Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1016.164.1 vs. uniprot
Match:
A0A6H5JKJ0_9PHAE (U6 snRNA-associated Sm-like protein LSm1 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKJ0_9PHAE)
HSP 1 Score: 269 bits (687), Expect = 6.220e-84
Identity = 215/254 (84.65%), Postives = 217/254 (85.43%), Query Frame = 3
Query: 165 MADAPKKGSGRVRKPQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXG------QQPQVMVYPQHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRMGLPGMGFQHPIPXXXXXXAFFPGSASLFEQLDKRVMVVLRDGRHLVGVMRSYDQFSNIVLEDTHERHFVRDIFGDISLGLYLVRGDALVLMGELDETREETPRLRRVSADEIIEAQQEASAEERQDAKLDWLFQDLS 908
MADAPKKGSGRVRKPQQ XXXXXXXXXXXXXXXXXXXXXXXXXXXXX QQ QVMVYPQHXXXXXXXXXXXXXXXXXXXXXX RMGLPGMGFQHP+PXXXXXXAFFPGSASLFEQLDKRVMVVLRDGRHLVGVMRSYDQFSNIVLEDTHERHFVRDIFGDISLGLYLVRGDALVLMGELDETREETPRLRRVSADEIIEAQQEASAE+RQDAKLDWLFQDLS
Sbjct: 1 MADAPKKGSGRVRKPQQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAVVGGAGMQNPPPRTHPPNPYPPGQQQQQVMVYPQHXXXXXXXXXXXXXXXXXXXXXX---------RMGLPGMGFQHPLPXXXXXXAFFPGSASLFEQLDKRVMVVLRDGRHLVGVMRSYDQFSNIVLEDTHERHFVRDIFGDISLGLYLVRGDALVLMGELDETREETPRLRRVSADEIIEAQQEASAEDRQDAKLDWLFQDLS 245
BLAST of mRNA_E-siliculosus-1a_F_contig1016.164.1 vs. uniprot
Match:
D8LL00_ECTSI (U6 snRNA-associated Sm-like protein LSm1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL00_ECTSI)
HSP 1 Score: 256 bits (655), Expect = 1.050e-80
Identity = 137/138 (99.28%), Postives = 138/138 (100.00%), Query Frame = 3
Query: 495 MGLPGMGFQHPIPXXXXXXAFFPGSASLFEQLDKRVMVVLRDGRHLVGVMRSYDQFSNIVLEDTHERHFVRDIFGDISLGLYLVRGDALVLMGELDETREETPRLRRVSADEIIEAQQEASAEERQDAKLDWLFQDLS 908
MGLPGMGFQHP+PXXXXXXAFFPGSASLFEQLDKRVMVVLRDGRHLVGVMRSYDQFSNIVLEDTHERHFVRDIFGDISLGLYLVRGDALVLMGELDETREETPRLRRVSADEIIEAQQEASAEERQDAKLDWLFQDLS
Sbjct: 1 MGLPGMGFQHPVPXXXXXXAFFPGSASLFEQLDKRVMVVLRDGRHLVGVMRSYDQFSNIVLEDTHERHFVRDIFGDISLGLYLVRGDALVLMGELDETREETPRLRRVSADEIIEAQQEASAEERQDAKLDWLFQDLS 138
BLAST of mRNA_E-siliculosus-1a_F_contig1016.164.1 vs. uniprot
Match:
A0A835ZG91_9STRA (U6 snRNA-associated Sm-like protein LSm1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZG91_9STRA)
HSP 1 Score: 144 bits (363), Expect = 2.460e-36
Identity = 78/131 (59.54%), Postives = 96/131 (73.28%), Query Frame = 3
Query: 525 PIPXXXXXXAFFPGSASLFEQLDKRVMVVLRDGRHLVGVMRSYDQFSNIVLEDTHERHFVRDIFGDISLGLYLVRGDALVLMGELDETREETPR-----LRRVSADEIIEAQQEASAEERQDAKLDWLFQD 902
P P +FFPG+ASL EQLDK VMVVLRDGRHLVG+MRSYDQFSNIVLEDTHERHFV ++GDI LGLY+VRGD++VL+GE+ L+RV+ADEI++AQQE+ + K++W F D
Sbjct: 107 PXPPVIAPPSFFPGAASLHEQLDKVVMVVLRDGRHLVGLMRSYDQFSNIVLEDTHERHFVGALYGDIPLGLYIVRGDSVVLLGEVAAEXXXXXXXXXALLKRVTADEILQAQQESDVD---PFKVEWDFGD 234
BLAST of mRNA_E-siliculosus-1a_F_contig1016.164.1 vs. uniprot
Match:
A0A7S2XVC4_9STRA (U6 snRNA-associated Sm-like protein LSm1 n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XVC4_9STRA)
HSP 1 Score: 133 bits (335), Expect = 8.350e-34
Identity = 69/115 (60.00%), Postives = 88/115 (76.52%), Query Frame = 3
Query: 555 FFPGSASLFEQLDKRVMVVLRDGRHLVGVMRSYDQFSNIVLEDTHERHFVRDIFGDISLGLYLVRGDALVLMGELDETREETPRL-RRVSADEIIEAQQEASAEERQDAKLDWLF 896
FF G SL EQLDK+++VVLRDGRHLVGV+RS+DQFSN+V+E+THERH V IFGDI LGLY+VRGD +VL+GE+DE +E + + RRVSA+EI+ AQ+ K+ W F
Sbjct: 4 FFAGGMSLVEQLDKKILVVLRDGRHLVGVLRSFDQFSNMVMENTHERHVVEGIFGDIPLGLYIVRGDNVVLLGEVDEEKESSSQHPRRVSAEEILHAQRNTE----DKTKVAWDF 114
BLAST of mRNA_E-siliculosus-1a_F_contig1016.164.1 vs. uniprot
Match:
K3WSU0_GLOUD (U6 snRNA-associated Sm-like protein LSm1 n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WSU0_GLOUD)
HSP 1 Score: 132 bits (332), Expect = 2.530e-33
Identity = 64/115 (55.65%), Postives = 88/115 (76.52%), Query Frame = 3
Query: 555 FFPGSASLFEQLDKRVMVVLRDGRHLVGVMRSYDQFSNIVLEDTHERHFVRDIFGDISLGLYLVRGDALVLMGELDETRE-ETPRLRRVSADEIIEAQQEASAEERQDAKLDWLF 896
+FPGS SL EQLDK+++VVLRDGRHLVG +RS+DQFSNI+LEDT+ERH +F DI LGL ++RGD +VL+GELDE +E + P ++R S +EI+EA++ +A+ + W F
Sbjct: 4 YFPGSISLIEQLDKKILVVLRDGRHLVGYIRSFDQFSNIILEDTYERHVADGMFCDIELGLNIIRGDNIVLLGELDEDKERDQPHMKRASIEEILEAEERLNAKGAASVREQWDF 118
BLAST of mRNA_E-siliculosus-1a_F_contig1016.164.1 vs. uniprot
Match:
A0A6V1WH12_HETAK (U6 snRNA-associated Sm-like protein LSm1 n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1WH12_HETAK)
HSP 1 Score: 126 bits (316), Expect = 4.230e-31
Identity = 63/105 (60.00%), Postives = 82/105 (78.10%), Query Frame = 3
Query: 561 PGSASLFEQLDKRVMVVLRDGRHLVGVMRSYDQFSNIVLEDTHERHFVRDIFGDISLGLYLVRGDALVLMGELDETREETPRLRRVSADEIIEAQQEASAEERQD 875
PG L EQLDKR+++VL+DGRHL+G +RS+DQFSN+V+E+T ERH V +GDI LGLYLVRGDA+VL+GE+D+ E LRRVSADEI+E ++E + R D
Sbjct: 7 PGIMGLVEQLDKRILIVLQDGRHLIGTLRSFDQFSNVVIENTFERHVVDGCYGDIPLGLYLVRGDAVVLLGEVDDAGHEGI-LRRVSADEILELEREKESRARDD 110
BLAST of mRNA_E-siliculosus-1a_F_contig1016.164.1 vs. uniprot
Match:
H3GH42_PHYRM (U6 snRNA-associated Sm-like protein LSm1 n=43 Tax=Peronosporaceae TaxID=4777 RepID=H3GH42_PHYRM)
HSP 1 Score: 124 bits (311), Expect = 2.370e-30
Identity = 58/115 (50.43%), Postives = 86/115 (74.78%), Query Frame = 3
Query: 558 FPGSASLFEQLDKRVMVVLRDGRHLVGVMRSYDQFSNIVLEDTHERHFVRDIFGDISLGLYLVRGDALVLMGELDETRE-ETPRLRRVSADEIIEAQQEASAEERQDAKLDWLFQ 899
FPG++SL +QLDK+V++VLRDGRHLVG +RS+DQ+SNI+LEDT ERH +F DI LGL ++RGD +VL+GELD +E + P ++RV +E++EA+++ + + W F+
Sbjct: 5 FPGNSSLIQQLDKQVLMVLRDGRHLVGYLRSFDQYSNIILEDTFERHVAGGLFCDIELGLNIIRGDNIVLLGELDSEKERDQPHMKRVELEEVLEAEEQLNEAGNTSVRQQWDFE 119
BLAST of mRNA_E-siliculosus-1a_F_contig1016.164.1 vs. uniprot
Match:
A0A7S2CG66_9STRA (U6 snRNA-associated Sm-like protein LSm1 n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CG66_9STRA)
HSP 1 Score: 122 bits (306), Expect = 1.360e-29
Identity = 58/114 (50.88%), Postives = 86/114 (75.44%), Query Frame = 3
Query: 561 PGSASLFEQLDKRVMVVLRDGRHLVGVMRSYDQFSNIVLEDTHERHFVRDIFGDISLGLYLVRGDALVLMGELDETREETPRLRRVSADEIIEAQQEASAEERQDAKLDWLFQD 902
PG+ASL +QLDKR+++VLRDGRHLVG++RS+DQFSN+VLEDTHERH + D++LGL++VRGD +VL+GELD +E + L D ++EA++ ++ K++W F++
Sbjct: 16 PGAASLVDQLDKRILIVLRDGRHLVGILRSFDQFSNMVLEDTHERHVANGLRSDMALGLFIVRGDNIVLLGELDPEKEASSGLIDAEPDVVLEAERNSAF-----TKVEWDFEN 124
BLAST of mRNA_E-siliculosus-1a_F_contig1016.164.1 vs. uniprot
Match:
A0A0P1A9M0_PLAHL (U6 snRNA-associated Sm-like protein LSm1 n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1A9M0_PLAHL)
HSP 1 Score: 121 bits (304), Expect = 2.530e-29
Identity = 59/113 (52.21%), Postives = 85/113 (75.22%), Query Frame = 3
Query: 558 FPGSASLFEQLDKRVMVVLRDGRHLVGVMRSYDQFSNIVLEDTHERHFVRDIFGDISLGLYLVRGDALVLMGELDETRE-ETPRLRRVSADEIIEAQQEASAEERQDAKLDWL 893
FPG++SL +QLDK+V++VLRDGRHLVG +RS+DQFSNI+LEDT+ERH +F DI LGL ++RG +VL+GELD +E + P ++RV +E++EA++ + E L +L
Sbjct: 5 FPGNSSLIQQLDKQVLMVLRDGRHLVGNLRSFDQFSNIILEDTYERHVAGGLFCDIELGLNIIRGGNIVLLGELDSDKERDQPHMKRVKLEEVLEAEERLNEEGNTSLSLSFL 117
BLAST of mRNA_E-siliculosus-1a_F_contig1016.164.1 vs. uniprot
Match:
W4GB80_9STRA (U6 snRNA-associated Sm-like protein LSm1 n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GB80_9STRA)
HSP 1 Score: 121 bits (304), Expect = 2.600e-29
Identity = 63/114 (55.26%), Postives = 85/114 (74.56%), Query Frame = 3
Query: 558 FPGSASLFEQLDKRVMVVLRDGRHLVGVMRSYDQFSNIVLEDTHERHFVRDIFGDISLGLYLVRGDALVLMGELDETRE-ETPRLRRVSADEIIEAQQEASAEERQDAKLDWLF 896
FPG +SL EQLDK+++VVLRDGRHLVG++RS+DQFSNIVLE T ERH V + + DI LGLY++RG+ +VLMGELD+ +E E L R SA+E++ A+ E + + + W F
Sbjct: 7 FPGVSSLVEQLDKQLLVVLRDGRHLVGIIRSFDQFSNIVLEGTCERHVVGNTYCDIPLGLYIIRGENIVLMGELDQAKEAEDVNLTRKSAEEVLTAEMEQNEQGLPTVRDAWNF 120
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1016.164.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90 )
Total hits: 25
0 1 Expect = 6.22e-84 / Id = 84.65 Expect = 1.05e-80 / Id = 99.28 Expect = 2.46e-36 / Id = 59.54 Expect = 8.35e-34 / Id = 60.00 Expect = 2.53e-33 / Id = 55.65 Expect = 4.23e-31 / Id = 60.00 Expect = 2.37e-30 / Id = 50.43 Expect = 1.36e-29 / Id = 50.88 Expect = 2.53e-29 / Id = 52.21 Expect = 2.60e-29 / Id = 55.26 Sequence A0A6H5JKJ0_9PHAE D8LL00_ECTSI A0A835ZG91_9STRA A0A7S2XVC4_9STRA K3WSU0_GLOUD A0A6V1WH12_HETAK H3GH42_PHYRM A0A7S2CG66_9STRA A0A0P1A9M0_PLAHL W4GB80_9STRA Pages
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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name Value
Start 1 Stop 1 Cds size 747 Model size 1538 Exons 4 Ec32 ortholog Ec-11_006170.1 Ec32 ortholog description Sm-like protein LSm1 Hectar predicted targeting category other localisation BRITE ko00000,ko00001,ko00002,ko03009,ko03019 Best eggNOG OG NA|NA|NA Best tax level Eukaryota COG Functional cat. J EggNOG OGs KOG1782@1,KOG1782@2759 EggNOG free text desc. deadenylation-dependent decapping of nuclear-transcribed mRNA GOs GO:0000288,GO:0000290,GO:0000291,GO:0000339,GO:0000375,GO:0000377,GO:0000398,GO:0000932,GO:0000956,GO:0001101,GO:0003674,GO:0003676,GO:0003682,GO:0003723,GO:0003729,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005829,GO:0005845,GO:0006139,GO:0006396,GO:0006397,GO:0006401,GO:0006402,GO:0006725,GO:0006807,GO:0006950,GO:0006970,GO:0006972,GO:0006996,GO:0007275,GO:0007399,GO:0008150,GO:0008152,GO:0008334,GO:0008380,GO:0009056,GO:0009057,GO:0009266,GO:0009409,GO:0009414,GO:0009415,GO:0009628,GO:0009631,GO:0009651,GO:0009892,GO:0009987,GO:0010035,GO:0010467,GO:0010468,GO:0010494,GO:0010605,GO:0010629,GO:0010721,GO:0016043,GO:0016070,GO:0016071,GO:0019222,GO:0019439,GO:0019827,GO:0022008,GO:0022607,GO:0022613,GO:0022618,GO:0030154,GO:0030424,GO:0030425,GO:0032501,GO:0032502,GO:0032991,GO:0033962,GO:0034518,GO:0034622,GO:0034641,GO:0034655,GO:0035770,GO:0036002,GO:0036464,GO:0036477,GO:0042221,GO:0042538,GO:0042995,GO:0043005,GO:0043025,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043928,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0044297,GO:0044424,GO:0044444,GO:0044463,GO:0044464,GO:0045595,GO:0045596,GO:0045664,GO:0045665,GO:0046483,GO:0046700,GO:0048519,GO:0048523,GO:0048699,GO:0048731,GO:0048856,GO:0048869,GO:0050767,GO:0050768,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0051093,GO:0051239,GO:0051241,GO:0051960,GO:0051961,GO:0060255,GO:0060284,GO:0065003,GO:0065007,GO:0070925,GO:0071044,GO:0071704,GO:0071826,GO:0071840,GO:0090304,GO:0097159,GO:0097447,GO:0097458,GO:0098727,GO:0120025,GO:0120038,GO:0120114,GO:1901360,GO:1901361,GO:1901363,GO:1901575,GO:1901700,GO:1990124,GO:1990726,GO:1990904,GO:2000026 KEGG Module M00146,M00397 KEGG Pathway ko00190,ko01100,ko03018,ko04714,ko04723,ko04913,ko04925,ko04927,ko04932,ko04934,ko04979,ko05010,ko05012,ko05016,map00190,map01100,map03018,map04714,map04723,map04913,map04925,map04927,map04932,map04934,map04979,map05010,map05012,map05016 KEGG TC 3.D.1.6 KEGG ko ko:K03952,ko:K12620,ko:K14794,ko:K16931 Preferred name LSM1 Seed eggNOG ortholog 2880.D8LL00 Seed ortholog evalue 3e-67 Seed ortholog score 261.9 Taxonomic scope Eukaryota
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig1016.164.1
>prot_E-siliculosus-1a_F_contig1016.164.1 ID=prot_E-siliculosus-1a_F_contig1016.164.1|Name=mRNA_E-siliculosus-1a_F_contig1016.164.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=249bp
MADAPKKGSGRVRKPQQQQQQQQQQRPQAPQGGAAGAPRGARAAVVGGAG back to top mRNA from alignment at E-siliculosus-1a_F_contig1016:31162..34582-
Legend: UTR polypeptide CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_F_contig1016.164.1 ID=mRNA_E-siliculosus-1a_F_contig1016.164.1|Name=mRNA_E-siliculosus-1a_F_contig1016.164.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=3421bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1016:31162..34582- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)CGCTGCCTTCTGGTCGTCCGCCGTGTTGTAGAAGCTATCAG GTGCGTTAA
CGTGTCGTCGTAGCATGGCATTGGTGTATTATTGTGCTCGTAGGTGAAGC
AGAGGGGTGACGTCGGCACACCCAAAATCTTCTCCTAATCCCTGTTGAGC
GTTTTGGAAAACAGCTCTTGAAAAGGTACGAAGCGGTGTGTGCTGCCTCG
CTGCTCTCCGAGATATTCATATTGTTGTCAAGCATGTTATGTATACCAAC
ACGTGGGGTAGCTGTTTCTGTTGCTTGTTACTGACTGAGGCATTTTCCGG
TCGGTGCCACTGCGTTACTGCTTCACAAGCACATGGTCGTTATCTGCCCG
ATGACATCATATGGACGTGTTCGTCTCTCGCTGCGGTTCAGCTGATGCCG
CAGCGACACCGGTCGACTGCACGTGTTGCACACTTACGACTAACTGCTGT
AGGAACACAACGGGATCGTACCTCCCGCGCTGCTGATGTGATGATGACGC
TGCAGTTACAACAGTAGATATCAAGTACCGCTGTAAAAACAAACGGCTGT
CTGTGGCAAAATAATCCTCTACTCCAGCCGGTGTCCCTCCACTCACTGAA
GAGACTTCAGCACATCCCTTTCGACTACTGCTCTGTTATATCTCGAACAG
GTAGTCTTTCTGTGTTCATGTATATTTCCAATAGTCCTCTTGTGTCGGCG
AACGGTGTACGGACTGCAATACGCATACACCCTGCTTTCCCGAGAGAGCG
AGGTACGCTGAACCCATCGTGATGTCGCTCCTCAAAACGTGTCGTGCCTT
GCAACCATGCCGAATCTCTCCCAGAGCGAAGCAGCTGTCGAACAAGTGAC
CAACAGCAGGGGCGCGGCTTTTGGCGGTGGCGCGGGCTGGCGAGGAGGAC
ATATTAGTCCACCACATCGCAATTTAGTCGGCACGACTTCCTTAGCC ATG
GCGGATGCTCCTAAGAAAGGCTCCGGCAGGGTTCGAAAGCCACAGCAGCA
GCAGCAGCAGCAGCAGCAGCAGCGCCCACAAGCACCACAAGGGGGAGCGG
CCGGCGCACCGAGAGGGGCGAGGGCCGCGGTAGTTGGAGGGGCAGGGATG
CAACCCCCCCCTCCTAGAACACACCCACCTAATCCCCCCCCCCCCGGGCA
GCAGCCGCAGGTAATGGTGTACCCCCAACACCCCCAGCACCATCTACAAC
AACACCAACAACACCAACAACACCAACAACACCAACAGCATCCGCAGCAT
CCCCAGCATCCCCAGCACCCGCAACGGATGGGGCTCCCTGGGATGGGCTT
TCAGCACCCCATACCGCCCCCGCCACCACCCCCGGCGTTTTTTCCTGGGT
CGGCGAGTCTGTTCGAGCAGCTCGACAAGCGGGTCATG GTGGGTACTTGA
TACGGGGAGACAGGGGTAGAGCTGCATGTGTAAGTGTCCTCACCTGTTGT
AGAGCGATATGGTCCTTTCAACTGCAGTCAAGCCTTCTCAGTCCTGGCAT
TGAGCCTCGATTGTTTCATGGTCCACGCACCTCCCGCTGCACTACTGTTC
TACTGTACAGGAGGGTGTGTTCCCTTTGTTGTCTACGAGCCCGCGGTATA
GCAGCAGGCGAAGTGGTGCTGCTGTTATGCCCAGCCGCAACAATGCCGCA
AAAGTCTGGTAGATCACGCTTGCAACCGTTGCCGACGAGGATGTTCAAGA
ACTCCCTCCCGAACGGAGTTGCATTGACGACGCGATGCTGTTTGTGCGTA
CCTCAGGGGGGGGGATTCTTTGTTCATGCGTTGGACGTTTGTGTTCGTTT
TAAGGATACGGCGTTGATGAGGATGAAAGTGATGGATGGCGGCTTGTAGA
TAGTTAAACCCAACAATAATCACAACACCCCGCACCAACGACAACAGGTC
GTTCTTCGCGACGGTAGGCACCTGGTGGGAGTTATGAGAAGCTACGACCA
GTTTTCCAACATCGTGCTGGAAGACACGCACGAACGACACTTTGTGAGAG
GTGAGCTTCAGCAAACTCTTACACAAAGCCATGTGTCTGGTCGGAAATGT
TCATCCGCTCGACGTTGTTCTCCCCCACCAATGTGTTTTGCGTGACACGT
CCTTCGTGCTCGCGTGTACTCGAAAGCTCGTGCTGCGTTGTCATCAGCCG
AGACTATTCCGCTGTTTTCACGAGTGACCCGGGCGGACCCCGTAATTAAT
TCATGATCCTGACCCTTTGGAAATCACGTACCATGGTATTTTATGTATCT
TGAGAAGCTGTGCGCAGAAGAATGGTTGACTGCAAGAGATGTTCTTTGGA
TCGCTTCGAGCATTCTCCAACATAAGTTGCTCAGTCAATTTCAACAGCAG
TCGTCCCGTTTAGAGACACCGTCATGGCAATCCGGACCAGGAGTCCCGGT
CAGAGTATTTTTGTTTTGAGCCGAAGTTTTTCACCGGGGAACATTCATCG
GTATTGCAGCACGTATCCAAACGGGTAGGCGCGATGCACTTTAGTTCGAG
CGTTGGTTTTGCCGTCTCGTCCGAAATGTCCTCGTACAGCTGCATGCGCC
AACGCTCCCCACTCGTACCCGCCACCCGGTTGGTGCCGCAGATATTTTCG
GGGATATATCGCTTGGGCTTTACCTTGTCCGAGGGGATGCTCTGGTGTTG
ATGGGGGAACTCGACGAGACCCGGGAGGAAACTCCCAGGCTGAGAAGGGT
CTCCGCGGACGAGATAATCGAGGCGCAGCAGGAGGCATCGGCAGAGGAGC
GCCAAGACGCGAAGCTAGACTGGTTGTTCCAGGACTTGTCGTGA TTGTGA
TGTCGTGCGCTTTTCGTCTCTCCACCCGCTGGTGCTGGCTGTATTTCCAA
CCTCTAGACCAACGCGGGCACCGATGGTTTACACAATTGTTTTGGAAGAT
GCGTTGCTGATGTGATGGTTTGATGCTGCTGCGGTCTTTGTGCCAAAACT
TGCAGCGCTCTGGCTTCCTCTCGTTTGTGTCCGGGCCTGTTGCTAGCGCA
AGTCGCGTCTCTGGAAGGATGAGGAAATAATGAAGTGGTTACAGGGGGGT
GATTGTATGGAAACAGGCAAGTAGCGGCTGACCCTTGGATGCCCTGTTGA
AGGAGTACTGTGGTGCAGTCATTGTCCAGTGTTGAAAATATAGGCAGCCC
TTTTGTGATATGTTGGTCGGGTTGCGCAGAGCGGACAATCGAAGTCGTCT
GCGTCCACCCGGTGTTTGGGACGTGTTTTTCGACTTGGGGAACCTGTCGG
GAACAATAGTTTGCTCATTCAGTGATACAAGTGTATACTGTAGATTGATA
TCAAAATCCGTCAACCAGAGTGTCCATTCAAAAAACGATTGCCGATACGG
GGATGGGTTGGCCGATATGGGCTCTAAATGCGACATACAAGCATGCAACG
TAGAGACTCCGAAGCACTGAC back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1016:31162..34582-
>mRNA_E-siliculosus-1a_F_contig1016.164.1 ID=mRNA_E-siliculosus-1a_F_contig1016.164.1|Name=mRNA_E-siliculosus-1a_F_contig1016.164.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=1494bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1016:31162..34582- (Ectocarpus siliculosus Ec863f_EcPH12_90f female) back to top