mRNA_E-siliculosus-1a_F_contig102.191.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig102.191.1 vs. uniprot
Match: A0A6H5K9A7_9PHAE (Protein N-terminal glutamine amidohydrolase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9A7_9PHAE) HSP 1 Score: 450 bits (1157), Expect = 2.550e-159 Identity = 222/237 (93.67%), Postives = 224/237 (94.51%), Query Frame = 1 Query: 40 MGPCGNKGWEGGGPSDGAARAASSAEGAPTPRSAR-PVLECTRADCRWYTSHYCEENSLRLCNHLLGRAESDGVQLSVVFVSNAARQVPVWFQRLADRRDEPVLWDYHVILLAQHPHGNWVYDLDSTLDFPSPASLYMTQAFRKQMNIDQLYRQMFRVVAARECVDHFSSDRSHMIEAGGGYSAQPPGFPPLRRGPRATSSNNMNEWINMDATTGRGRVLNLEDMEAFVARGPHRFT 747
MGPCGNK WEGGGPSDGAARA SSAE APTP SAR PVLECTRADCRWYTSHYCEENSLRLCNHLLGRAES GVQLSVVFVSNAARQVPVWFQRLADRRDEPVLWDYHVILLAQHPHGNWVYDLDSTLDFPSPASLYMTQAFRK MNIDQ YRQMFRVV ARECVDHFSSDRSHM+E GGGYSA PPGFPPLR GPRATSSNNMNEWINMDATTGRGRVLNLE+ME FVARGPHRFT
Sbjct: 1 MGPCGNKDWEGGGPSDGAARAVSSAEVAPTPPSARRPVLECTRADCRWYTSHYCEENSLRLCNHLLGRAESAGVQLSVVFVSNAARQVPVWFQRLADRRDEPVLWDYHVILLAQHPHGNWVYDLDSTLDFPSPASLYMTQAFRKLMNIDQQYRQMFRVVPARECVDHFSSDRSHMMEEGGGYSALPPGFPPLR-GPRATSSNNMNEWINMDATTGRGRVLNLEEMETFVARGPHRFT 236
BLAST of mRNA_E-siliculosus-1a_F_contig102.191.1 vs. uniprot
Match: D7G8M5_ECTSI (Protein N-terminal glutamine amidohydrolase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8M5_ECTSI) HSP 1 Score: 218 bits (555), Expect = 1.760e-69 Identity = 105/107 (98.13%), Postives = 105/107 (98.13%), Query Frame = 1 Query: 40 MGPCGNKGWEGGGPSDGAARAASSAEGAPTPRSARPVLECTRADCRWYTSHYCEENSLRLCNHLLGRAESDGVQLSVVFVSNAARQVPVWFQRLADRRDEPVLWDYH 360
MGPCGNKGWEGGGPSDGAARAASSAE APTP SARPVLECTRADCRWYTSHYCEENSLRLCNHLLGRAESDGVQLSVVFVSNAARQVPVWFQRLADRRDEPVLWDYH
Sbjct: 1 MGPCGNKGWEGGGPSDGAARAASSAEVAPTPPSARPVLECTRADCRWYTSHYCEENSLRLCNHLLGRAESDGVQLSVVFVSNAARQVPVWFQRLADRRDEPVLWDYH 107
BLAST of mRNA_E-siliculosus-1a_F_contig102.191.1 vs. uniprot
Match: D7G894_ECTSI (Protein N-terminal glutamine amidohydrolase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G894_ECTSI) HSP 1 Score: 181 bits (460), Expect = 2.060e-55 Identity = 89/92 (96.74%), Postives = 89/92 (96.74%), Query Frame = 1 Query: 472 MNIDQLYRQMFRVVAARECVDHFSSDRSHMIEAGGGYSAQPPGFPPLRRGPRATSSNNMNEWINMDATTGRGRVLNLEDMEAFVARGPHRFT 747
MNIDQ YRQMFRVVAARECVDHFSSDRSHMIEAGG YSAQPPGFPPLR GPRATSSNNMNEWINMDATTGRGRVLNLEDMEAFVARGPHRFT
Sbjct: 1 MNIDQQYRQMFRVVAARECVDHFSSDRSHMIEAGGAYSAQPPGFPPLR-GPRATSSNNMNEWINMDATTGRGRVLNLEDMEAFVARGPHRFT 91
BLAST of mRNA_E-siliculosus-1a_F_contig102.191.1 vs. uniprot
Match: UPI001AAC8754 (protein N-terminal glutamine amidohydrolase isoform X1 n=3 Tax=Rana temporaria TaxID=8407 RepID=UPI001AAC8754) HSP 1 Score: 146 bits (369), Expect = 3.250e-40 Identity = 83/195 (42.56%), Postives = 115/195 (58.97%), Query Frame = 1 Query: 127 TPRSARPVLECTRADCRWYTSHYCEENSLRLCNHLLGRAESDGVQLSVVFVSNAARQVPVWFQRLADRRDEPVLWDYHVILLAQHPHGN-WVYDLDSTLDFPSPASLYMTQAFRKQMNIDQLYRQMFRVVAARECVDHFSSDRSHMIEAGGGYSAQPPGFPPLRRGPRATSSNNMNEWINMDATTGRGRVLNLED 708
TP S L R DC YTS YCEEN +LC ++ R+E ++ VF+SN R +P+W Q+ RRDEPV+WDYHVILL G +YDLDS L FP P LY+ +A R NI + +R+ R++ A E + F+SDRSHM +A + PP +P + SS N++++I+MD G G+V LE+
Sbjct: 2 TPSSQDRDLLPPRTDCP-YTSCYCEENVWKLCEYVRDRSERPLQEIYAVFLSNEKRMIPIWKQQCG-RRDEPVIWDYHVILLHVCSGGQRLIYDLDSVLPFPCPCELYVKEALRSDQNIRKDFRRKLRLIRADEFLRTFASDRSHMKDADNKWKKPPPPYPCIHT---EESSMNLDDFISMDPAVGYGKVYTLEE 191
BLAST of mRNA_E-siliculosus-1a_F_contig102.191.1 vs. uniprot
Match: A0A6P7K340_9TELE (Protein N-terminal glutamine amidohydrolase n=1 Tax=Parambassis ranga TaxID=210632 RepID=A0A6P7K340_9TELE) HSP 1 Score: 147 bits (370), Expect = 3.750e-40 Identity = 81/183 (44.26%), Postives = 110/183 (60.11%), Query Frame = 1 Query: 160 TRADCRWYTSHYCEENSLRLCNHLLGRAESDGVQLSVVFVSNAARQVPVWFQRLADRRDEPVLWDYHVILL-AQHPHGNWVYDLDSTLDFPSPASLYMTQAFRKQMNIDQLYRQMFRVVAARECVDHFSSDRSHMIEAGGGYSAQPPGFPPLRRGPRATSSNNMNEWINMDATTGRGRVLNLE 705
+R +C YTS YCEEN +LC + + QL VVF+SN R VP+W Q+ + RRD+PV+WDYHVILL A+HP +YDLDS L FP LY QAFR NI Y + RVV A + +F++DRSHM + G + PP +PP+ A N++++I+MD G G V +L+
Sbjct: 10 SRENCA-YTSCYCEENVWKLCEFIRAERAAALEQLFVVFISNQNRTVPLWKQK-SGRRDQPVIWDYHVILLQARHPSDALIYDLDSELSFPCTLKLYADQAFRSDCNIRPEYHRKLRVVPANSFLLNFATDRSHMRNSDGSWKMPPPPYPPMNT---AECQMNLDDFISMDPAVGWGVVFSLD 187
BLAST of mRNA_E-siliculosus-1a_F_contig102.191.1 vs. uniprot
Match: A0A819ISL8_9BILA (Protein N-terminal glutamine amidohydrolase n=4 Tax=Rotaria sordida TaxID=392033 RepID=A0A819ISL8_9BILA) HSP 1 Score: 145 bits (365), Expect = 1.060e-39 Identity = 76/182 (41.76%), Postives = 110/182 (60.44%), Query Frame = 1 Query: 181 YTSHYCEENSLRLCNHLLGRAESDGVQLSVVFVSNAARQVPVWFQRLADRRDEPVLWDYHVILLAQHPHGNWVYDLDSTLDFPSPASLYMTQAFRKQMNIDQLYRQMFRVVAARECVDHFSSDRSHMIEAGG-GYSAQPPGFPPLRRGPRATSSNNMNEWINMDATTGRGRVLNLEDMEAFV 723
YTS YCEEN +LC + L VF+SN RQ+P+W Q+ A + +WDYHVIL+ + + +YD DSTL FP A+ Y+ A R ++NI Y +MFRV+ A++ +D F+SDRSHM++ Y A PP +PP+ S+NN+NE+I+M++ G G V+NL D F+
Sbjct: 13 YTSCYCEENIWKLCECWKQNNPNHLNSLYAVFISNKRRQIPIWEQKSASNSEHLAIWDYHVILVDKSSSPSVIYDFDSTLPFPVSATNYIQLAIRDEINIVHRYHRMFRVIPAQQYLDVFASDRSHMLKEDKITYIASPPSYPPICN---QKSTNNINEFIDMESKNGPGIVMNLTDFRRFL 191
BLAST of mRNA_E-siliculosus-1a_F_contig102.191.1 vs. uniprot
Match: UPI001BD6D019 (protein N-terminal glutamine amidohydrolase n=1 Tax=Cheilinus undulatus TaxID=241271 RepID=UPI001BD6D019) HSP 1 Score: 144 bits (363), Expect = 2.730e-39 Identity = 79/184 (42.93%), Postives = 110/184 (59.78%), Query Frame = 1 Query: 181 YTSHYCEENSLRLCNHLLGRAESDGVQLSVVFVSNAARQVPVWFQRLADRRDEPVLWDYHVILLAQHPH-GNWVYDLDSTLDFPSPASLYMTQAFRKQMNIDQLYRQMFRVVAARECVDHFSSDRSHMIEAGGGYSAQPPGFPPLRRGPRATSSNNMNEWINMDATTGRGRVLNLEDMEAFVAR 729
YTS YCEEN +LC ++ + +L VVF+SN R VP+W Q+ + R D+PV+WDYHVILL P G +YDLDS L FP LY++QA R +++ Y + RVV A + +F+ DRSHM G + PP +PP+ A S N++++I+MD G G VL+L+D FV R
Sbjct: 16 YTSCYCEENVWKLCEYVRTEGTAPLQELFVVFISNENRMVPLWKQK-SGRGDQPVIWDYHVILLQVRPQSGALIYDLDSELSFPCSLRLYVSQALRSDRHVNPAYHRKLRVVPADSFLSNFACDRSHMKNTDGSWRMPPPPYPPIHT---AESHMNLDDFISMDPQVGWGAVLSLDD---FVKR 192
BLAST of mRNA_E-siliculosus-1a_F_contig102.191.1 vs. uniprot
Match: A0A6P3VJN1_CLUHA (Protein N-terminal glutamine amidohydrolase n=1 Tax=Clupea harengus TaxID=7950 RepID=A0A6P3VJN1_CLUHA) HSP 1 Score: 144 bits (362), Expect = 6.790e-39 Identity = 80/196 (40.82%), Postives = 117/196 (59.69%), Query Frame = 1 Query: 148 VLECTRADCRWYTSHYCEENSLRLCNHLLGRAESDGVQLSVVFVSNAARQVPVWFQRLADRRDEPVLWDYHVILLAQHPHGNWVYDLDSTLDFPSPASLYMTQAFRKQMNIDQLYRQMFRVVAARECVDHFSSDRSHMIEAGGGYSAQPPGFPPLRRGPRATSSNNMNEWINMDATTGRGRVLNL-EDMEAFVARG 732
++ ++ DC YTS YCEEN +LC ++ + + + VF+SN R VP+W Q+ RRD+PV+WDYHVILL ++VYDLD+TL FP P SLY +AFR + + Y + RV+ A + F+SDRSHM + G + PP +P L A S N++ +I+MDA G G+V +L E ++ F +G
Sbjct: 12 IITPSKEDCV-YTSCYCEENIWKLCEYIKAQPQHCIQDVYAVFISNERRMVPLWKQKSC-RRDQPVVWDYHVILLHTGNRESYVYDLDTTLPFPCPLSLYEKEAFRSDHGLKESYWRKLRVIPAETFLSSFASDRSHMKDEVGHWRMLPPSYPCLET---AESKMNLDSFISMDAQIGWGKVYSLAEFVQHFGGKG 202
BLAST of mRNA_E-siliculosus-1a_F_contig102.191.1 vs. uniprot
Match: UPI0020153C49 (protein N-terminal glutamine amidohydrolase isoform X1 n=3 Tax=Alosa TaxID=34772 RepID=UPI0020153C49) HSP 1 Score: 142 bits (358), Expect = 2.090e-38 Identity = 79/197 (40.10%), Postives = 115/197 (58.38%), Query Frame = 1 Query: 148 VLECTRADCRWYTSHYCEENSLRLCNHLLGRAESDGVQLSVVFVSNAARQVPVWFQRLADRRDEPVLWDYHVILLAQHPHG-NWVYDLDSTLDFPSPASLYMTQAFRKQMNIDQLYRQMFRVVAARECVDHFSSDRSHMIEAGGGYSAQPPGFPPLRRGPRATSSNNMNEWINMDATTGRGRVLNLED-MEAFVARG 732
++ R +C YTS YCEEN +LC H+ + + + VF+SN R VP+W Q+ + D+PV+WDYHVILL G +++YDLD+ L +P P SLY +AFR + + YR+ RV+ A + F+SDRSHM + G + PP +P + A S N+N +I+MDA G G+V +L + ME F G
Sbjct: 12 IITPPREECV-YTSCYCEENIWKLCEHIKAQHQHCIQDVYAVFISNERRMVPIWKQK-SSHGDQPVVWDYHVILLHNWNSGESYIYDLDTVLPYPCPLSLYEKEAFRSDHYLKESYRRKLRVIPAETFLSSFASDRSHMKDEVGHWKMLPPSYPCIET---AESKMNLNYFISMDAQVGWGKVYSLSEFMEHFGGEG 203
BLAST of mRNA_E-siliculosus-1a_F_contig102.191.1 vs. uniprot
Match: A0A310SUL1_XENTR (Protein N-terminal glutamine amidohydrolase n=1 Tax=Xenopus tropicalis TaxID=8364 RepID=A0A310SUL1_XENTR) HSP 1 Score: 142 bits (357), Expect = 2.100e-38 Identity = 76/189 (40.21%), Postives = 116/189 (61.38%), Query Frame = 1 Query: 145 PVLECTRADCRWYTSHYCEENSLRLCNHLLGRAESDGVQLSVVFVSNAARQVPVWFQRLADRRDEPVLWDYHVILLAQHPH-GNWVYDLDSTLDFPSPASLYMTQAFRKQMNIDQLYRQMFRVVAARECVDHFSSDRSHMIEAGGGYSAQPPGFPPLRRGPRATSSNNMNEWINMDATTGRGRVLNLED 708
P L R+DC YT YCEEN +LC ++ + D + S VF+SN + +P+W Q+ A + D PV+WDYHVILL + GN+VYDLD+TL FPS + Y+ +A + NI +++ RVV ARE + F+SDRSHM ++ ++ PP +P ++ A S+ N+ ++I+M+ G G V +L +
Sbjct: 8 PSLLPGRSDCH-YTGCYCEENVWKLCEYIRDQRPCDLDEFSAVFISNENKMIPIWKQKSA-KGDGPVIWDYHVILLRESARDGNFVYDLDTTLAFPSSCNAYIREALKSDTNIHCDFKRKLRVVGAREFLQTFASDRSHMRDSSSNWTKPPPPYPCIQT---AESTMNLGDFISMNPEVGWGTVYSLAE 191 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig102.191.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig102.191.1 >prot_E-siliculosus-1a_F_contig102.191.1 ID=prot_E-siliculosus-1a_F_contig102.191.1|Name=mRNA_E-siliculosus-1a_F_contig102.191.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=250bp LPRWRLSLGARWLMGPCGNKGWEGGGPSDGAARAASSAEGAPTPRSARPVback to top mRNA from alignment at E-siliculosus-1a_F_contig102:80131..85573- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig102.191.1 ID=mRNA_E-siliculosus-1a_F_contig102.191.1|Name=mRNA_E-siliculosus-1a_F_contig102.191.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=5443bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig102:80131..85573- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig102:80131..85573- >mRNA_E-siliculosus-1a_F_contig102.191.1 ID=mRNA_E-siliculosus-1a_F_contig102.191.1|Name=mRNA_E-siliculosus-1a_F_contig102.191.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=1500bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig102:80131..85573- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |