Homology
BLAST of mRNA_E-siliculosus-1a_F_contig10192.182.1 vs. uniprot
Match:
D7G017_ECTSI (Tub domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G017_ECTSI)
HSP 1 Score: 94.0 bits (232), Expect = 3.240e-21
Identity = 43/44 (97.73%), Postives = 44/44 (100.00%), Query Frame = 1
Query: 4 EGSDIITFETLSPSWNEVLHAWTLNFNGRVKIPSKKNFLVAPEK 135
EGSDIITFETLSPSWNEVLHAWTLNFNGRVKIPSKKNFLV+PEK
Sbjct: 456 EGSDIITFETLSPSWNEVLHAWTLNFNGRVKIPSKKNFLVSPEK 499
BLAST of mRNA_E-siliculosus-1a_F_contig10192.182.1 vs. uniprot
Match:
A0A8K1C842_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C842_PYTOL)
HSP 1 Score: 68.6 bits (166), Expect = 2.940e-12
Identity = 29/41 (70.73%), Postives = 34/41 (82.93%), Query Frame = 1
Query: 13 DIITFETLSPSWNEVLHAWTLNFNGRVKIPSKKNFLVAPEK 135
D++ FET PSWNE L AWTLNFNGRVK+PSKKNFL+ E+
Sbjct: 549 DLLVFETRKPSWNEELGAWTLNFNGRVKLPSKKNFLIVAEE 589
BLAST of mRNA_E-siliculosus-1a_F_contig10192.182.1 vs. uniprot
Match:
A0A2D4C602_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C602_PYTIN)
HSP 1 Score: 67.4 bits (163), Expect = 7.460e-12
Identity = 29/40 (72.50%), Postives = 33/40 (82.50%), Query Frame = 1
Query: 13 DIITFETLSPSWNEVLHAWTLNFNGRVKIPSKKNFLVAPE 132
D++TFET PSWNE L AWTLNF GRVK+ SKKNFL+ PE
Sbjct: 391 DLLTFETKKPSWNEELGAWTLNFQGRVKMASKKNFLIVPE 430
BLAST of mRNA_E-siliculosus-1a_F_contig10192.182.1 vs. uniprot
Match:
A0A836CGA0_9STRA (Tubby C-terminal-like domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGA0_9STRA)
HSP 1 Score: 67.4 bits (163), Expect = 7.480e-12
Identity = 30/42 (71.43%), Postives = 33/42 (78.57%), Query Frame = 1
Query: 10 SDIITFETLSPSWNEVLHAWTLNFNGRVKIPSKKNFLVAPEK 135
SDI+ ET PSWN L AW LNFNGRV+IPSKKNFL APE+
Sbjct: 378 SDIMVLETKRPSWNPALEAWVLNFNGRVRIPSKKNFLGAPER 419
BLAST of mRNA_E-siliculosus-1a_F_contig10192.182.1 vs. uniprot
Match:
A0A5D6XV38_9STRA (PDZ domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XV38_9STRA)
HSP 1 Score: 66.6 bits (161), Expect = 1.400e-11
Identity = 28/44 (63.64%), Postives = 37/44 (84.09%), Query Frame = 1
Query: 13 DIITFETLSPSWNEVLHAWTLNFNGRVKIPSKKNFLVAPEKVSS 144
D++TFET P+WN+ L AWTLNF+GRVK+ SKKNFL+ PE+ S+
Sbjct: 653 DLLTFETKKPAWNDELGAWTLNFHGRVKLASKKNFLLVPEQGSA 696
BLAST of mRNA_E-siliculosus-1a_F_contig10192.182.1 vs. uniprot
Match:
K3X577_GLOUD (PDZ domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X577_GLOUD)
HSP 1 Score: 65.5 bits (158), Expect = 3.580e-11
Identity = 27/41 (65.85%), Postives = 35/41 (85.37%), Query Frame = 1
Query: 13 DIITFETLSPSWNEVLHAWTLNFNGRVKIPSKKNFLVAPEK 135
D++TFET P+WN+ L AWTLNF+GRVK+ SKKNFL+ PE+
Sbjct: 665 DLLTFETKKPAWNDELGAWTLNFHGRVKLASKKNFLLVPEQ 705
BLAST of mRNA_E-siliculosus-1a_F_contig10192.182.1 vs. uniprot
Match:
A0A2R5GUZ5_9STRA (Tubby protein-like n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GUZ5_9STRA)
HSP 1 Score: 63.9 bits (154), Expect = 1.250e-10
Identity = 26/44 (59.09%), Postives = 35/44 (79.55%), Query Frame = 1
Query: 1 QEGSDIITFETLSPSWNEVLHAWTLNFNGRVKIPSKKNFLVAPE 132
+E S+++ F+TL P WNE L AWTLNFN RVK+ SKKNF++ P+
Sbjct: 575 EELSELLEFDTLKPQWNEELQAWTLNFNSRVKMASKKNFMLVPQ 618
BLAST of mRNA_E-siliculosus-1a_F_contig10192.182.1 vs. uniprot
Match:
A0A662YJH7_9STRA (PDZ domain-containing protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662YJH7_9STRA)
HSP 1 Score: 63.9 bits (154), Expect = 1.250e-10
Identity = 27/37 (72.97%), Postives = 31/37 (83.78%), Query Frame = 1
Query: 13 DIITFETLSPSWNEVLHAWTLNFNGRVKIPSKKNFLV 123
D++TFET PSWNE L AWTLNF GRVK+ SKKNFL+
Sbjct: 637 DLLTFETKKPSWNETLSAWTLNFQGRVKVASKKNFLL 673
BLAST of mRNA_E-siliculosus-1a_F_contig10192.182.1 vs. uniprot
Match:
A0A6V1UG96_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1UG96_HETAK)
HSP 1 Score: 63.5 bits (153), Expect = 1.690e-10
Identity = 27/40 (67.50%), Postives = 31/40 (77.50%), Query Frame = 1
Query: 13 DIITFETLSPSWNEVLHAWTLNFNGRVKIPSKKNFLVAPE 132
D++ FET P WNE + AWTLNFNGRVKIPSKKNF + E
Sbjct: 330 DLMIFETKRPVWNEQIQAWTLNFNGRVKIPSKKNFFIQAE 369
BLAST of mRNA_E-siliculosus-1a_F_contig10192.182.1 vs. uniprot
Match:
A0A7S1TR98_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TR98_9STRA)
HSP 1 Score: 62.0 bits (149), Expect = 5.970e-10
Identity = 27/41 (65.85%), Postives = 32/41 (78.05%), Query Frame = 1
Query: 13 DIITFETLSPSWNEVLHAWTLNFNGRVKIPSKKNFLVAPEK 135
D++ ET P+W+E L AWTLNF GRVK SKKNFL+APEK
Sbjct: 613 DLLVLETKRPAWSEELKAWTLNFEGRVKRASKKNFLIAPEK 653
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig10192.182.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90 )
Total hits: 25
0 1 Expect = 3.24e-21 / Id = 97.73 Expect = 2.94e-12 / Id = 70.73 Expect = 7.46e-12 / Id = 72.50 Expect = 7.48e-12 / Id = 71.43 Expect = 1.40e-11 / Id = 63.64 Expect = 3.58e-11 / Id = 65.85 Expect = 1.25e-10 / Id = 59.09 Expect = 1.25e-10 / Id = 72.97 Expect = 1.69e-10 / Id = 67.50 Expect = 5.97e-10 / Id = 65.85 Sequence D7G017_ECTSI A0A8K1C842_PYTOL A0A2D4C602_PYTIN A0A836CGA0_9STRA A0A5D6XV38_9STRA K3X577_GLOUD A0A2R5GUZ5_9STRA A0A662YJH7_9STRA A0A6V1UG96_HETAK A0A7S1TR98_9STRA Pages
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Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig10192.182.1
>prot_E-siliculosus-1a_F_contig10192.182.1 ID=prot_E-siliculosus-1a_F_contig10192.182.1|Name=mRNA_E-siliculosus-1a_F_contig10192.182.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=49bp
QEGSDIITFETLSPSWNEVLHAWTLNFNGRVKIPSKKNFLVAPEKVSS* back to top mRNA from alignment at E-siliculosus-1a_F_contig10192:1927..2073+
Legend: CDS polypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_F_contig10192.182.1 ID=mRNA_E-siliculosus-1a_F_contig10192.182.1|Name=mRNA_E-siliculosus-1a_F_contig10192.182.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=147bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig10192:1927..2073+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)CAGGAGGGAAGCGATATCATCACTTTCGAGACCCTCAGCCCGTCTTGGAA
CGAGGTTCTGCACGCCTGGACGCTCAACTTCAACGGTCGCGTCAAGATCC
CGTCTAAGAAGAACTTCCTCGTTGCACCAGAAAAGGTATCATCCTAA back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig10192:1927..2073+
>mRNA_E-siliculosus-1a_F_contig10192.182.1 ID=mRNA_E-siliculosus-1a_F_contig10192.182.1|Name=mRNA_E-siliculosus-1a_F_contig10192.182.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=294bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig10192:1927..2073+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female) back to top