/184 (59.78%), Query Frame = 1 
Query:  181 YTSHYCEENSLRLCNHLLGRAESDGVQLSVVFVSNAARQVPVWFQRLADRRDEPVLWDYHVILLAQHPH-GNWVYDLDSTLDFPSPASLYMTQAFRKQMNIDQLYRQMFRVVAARECVDHFSSDRSHMIEAGGGYSAQPPGFPPLRRGPRATSSNNMNEWINMDATTGRGRVLNLEDMEAFVAR 729
            YTS YCEEN  +LC ++     +   +L VVF+SN  R VP+W Q+ + R D+PV+WDYHVILL   P  G  +YDLDS L FP    LY++QA R   +++  Y +  RVV A   + +F+ DRSHM    G +   PP +PP+     A S  N++++I+MD   G G VL+L+D   FV R
Sbjct:   16 YTSCYCEENVWKLCEYVRTEGTAPLQELFVVFISNENRMVPLWKQK-SGRGDQPVIWDYHVILLQVRPQSGALIYDLDSELSFPCSLRLYVSQALRSDRHVNPAYHRKLRVVPADSFLSNFACDRSHMKNTDGSWRMPPPPYPPIHT---AESHMNLDDFISMDPQVGWGAVLSLDD---FVKR 192
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BLAST of mRNA_E-siliculosus-1a_F_contig102.191.1 vs. uniprot
Match: A0A6P3VJN1_CLUHA (Protein N-terminal glutamine amidohydrolase n=1 Tax=Clupea harengus TaxID=7950 RepID=A0A6P3VJN1_CLUHA)

HSP 1 Score: 144 bits (362), Expect = 6.790e-39
Identity = 80/196 (40.82%), Postives = 117/196 (59.69%), Query Frame = 1 
Query:  148 VLECTRADCRWYTSHYCEENSLRLCNHLLGRAESDGVQLSVVFVSNAARQVPVWFQRLADRRDEPVLWDYHVILLAQHPHGNWVYDLDSTLDFPSPASLYMTQAFRKQMNIDQLYRQMFRVVAARECVDHFSSDRSHMIEAGGGYSAQPPGFPPLRRGPRATSSNNMNEWINMDATTGRGRVLNL-EDMEAFVARG 732
            ++  ++ DC  YTS YCEEN  +LC ++  + +     +  VF+SN  R VP+W Q+   RRD+PV+WDYHVILL      ++VYDLD+TL FP P SLY  +AFR    + + Y +  RV+ A   +  F+SDRSHM +  G +   PP +P L     A S  N++ +I+MDA  G G+V +L E ++ F  +G
Sbjct:   12 IITPSKEDCV-YTSCYCEENIWKLCEYIKAQPQHCIQDVYAVFISNERRMVPLWKQKSC-RRDQPVVWDYHVILLHTGNRESYVYDLDTTLPFPCPLSLYEKEAFRSDHGLKESYWRKLRVIPAETFLSSFASDRSHMKDEVGHWRMLPPSYPCLET---AESKMNLDSFISMDAQIGWGKVYSLAEFVQHFGGKG 202
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BLAST of mRNA_E-siliculosus-1a_F_contig102.191.1 vs. uniprot
Match: UPI0020153C49 (protein N-terminal glutamine amidohydrolase isoform X1 n=3 Tax=Alosa TaxID=34772 RepID=UPI0020153C49)

HSP 1 Score: 142 bits (358), Expect = 2.090e-38
Identity = 79/197 (40.10%), Postives = 115/197 (58.38%), Query Frame = 1 
Query:  148 VLECTRADCRWYTSHYCEENSLRLCNHLLGRAESDGVQLSVVFVSNAARQVPVWFQRLADRRDEPVLWDYHVILLAQHPHG-NWVYDLDSTLDFPSPASLYMTQAFRKQMNIDQLYRQMFRVVAARECVDHFSSDRSHMIEAGGGYSAQPPGFPPLRRGPRATSSNNMNEWINMDATTGRGRVLNLED-MEAFVARG 732
            ++   R +C  YTS YCEEN  +LC H+  + +     +  VF+SN  R VP+W Q+ +   D+PV+WDYHVILL     G +++YDLD+ L +P P SLY  +AFR    + + YR+  RV+ A   +  F+SDRSHM +  G +   PP +P +     A S  N+N +I+MDA  G G+V +L + ME F   G
Sbjct:   12 IITPPREECV-YTSCYCEENIWKLCEHIKAQHQHCIQDVYAVFISNERRMVPIWKQK-SSHGDQPVVWDYHVILLHNWNSGESYIYDLDTVLPYPCPLSLYEKEAFRSDHYLKESYRRKLRVIPAETFLSSFASDRSHMKDEVGHWKMLPPSYPCIET---AESKMNLNYFISMDAQVGWGKVYSLSEFMEHFGGEG 203
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig102.191.1 vs. uniprot
Match: A0A310SUL1_XENTR (Protein N-terminal glutamine amidohydrolase n=1 Tax=Xenopus tropicalis TaxID=8364 RepID=A0A310SUL1_XENTR)

HSP 1 Score: 142 bits (357), Expect = 2.100e-38
Identity = 76/189 (40.21%), Postives = 116/189 (61.38%), Query Frame = 1 
Query:  145 PVLECTRADCRWYTSHYCEENSLRLCNHLLGRAESDGVQLSVVFVSNAARQVPVWFQRLADRRDEPVLWDYHVILLAQHPH-GNWVYDLDSTLDFPSPASLYMTQAFRKQMNIDQLYRQMFRVVAARECVDHFSSDRSHMIEAGGGYSAQPPGFPPLRRGPRATSSNNMNEWINMDATTGRGRVLNLED 708
            P L   R+DC  YT  YCEEN  +LC ++  +   D  + S VF+SN  + +P+W Q+ A + D PV+WDYHVILL +    GN+VYDLD+TL FPS  + Y+ +A +   NI   +++  RVV ARE +  F+SDRSHM ++   ++  PP +P ++    A S+ N+ ++I+M+   G G V +L +
Sbjct:    8 PSLLPGRSDCH-YTGCYCEENVWKLCEYIRDQRPCDLDEFSAVFISNENKMIPIWKQKSA-KGDGPVIWDYHVILLRESARDGNFVYDLDTTLAFPSSCNAYIREALKSDTNIHCDFKRKLRVVGAREFLQTFASDRSHMRDSSSNWTKPPPPYPCIQT---AESTMNLGDFISMNPEVGWGTVYSLAE 191
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig102.191.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K9A7_9PHAE2.550e-15993.67Protein N-terminal glutamine amidohydrolase n=1 Ta... [more]
D7G8M5_ECTSI1.760e-6998.13Protein N-terminal glutamine amidohydrolase n=1 Ta... [more]
D7G894_ECTSI2.060e-5596.74Protein N-terminal glutamine amidohydrolase n=1 Ta... [more]
UPI001AAC87543.250e-4042.56protein N-terminal glutamine amidohydrolase isofor... [more]
A0A6P7K340_9TELE3.750e-4044.26Protein N-terminal glutamine amidohydrolase n=1 Ta... [more]
A0A819ISL8_9BILA1.060e-3941.76Protein N-terminal glutamine amidohydrolase n=4 Ta... [more]
UPI001BD6D0192.730e-3942.93protein N-terminal glutamine amidohydrolase n=1 Ta... [more]
A0A6P3VJN1_CLUHA6.790e-3940.82Protein N-terminal glutamine amidohydrolase n=1 Ta... [more]
UPI0020153C492.090e-3840.10protein N-terminal glutamine amidohydrolase isofor... [more]
A0A310SUL1_XENTR2.100e-3840.21Protein N-terminal glutamine amidohydrolase n=1 Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig102contigE-siliculosus-1a_F_contig102:80131..85573 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Properties
Property NameValue
Start0
Stop1
Cds size750
Model size752
Exons5
Hectar predicted targeting categoryother localisation
BRITEko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029
Best eggNOG OGNA|NA|NA
Best tax levelEukaryota
COG Functional cat.S
EC3.5.1.122,6.1.1.1
Ec32 orthologEc-00_010770.1
Ec32 ortholog descriptionProtein N-terminal glutamine amidohydrolase, alpha beta roll
EggNOG OGsKOG3261@1,KOG3261@2759
EggNOG free text desc.hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides
GOsGO:0003008,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005829,GO:0006464,GO:0006807,GO:0007610,GO:0007611,GO:0007612,GO:0007635,GO:0008150,GO:0008152,GO:0008306,GO:0008355,GO:0009056,GO:0009057,GO:0009987,GO:0016787,GO:0016810,GO:0016811,GO:0019538,GO:0030163,GO:0032501,GO:0036211,GO:0042048,GO:0042221,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0050877,GO:0050890,GO:0050896,GO:0070773,GO:0071704,GO:1901564,GO:1901565,GO:1901575
KEGG ModuleM00359,M00360
KEGG Pathwayko00970,map00970
KEGG ReactionR02918,R11560
KEGG koko:K01866,ko:K21286
KEGG rclassRC00010,RC00055,RC00523
Preferred nameWDYHV1
Seed eggNOG ortholog2880.D7G8M5
Seed ortholog evalue5.9e-55
Seed ortholog score221.1
Taxonomic scopeEukaryota
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig102.191.1prot_E-siliculosus-1a_F_contig102.191.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalepolypeptideE-siliculosus-1a_F_contig102 80131..85573 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927524.250918-CDS-E-siliculosus-1a_F_contig102:80130..802661622927524.250918-CDS-E-siliculosus-1a_F_contig102:80130..80266Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig102 80131..80266 -
1696318566.666752-CDS-E-siliculosus-1a_F_contig102:80130..802661696318566.666752-CDS-E-siliculosus-1a_F_contig102:80130..80266Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig102 80131..80266 -
1622927524.264034-CDS-E-siliculosus-1a_F_contig102:81090..812071622927524.264034-CDS-E-siliculosus-1a_F_contig102:81090..81207Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig102 81091..81207 -
1696318566.6873183-CDS-E-siliculosus-1a_F_contig102:81090..812071696318566.6873183-CDS-E-siliculosus-1a_F_contig102:81090..81207Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig102 81091..81207 -
1622927524.27755-CDS-E-siliculosus-1a_F_contig102:82043..821791622927524.27755-CDS-E-siliculosus-1a_F_contig102:82043..82179Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig102 82044..82179 -
1696318566.7035987-CDS-E-siliculosus-1a_F_contig102:82043..821791696318566.7035987-CDS-E-siliculosus-1a_F_contig102:82043..82179Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig102 82044..82179 -
1622927524.2904654-CDS-E-siliculosus-1a_F_contig102:84238..844461622927524.2904654-CDS-E-siliculosus-1a_F_contig102:84238..84446Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig102 84239..84446 -
1696318566.7130308-CDS-E-siliculosus-1a_F_contig102:84238..844461696318566.7130308-CDS-E-siliculosus-1a_F_contig102:84238..84446Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig102 84239..84446 -
1622927524.3024254-CDS-E-siliculosus-1a_F_contig102:85420..855731622927524.3024254-CDS-E-siliculosus-1a_F_contig102:85420..85573Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig102 85421..85573 -
1696318566.7213929-CDS-E-siliculosus-1a_F_contig102:85420..855731696318566.7213929-CDS-E-siliculosus-1a_F_contig102:85420..85573Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig102 85421..85573 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_F_contig102.191.1

>prot_E-siliculosus-1a_F_contig102.191.1 ID=prot_E-siliculosus-1a_F_contig102.191.1|Name=mRNA_E-siliculosus-1a_F_contig102.191.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=250bp
LPRWRLSLGARWLMGPCGNKGWEGGGPSDGAARAASSAEGAPTPRSARPV
LECTRADCRWYTSHYCEENSLRLCNHLLGRAESDGVQLSVVFVSNAARQV
PVWFQRLADRRDEPVLWDYHVILLAQHPHGNWVYDLDSTLDFPSPASLYM
TQAFRKQMNIDQLYRQMFRVVAARECVDHFSSDRSHMIEAGGGYSAQPPG
FPPLRRGPRATSSNNMNEWINMDATTGRGRVLNLEDMEAFVARGPHRFT*
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mRNA from alignment at E-siliculosus-1a_F_contig102:80131..85573-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_F_contig102.191.1 ID=mRNA_E-siliculosus-1a_F_contig102.191.1|Name=mRNA_E-siliculosus-1a_F_contig102.191.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=5443bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig102:80131..85573- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
CTCCCCCGCTGGCGTCTATCGCTTGGGGCTCGCTGGCTCATGGGGCCATG
CGGAAACAAAGGCTGGGAAGGCGGTGGGCCTTCTGATGGCGCGGCTCGAG
CTGCGAGTTCCGCCGAAGGGGCGCCTACGCCGCGCTCAGCAAGACCGGTG
CTGGTGAGAAAGAGGTTGTCGAAACTCCCAAGATATGTGCGGAGCCTGCG
TGTGTATTGTGGTTTTGTACAAGGCGGTTCGTTTGGTCCTTGTCTGATGC
CGCGTGCGGAATCGCACCGACTCGTGGCCACTGGTGAGGACGGCTCGGTG
TTCGAAAGAGAGACGATAGCGAGGCAAAAAACGGCAGCAGTGGCTTGATT
CCCCTGCTTCCAACATCCTTGTGTGTCCGGGTTGTGTGCTGATCACGCAT
GTTGCGCTTCTGACGCAACGCGCTCGCAACACCAAAGTCCCCGGTCTTGG
TAGCATACTGGAGAAGACACCACCTGCATGAGAACCGGAGGTGTAGATAC
GTGATAGGATCCACCTCTCCTTTCGAGCGTGTAAGACACTGGGGGAGGAT
GGCTGCAGTATGGAGAGGAGCGAGCGGGAAGTCGGTACACAGACAGCGCG
TAGCTTTCTCACCGGACGTGCTGGTGTGTGTGTTTCGTACTAAACTTTTC
GTAGATTTCGTACCGTATTTCGTAGAGGTGCAGGTACGTAAGCAAGACAG
AGATTCGATATTGTACCGTTGTGGATCAGGTCTCGCCCCAACATGTTTAT
CAACATATGACCGAGCTCGCCGCTCGTGGACCCATCGTAGACCGCACACC
ACTACAATCTCCACACGCCTGCCGCGGAGCCCTCTCAAGACACAGTGAAG
TGAGACCGAGCACTGCTGTTTCTGTTCGCTCTGCGGCCCGAACGATTCTT
GTCTCTCCCTCTTGGTTGGCTGGTTTCTCTCACCAGAGCAACAAGCGAGC
GAGCGTGCCTGCTGCTGCTGTAGATCCATCTGGGAAACCACCCCTCCAAC
CCTTTCCCTCCCTCCCTCCCTCTGCCTCTCTATCTTTCTCTTCCTCTATG
TGGTCTCGACGCACGTGTTCATGATGATGAATAACACGGTCCGTGCTGCT
GCTGTTTGCCCCTCATTTAATTTCCAGGAATGCACCCGGGCAGACTGCCG
CTGGTACACATCCCACTACTGCGAGGAAAACTCTCTGCGCCTGTGTAACC
ACCTCCTCGGCAGGGCCGAGTCTGACGGTGTACAGCTCTCCGTCGTCTTC
GTGTCAAACGCGGCCCGCCAAGTGCCGGTGTGGTTCCAGCGTCTTGCCGA
CAGACGTGACGAGCCAGTTCTGTGGGATTACCACGGTAGGTAACAACCCT
TCTTGTGCGCTGTGAAGAGCCCTCTGTTTATCGTATGAATCAACCGCCAA
ACAATAAAGTCACACAGCAGGCGAGTTCCGTCTTCGTCTATCCCGGGATC
TTATGTACTTGTTGTCGGCCTCTGAGATTCCATGGATTACTGTCGACAGC
GTGCCCAAACTGCAGTGGAGACAGTTAGTGGCGCTGAAAAACAACTCAGT
GATATGTGTACCGGTCTGTACTTCAATAGAACATGCATAAAAACGCATAC
ACAACACATGATGACCAAAACTGGTGTTTTCTGAGGTGGCACGCAGCGCT
GGCCGTTGGACTGAGACAAGTTGGAGACTGCACAGCGGTTCGTCTCCGTC
TTCGAAGTGGGTAACTTTGCTTGTCGAGACCCCTCTACACCTCCTTTGTA
CAAGGAATTACTCTCGGACTTTGCCATCCTGTCCCTCTCTGTCGTGTTTC
TGGTGCTTTTGTCTCCGCTGTTGCGTCGGCATGCATGCTGCTGTCGAGAT
CTACTTGTGCTGTAGTACGCACGTGTTTGTATTGTAGGTATTGACATGCA
GGTAGATCTTGTATCCGCGGAGAAGCTATCATATATAGGCTCGTCATTTT
TCTCGTCTGATTTTCTGAGGTGGCACTCTGTGCGTTCACTGGAGAGGAGA
AACAGAGCCCATTTTTTGGTCTTCGTATTTACACAGTGTATATGGGTAGC
GAATTGTTGGTGCCCTCAACAACTGCTGTACGCCCCCAGATAGGTATGTA
CTGCTTTACAACTCAGCAGCAGCAGCAGCAGCAGCAGCACGAGATTACTG
TAGTTATTCACCGACTGCAGTACTAGGGGGTATTGGGCAGCCGCGGAGTA
CGACTCAACCACTACCGGCAATAGGCTATCTGCGATGTTGTGCGATGTTG
GACTCCGTTGAGTTGAAAGTTTGAGTTTTACACCACCCGCAGAGCGAGAC
AGGTTGGAGCCCCTGCTGTTTTTCAACAGGAACGATCTTAGTTCCCGATG
AAACCATGGGTCCCCTGCTGTGTCTCGCGCCATCCTGTCCCGGATGATGA
TGATTTCATCAAGGAAGATCTTTACGACTGGTGCATCCGCTCTCCGCTGG
AGTGTAAATATGTACTACAGTTAGTACAATATTGAAACATTTGCCGATGG
GGGACGAAGACAGACCAAACACAACTGTACACACACGCCGTGGTACACTC
GCCCCGCTACAATACCGCCAAGGAAACGCCACCTATTATATTAATATCAG
CTCTGCCGCCAATGGTGGCAGACACGCAAATACTACATAGAGCTCATCGG
GCAGTTCGGTGTGGAAAGGGGCAGGAGCACGGCGCAAACAGAGCCCTAAC
TGTTCTCCCGTCATGTCCTACTATCATCCGGAGTCTCTCATGTGTCATGT
TTCGCTCGCCGGAGGCGGCGGCCTTTATTTGCTTCCCGCATCCCCCGCCC
TATTCGTGTCCGGCGAAATACATCACACCTATCGCTCTGAATCGAATGTG
CCGGTTGCGTTAACAGCACCAACGCCTCGGGGTCGCTCTCTGCTGCTGCT
GCAGTAAGTCTCCAATCTACGATATATCCTATTTCACGCACCATCCTGAG
ATATTTAGAGCCTAGTTTTCTCCTGGGAAGAAGGGGACAAAAAATGCCGC
CGCTTCACCGTTCCGTGGCTCATTGTCACCCATCCCTGTGATGTTTTCTG
ACTCTGGGATGACATTGCCACTGATATCCAGAGAAAGTTTTGTCTCTGGC
TTCGTAGTGACTATTAATAGTTGCTGTGCAACGGCCAACAACACCCTTGG
AGTTCGCCCTCCACTTCCAATTTTGTGGCTTGATTGCTGGTGTCTCTCCC
CCACACAGCGTATATACAAGTAGTCGGCCGCTGACGTGGCAGGTGAAAGT
GTTGATTTTTCACTGGCCTCGCTGCCTCCGGAGGTTGCTTGCTTTGTCGC
CCTCCAACCCCACGTCTGTGTTGTTTTGTTCTCTCTCTCCCCCCCGTGCC
CCCTGTCCATCGATTTGTGCACGACATGTACCACCGTTGAAAAGTCATTC
TCTTGGCGCAGCATCCACACGGCAACTGGGTGTACGACCTCGACTCGACG
CTGGACTTTCCAAGCCCAGCATCGCTCTACATGACGCAGGCGTTCCGGAA
ACAAATGAACATCGACCAGCTATATAGACAGTGAGTTATTGTTGCTGATG
TTGTTGATTGTGCCGCTGCCGTTTCCTCCATGCAAGTGTTCTGCTAGCAC
CCTCTCGTTATTGACGAGTTGGACGTTGCGCTGTGCCACGTGAAGACGTA
GTTGCCCGCCCAAGATAAACGAGCCTGAGGTTCTAAAGCGGTACGATATG
GCCGTTTGCTGCGGTCGACATCTCTCCCTTGACAAAAAGAGAGGAATTAT
CCACACGCACCATCGGCAAATATGATGAGAAGATCAAACGCCGTCGACGT
CCAACGTAGGTATCGATTGGATGACAACTCTAGAGTTTTTTGGTTTTTGA
CACTGCCAAGAAACAAGGCGACGTTTTCGCTGGGCGGAATGCCAACTAAT
AAGAGCAGCAGGGTCGTTGCAGCAAGTGTATGCTGTACTTGTATCGACGA
ACACCTCTGTACTTGCGCAGGCATGCCTTAGCGGGACCTCGGTTTTGGCT
AACGCTAGAAACGCCGCCCAAATGCGGATGCCGGCGGCGACTTGTAGAAC
GCATTACCTCCAGAGGTGCTTGGAAGAAGAATGCCGACCGTGATTACTTT
CGTATGTATGTACATGCACAACAACTTCTCGAATGAAAGCAGTTCGCACA
CTGCCACGTACGTGGCCTGAACATTCCTTCAAAATAGGTTGGAAACAGGG
CGCTCCGGCAGCCGTTGGCGGACTGTTACGCTCACCAAGGTCAAGAAACT
CTTTTGGTGCGTATTTCGCAGAAACGACGAAAAAGTATATGCCCCCGCCT
CAAAAGACACACCAAACAGACTACGCGCGATTCAACCTCTCCGCCCACCA
CCAATATTGCATGCAGGATGTTCCGGGTTGTTGCGGCGCGGGAGTGCGTG
GACCACTTTTCATCGGACAGGTCGCACATGATTGAAGCGGGTGGAGGGTA
CAGCGCTCAGCCCCCAGGTTTTCCTCCGCTGCGGTGAGACTTTTTATATA
TTTGTTTTAGGGGTAGGCGTGACGGGAGAGGGATACAGAGAGCACCCAAG
AGGGCCAGCCAGCCACGCAGCCGGGGCAATCAGCAGGCAATCGTCTCTAG
ACCGACCACATTTACCTTCTCCACGCGGAGATGTTCCCAATCTCAAGAGC
GGTTCGTATTAATAGTACGAGACGAGCCTCTTCCTGAGTTGCCTGGTTGC
TGTGACGCGTTCCTACCTCAACGATGCGTGGAAGAGGATGCCCGGTCTCA
GTTTCCCACGTACTTGTATGCATACGCGTGCCAAGATTTTCCTCGTCTCG
AAAGTGATCTCCTTGATTCTTCACGGAGCGAGCGGAGCATGGTCCCGCCG
CTTCGGTTTTTGCTTTTTTTTTTGTTGTGTTTTTTTTTTGCCGTCGTCTC
CCGTCCCCCTCATTAGTGCCCAACACTTACTCCCGTCTGCAAGAACTTCC
AGATCGTTCAAGTGAACCACTGAGGTCTTTGTCTCATTTTCAAGGGATCC
TCTCGGTAAAAATTTCCCGATATTTTTCCGCGGTAATTGCGCCTGCAGCT
GGTCTCCACGATTGCCTACCGTACCGACGTGTACGGCGAATTTTGTGGGC
GTGTTTGGCGTGCGACATTTATTTTTTTTCACGTGTCCATGCTTCCCGTT
CAAGCCCACAATACGACCGTGCTCGTGCGTTGAAGGTCATGTCGTACGTG
GGAAACTGATGGCGTACGCTCTCCAGGGCCCCCGTTGTTTTTGTGCGGGT
AAAACAAACGTGTTGGAAAATGGTCAAGAAAATACTTGTGATTTGTGACT
GACGAAGCAGGGGTCCGCGGGCGACGAGTAGCAACAACATGAACGAGTGG
ATAAACATGGATGCTACCACCGGCCGAGGGAGGGTGCTGAACCTTGAAGA
CATGGAGGCGTTCGTAGCGCGTGGTCCTCATCGCTTCACATAG
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Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig102:80131..85573-

>mRNA_E-siliculosus-1a_F_contig102.191.1 ID=mRNA_E-siliculosus-1a_F_contig102.191.1|Name=mRNA_E-siliculosus-1a_F_contig102.191.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=1500bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig102:80131..85573- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
CTCCCCCGCTGGCGTCTATCGCTTGGGGCTCGCTGGCTCATGGGGCCATG
CGGAAACAAAGGCTGGGAAGGCGGTGGGCCTTCTGATGGCGCGGCTCGAG
CTGCGAGTTCCGCCGAAGGGGCGCCTACGCCGCGCTCAGCAAGACCGGTG
CTGCTCCCCCGCTGGCGTCTATCGCTTGGGGCTCGCTGGCTCATGGGGCC
ATGCGGAAACAAAGGCTGGGAAGGCGGTGGGCCTTCTGATGGCGCGGCTC
GAGCTGCGAGTTCCGCCGAAGGGGCGCCTACGCCGCGCTCAGCAAGACCG
GTGCTGGAATGCACCCGGGCAGACTGCCGCTGGTACACATCCCACTACTG
CGAGGAAAACTCTCTGCGCCTGTGTAACCACCTCCTCGGCAGGGCCGAGT
CTGACGGTGTACAGCTCTCCGTCGTCTTCGTGTCAAACGCGGCCCGCCAA
GTGCCGGTGTGGTTCCAGCGTCTTGCCGACAGACGTGACGAGCCAGTTCT
GTGGGATTACCACGGAATGCACCCGGGCAGACTGCCGCTGGTACACATCC
CACTACTGCGAGGAAAACTCTCTGCGCCTGTGTAACCACCTCCTCGGCAG
GGCCGAGTCTGACGGTGTACAGCTCTCCGTCGTCTTCGTGTCAAACGCGG
CCCGCCAAGTGCCGGTGTGGTTCCAGCGTCTTGCCGACAGACGTGACGAG
CCAGTTCTGTGGGATTACCACGTCATTCTCTTGGCGCAGCATCCACACGG
CAACTGGGTGTACGACCTCGACTCGACGCTGGACTTTCCAAGCCCAGCAT
CGCTCTACATGACGCAGGCGTTCCGGAAACAAATGAACATCGACCAGCTA
TATAGACATCATTCTCTTGGCGCAGCATCCACACGGCAACTGGGTGTACG
ACCTCGACTCGACGCTGGACTTTCCAAGCCCAGCATCGCTCTACATGACG
CAGGCGTTCCGGAAACAAATGAACATCGACCAGCTATATAGACAGATGTT
CCGGGTTGTTGCGGCGCGGGAGTGCGTGGACCACTTTTCATCGGACAGGT
CGCACATGATTGAAGCGGGTGGAGGGTACAGCGCTCAGCCCCCAGGTTTT
CCTCCGCTGCGGATGTTCCGGGTTGTTGCGGCGCGGGAGTGCGTGGACCA
CTTTTCATCGGACAGGTCGCACATGATTGAAGCGGGTGGAGGGTACAGCG
CTCAGCCCCCAGGTTTTCCTCCGCTGCGCAGGGGTCCGCGGGCGACGAGT
AGCAACAACATGAACGAGTGGATAAACATGGATGCTACCACCGGCCGAGG
GAGGGTGCTGAACCTTGAAGACATGGAGGCGTTCGTAGCGCGTGGTCCTC
ATCGCTTCACATAGCAGGGGTCCGCGGGCGACGAGTAGCAACAACATGAA
CGAGTGGATAAACATGGATGCTACCACCGGCCGAGGGAGGGTGCTGAACC
TTGAAGACATGGAGGCGTTCGTAGCGCGTGGTCCTCATCGCTTCACATAG
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