prot_E-siliculosus-1a_F_contig1016.164.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female
You are viewing a polypeptide, more information available on the corresponding mRNA page
Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1016.164.1 vs. uniprot
Match: A0A6H5JKJ0_9PHAE (U6 snRNA-associated Sm-like protein LSm1 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKJ0_9PHAE) HSP 1 Score: 269 bits (688), Expect = 7.980e-88 Identity = 216/254 (85.04%), Postives = 218/254 (85.83%), Query Frame = 0 Query: 1 MADAPKKGSGRVRKPQQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXG------QQPQVMVYPQHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRMGLPGMGFQHPIPXXXXXXAFFPGSASLFEQLDKRVMVVLRDGRHLVGVMRSYDQFSNIVLEDTHERHFVRDIFGDISLGLYLVRGDALVLMGELDETREETPRLRRVSADEIIEAQQEASAEERQDAKLDWLFQDLS 248 MADAPKKGSGRVRKPQQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXX QQ QVMVYPQHXXXXXXXXXXXXXXXXXXXXXX RMGLPGMGFQHP+PXXXXXXAFFPGSASLFEQLDKRVMVVLRDGRHLVGVMRSYDQFSNIVLEDTHERHFVRDIFGDISLGLYLVRGDALVLMGELDETREETPRLRRVSADEIIEAQQEASAE+RQDAKLDWLFQDLS Sbjct: 1 MADAPKKGSGRVRKPQQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAVVGGAGMQNPPPRTHPPNPYPPGQQQQQVMVYPQHXXXXXXXXXXXXXXXXXXXXXX---------RMGLPGMGFQHPLPXXXXXXAFFPGSASLFEQLDKRVMVVLRDGRHLVGVMRSYDQFSNIVLEDTHERHFVRDIFGDISLGLYLVRGDALVLMGELDETREETPRLRRVSADEIIEAQQEASAEDRQDAKLDWLFQDLS 245
BLAST of mRNA_E-siliculosus-1a_F_contig1016.164.1 vs. uniprot
Match: D8LL00_ECTSI (U6 snRNA-associated Sm-like protein LSm1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL00_ECTSI) HSP 1 Score: 256 bits (653), Expect = 4.480e-84 Identity = 137/138 (99.28%), Postives = 138/138 (100.00%), Query Frame = 0 Query: 111 MGLPGMGFQHPIPXXXXXXAFFPGSASLFEQLDKRVMVVLRDGRHLVGVMRSYDQFSNIVLEDTHERHFVRDIFGDISLGLYLVRGDALVLMGELDETREETPRLRRVSADEIIEAQQEASAEERQDAKLDWLFQDLS 248 MGLPGMGFQHP+PXXXXXXAFFPGSASLFEQLDKRVMVVLRDGRHLVGVMRSYDQFSNIVLEDTHERHFVRDIFGDISLGLYLVRGDALVLMGELDETREETPRLRRVSADEIIEAQQEASAEERQDAKLDWLFQDLS Sbjct: 1 MGLPGMGFQHPVPXXXXXXAFFPGSASLFEQLDKRVMVVLRDGRHLVGVMRSYDQFSNIVLEDTHERHFVRDIFGDISLGLYLVRGDALVLMGELDETREETPRLRRVSADEIIEAQQEASAEERQDAKLDWLFQDLS 138
BLAST of mRNA_E-siliculosus-1a_F_contig1016.164.1 vs. uniprot
Match: A0A835ZG91_9STRA (U6 snRNA-associated Sm-like protein LSm1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZG91_9STRA) HSP 1 Score: 143 bits (361), Expect = 1.330e-38 Identity = 78/131 (59.54%), Postives = 96/131 (73.28%), Query Frame = 0 Query: 121 PIPXXXXXXAFFPGSASLFEQLDKRVMVVLRDGRHLVGVMRSYDQFSNIVLEDTHERHFVRDIFGDISLGLYLVRGDALVLMGELDETREETPR-----LRRVSADEIIEAQQEASAEERQDAKLDWLFQD 246 P P +FFPG+ASL EQLDK VMVVLRDGRHLVG+MRSYDQFSNIVLEDTHERHFV ++GDI LGLY+VRGD++VL+GE+ L+RV+ADEI++AQQE+ + K++W F D Sbjct: 107 PXPPVIAPPSFFPGAASLHEQLDKVVMVVLRDGRHLVGLMRSYDQFSNIVLEDTHERHFVGALYGDIPLGLYIVRGDSVVLLGEVAAEXXXXXXXXXALLKRVTADEILQAQQESDVDP---FKVEWDFGD 234
BLAST of mRNA_E-siliculosus-1a_F_contig1016.164.1 vs. uniprot
Match: A0A7S2XVC4_9STRA (U6 snRNA-associated Sm-like protein LSm1 n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XVC4_9STRA) HSP 1 Score: 133 bits (335), Expect = 3.580e-36 Identity = 70/115 (60.87%), Postives = 92/115 (80.00%), Query Frame = 0 Query: 131 FFPGSASLFEQLDKRVMVVLRDGRHLVGVMRSYDQFSNIVLEDTHERHFVRDIFGDISLGLYLVRGDALVLMGELDETREETPRL-RRVSADEIIEAQQEASAEERQDAKLDWLF 244 FF G SL EQLDK+++VVLRDGRHLVGV+RS+DQFSN+V+E+THERH V IFGDI LGLY+VRGD +VL+GE+DE +E + + RRVSA+EI+ AQ+ + E++ K+ W F Sbjct: 4 FFAGGMSLVEQLDKKILVVLRDGRHLVGVLRSFDQFSNMVMENTHERHVVEGIFGDIPLGLYIVRGDNVVLLGEVDEEKESSSQHPRRVSAEEILHAQR--NTEDK--TKVAWDF 114
BLAST of mRNA_E-siliculosus-1a_F_contig1016.164.1 vs. uniprot
Match: K3WSU0_GLOUD (U6 snRNA-associated Sm-like protein LSm1 n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WSU0_GLOUD) HSP 1 Score: 132 bits (331), Expect = 1.610e-35 Identity = 64/115 (55.65%), Postives = 88/115 (76.52%), Query Frame = 0 Query: 131 FFPGSASLFEQLDKRVMVVLRDGRHLVGVMRSYDQFSNIVLEDTHERHFVRDIFGDISLGLYLVRGDALVLMGELDETRE-ETPRLRRVSADEIIEAQQEASAEERQDAKLDWLF 244 +FPGS SL EQLDK+++VVLRDGRHLVG +RS+DQFSNI+LEDT+ERH +F DI LGL ++RGD +VL+GELDE +E + P ++R S +EI+EA++ +A+ + W F Sbjct: 4 YFPGSISLIEQLDKKILVVLRDGRHLVGYIRSFDQFSNIILEDTYERHVADGMFCDIELGLNIIRGDNIVLLGELDEDKERDQPHMKRASIEEILEAEERLNAKGAASVREQWDF 118
BLAST of mRNA_E-siliculosus-1a_F_contig1016.164.1 vs. uniprot
Match: A0A6V1WH12_HETAK (U6 snRNA-associated Sm-like protein LSm1 n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1WH12_HETAK) HSP 1 Score: 125 bits (315), Expect = 3.610e-33 Identity = 65/112 (58.04%), Postives = 85/112 (75.89%), Query Frame = 0 Query: 133 PGSASLFEQLDKRVMVVLRDGRHLVGVMRSYDQFSNIVLEDTHERHFVRDIFGDISLGLYLVRGDALVLMGELDETREETPRLRRVSADEIIEAQQEASAEERQDAKLDWLF 244 PG L EQLDKR+++VL+DGRHL+G +RS+DQFSN+V+E+T ERH V +GDI LGLYLVRGDA+VL+GE+D+ E LRRVSADEI+E ++E + A+ DW F Sbjct: 7 PGIMGLVEQLDKRILIVLQDGRHLIGTLRSFDQFSNVVIENTFERHVVDGCYGDIPLGLYLVRGDAVVLLGEVDDAGHEGI-LRRVSADEILELEREKESR----ARDDWDF 113
BLAST of mRNA_E-siliculosus-1a_F_contig1016.164.1 vs. uniprot
Match: H3GH42_PHYRM (U6 snRNA-associated Sm-like protein LSm1 n=43 Tax=Peronosporaceae TaxID=4777 RepID=H3GH42_PHYRM) HSP 1 Score: 123 bits (309), Expect = 3.130e-32 Identity = 58/115 (50.43%), Postives = 86/115 (74.78%), Query Frame = 0 Query: 132 FPGSASLFEQLDKRVMVVLRDGRHLVGVMRSYDQFSNIVLEDTHERHFVRDIFGDISLGLYLVRGDALVLMGELDETRE-ETPRLRRVSADEIIEAQQEASAEERQDAKLDWLFQ 245 FPG++SL +QLDK+V++VLRDGRHLVG +RS+DQ+SNI+LEDT ERH +F DI LGL ++RGD +VL+GELD +E + P ++RV +E++EA+++ + + W F+ Sbjct: 5 FPGNSSLIQQLDKQVLMVLRDGRHLVGYLRSFDQYSNIILEDTFERHVAGGLFCDIELGLNIIRGDNIVLLGELDSEKERDQPHMKRVELEEVLEAEEQLNEAGNTSVRQQWDFE 119
BLAST of mRNA_E-siliculosus-1a_F_contig1016.164.1 vs. uniprot
Match: A0A7S2CG66_9STRA (U6 snRNA-associated Sm-like protein LSm1 n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CG66_9STRA) HSP 1 Score: 122 bits (305), Expect = 1.400e-31 Identity = 58/113 (51.33%), Postives = 85/113 (75.22%), Query Frame = 0 Query: 133 PGSASLFEQLDKRVMVVLRDGRHLVGVMRSYDQFSNIVLEDTHERHFVRDIFGDISLGLYLVRGDALVLMGELDETREETPRLRRVSADEIIEAQQEASAEERQDAKLDWLFQ 245 PG+ASL +QLDKR+++VLRDGRHLVG++RS+DQFSN+VLEDTHERH + D++LGL++VRGD +VL+GELD +E + L D ++EA++ ++ K++W F+ Sbjct: 16 PGAASLVDQLDKRILIVLRDGRHLVGILRSFDQFSNMVLEDTHERHVANGLRSDMALGLFIVRGDNIVLLGELDPEKEASSGLIDAEPDVVLEAERNSAF-----TKVEWDFE 123
BLAST of mRNA_E-siliculosus-1a_F_contig1016.164.1 vs. uniprot
Match: A0A0P1A9M0_PLAHL (U6 snRNA-associated Sm-like protein LSm1 n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1A9M0_PLAHL) HSP 1 Score: 121 bits (303), Expect = 2.710e-31 Identity = 59/113 (52.21%), Postives = 85/113 (75.22%), Query Frame = 0 Query: 132 FPGSASLFEQLDKRVMVVLRDGRHLVGVMRSYDQFSNIVLEDTHERHFVRDIFGDISLGLYLVRGDALVLMGELDETRE-ETPRLRRVSADEIIEAQQEASAEERQDAKLDWL 243 FPG++SL +QLDK+V++VLRDGRHLVG +RS+DQFSNI+LEDT+ERH +F DI LGL ++RG +VL+GELD +E + P ++RV +E++EA++ + E L +L Sbjct: 5 FPGNSSLIQQLDKQVLMVLRDGRHLVGNLRSFDQFSNIILEDTYERHVAGGLFCDIELGLNIIRGGNIVLLGELDSDKERDQPHMKRVKLEEVLEAEERLNEEGNTSLSLSFL 117
BLAST of mRNA_E-siliculosus-1a_F_contig1016.164.1 vs. uniprot
Match: W4GB80_9STRA (U6 snRNA-associated Sm-like protein LSm1 n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GB80_9STRA) HSP 1 Score: 121 bits (303), Expect = 2.790e-31 Identity = 63/114 (55.26%), Postives = 85/114 (74.56%), Query Frame = 0 Query: 132 FPGSASLFEQLDKRVMVVLRDGRHLVGVMRSYDQFSNIVLEDTHERHFVRDIFGDISLGLYLVRGDALVLMGELDETRE-ETPRLRRVSADEIIEAQQEASAEERQDAKLDWLF 244 FPG +SL EQLDK+++VVLRDGRHLVG++RS+DQFSNIVLE T ERH V + + DI LGLY++RG+ +VLMGELD+ +E E L R SA+E++ A+ E + + + W F Sbjct: 7 FPGVSSLVEQLDKQLLVVLRDGRHLVGIIRSFDQFSNIVLEGTCERHVVGNTYCDIPLGLYIIRGENIVLMGELDQAKEAEDVNLTRKSAEEVLTAEMEQNEQGLPTVRDAWNF 120 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1016.164.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29 ZOOMx 1POSITION0
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_E-siliculosus-1a_F_contig1016.164.1 ID=prot_E-siliculosus-1a_F_contig1016.164.1|Name=mRNA_E-siliculosus-1a_F_contig1016.164.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=249bpback to top |