mRNA_E-siliculosus-1a_F_contig10134.141.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Homology

BLAST of mRNA_E-siliculosus-1a_F_contig10134.141.1 vs. uniprot
Match: E6ZER2_ECTSI (NADH-ubiquinone oxidoreductase, subunit 4L n=85 Tax=Phaeophyceae TaxID=2870 RepID=E6ZER2_ECTSI)

HSP 1 Score: 174 bits (440), Expect = 1.170e-54
Identity = 98/100 (98.00%), Postives = 100/100 (100.00%), Query Frame = 1

Query:    1 MDFIHFFFVSTLLFIIGVGGVILNRTNIVVVLMSLELALLSVSLNFIIFSACLGDLTGQIFAIFILVIAACESSIGLAIILVYFRVRGSIRIDQASLLKS 300
            MDFIHFFFVSTLLF+IGVGGVILNRTNIVVVLMSLELALLSVSLNFIIFSACLGDLTGQIFAIFILVIAACESS+GLAIILVYFRVRGSIRIDQASLLKS
Sbjct:    1 MDFIHFFFVSTLLFVIGVGGVILNRTNIVVVLMSLELALLSVSLNFIIFSACLGDLTGQIFAIFILVIAACESSVGLAIILVYFRVRGSIRIDQASLLKS 100

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BLAST of mRNA_E-siliculosus-1a_F_contig10134.141.1 vs. uniprot
Match: Q94Z11_PYLLI (NADH dehydrogenase subunit 4L n=1 Tax=Pylaiella littoralis TaxID=2885 RepID=Q94Z11_PYLLI)

HSP 1 Score: 160 bits (406), Expect = 1.790e-49
Identity = 92/100 (92.00%), Postives = 96/100 (96.00%), Query Frame = 1

Query:    1 MDFIHFFFVSTLLFIIGVGGVILNRTNIVVVLMSLELALLSVSLNFIIFSACLGDLTGQIFAIFILVIAACESSIGLAIILVYFRVRGSIRIDQASLLKS 300
            M FIHFF++STLLFIIGVGGVI NRTNIVVVLMSLELALLSVSLNFIIFS CL DLTGQIFAIFILVIAACESSIGLAIILV+FRVRGSIR+DQASLLKS
Sbjct:    1 MYFIHFFYLSTLLFIIGVGGVIFNRTNIVVVLMSLELALLSVSLNFIIFSVCLDDLTGQIFAIFILVIAACESSIGLAIILVFFRVRGSIRLDQASLLKS 100

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BLAST of mRNA_E-siliculosus-1a_F_contig10134.141.1 vs. uniprot
Match: A0A1L2F1H7_9PHAE (Nad4L n=1 Tax=Coccophora langsdorfii TaxID=74099 RepID=A0A1L2F1H7_9PHAE)

HSP 1 Score: 145 bits (367), Expect = 1.630e-43
Identity = 85/101 (84.16%), Postives = 91/101 (90.10%), Query Frame = 1

Query:    1 MDFIHFFFVSTLLFIIGV-GGVILNRTNIVVVLMSLELALLSVSLNFIIFSACLGDLTGQIFAIFILVIAACESSIGLAIILVYFRVRGSIRIDQASLLKS 300
            MDFIHFFF     +++ V GGV+LNRTNIVVVLMSLELALLSVSLNFIIFS CL DL GQIFAIFIL++AACESSIGLAIILVYFRVRGSIRIDQASLLKS
Sbjct:    1 MDFIHFFFSYPFYYLLLVWGGVVLNRTNIVVVLMSLELALLSVSLNFIIFSVCLADLIGQIFAIFILIVAACESSIGLAIILVYFRVRGSIRIDQASLLKS 101

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BLAST of mRNA_E-siliculosus-1a_F_contig10134.141.1 vs. uniprot
Match: A0A8E8PEE6_9PHAE (Nad4L n=1 Tax=Phaeophyceae sp. TaxID=2249243 RepID=A0A8E8PEE6_9PHAE)

HSP 1 Score: 144 bits (363), Expect = 6.440e-43
Identity = 79/100 (79.00%), Postives = 92/100 (92.00%), Query Frame = 1

Query:    1 MDFIHFFFVSTLLFIIGVGGVILNRTNIVVVLMSLELALLSVSLNFIIFSACLGDLTGQIFAIFILVIAACESSIGLAIILVYFRVRGSIRIDQASLLKS 300
            MD+I+ FF+S+L +I+GV GV+ N+TNIVV+LMSLELALL VSL F+IFS CLGDL GQIFAI+ILVIAACESSIGLAIILVYFRV+GSIR+DQASLLKS
Sbjct:    1 MDYIYLFFISSLFYILGVLGVLFNKTNIVVILMSLELALLGVSLGFLIFSVCLGDLQGQIFAIYILVIAACESSIGLAIILVYFRVKGSIRLDQASLLKS 100

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BLAST of mRNA_E-siliculosus-1a_F_contig10134.141.1 vs. uniprot
Match: Q2TUC4_DICDH (NADH dehydrogenase subunit 4L n=1 Tax=Dictyota dichotoma TaxID=2876 RepID=Q2TUC4_DICDH)

HSP 1 Score: 131 bits (330), Expect = 6.880e-38
Identity = 73/100 (73.00%), Postives = 87/100 (87.00%), Query Frame = 1

Query:    1 MDFIHFFFVSTLLFIIGVGGVILNRTNIVVVLMSLELALLSVSLNFIIFSACLGDLTGQIFAIFILVIAACESSIGLAIILVYFRVRGSIRIDQASLLKS 300
            M  +   +V++L+F IGVGGVILNRTNI+ +LMSLE++L S+SLNF+IFS  L D+ GQIFA+FIL IAACESSIGLAIILVY+RVRGSIRIDQASLLKS
Sbjct:    1 MPILQLSYVTSLMFFIGVGGVILNRTNILAILMSLEISLFSISLNFLIFSVYLDDMIGQIFALFILTIAACESSIGLAIILVYYRVRGSIRIDQASLLKS 100

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BLAST of mRNA_E-siliculosus-1a_F_contig10134.141.1 vs. uniprot
Match: A0A8F0FEY2_9PHAE (NADH dehydrogenase subunit 4L n=1 Tax=Protohalopteris sp. TaxID=2843287 RepID=A0A8F0FEY2_9PHAE)

HSP 1 Score: 130 bits (327), Expect = 1.970e-37
Identity = 70/93 (75.27%), Postives = 84/93 (90.32%), Query Frame = 1

Query:   22 FVSTLLFIIGVGGVILNRTNIVVVLMSLELALLSVSLNFIIFSACLGDLTGQIFAIFILVIAACESSIGLAIILVYFRVRGSIRIDQASLLKS 300
            FV +L+F IGVGGV+LNRTNI+ +LMSLE+AL SVSLNF+IFS  L D+ GQIFA+FIL +AACESS+GLAIILVY+RVRGSIR+DQA+LLKS
Sbjct:    8 FVISLMFFIGVGGVVLNRTNILAILMSLEIALFSVSLNFLIFSVYLDDIMGQIFAVFILAVAACESSVGLAIILVYYRVRGSIRVDQAALLKS 100

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BLAST of mRNA_E-siliculosus-1a_F_contig10134.141.1 vs. uniprot
Match: A0A4Y5T8D2_9PHAE (NADH dehydrogenase subunit 4L n=1 Tax=Dictyopteris divaricata TaxID=156996 RepID=A0A4Y5T8D2_9PHAE)

HSP 1 Score: 127 bits (318), Expect = 4.630e-36
Identity = 67/100 (67.00%), Postives = 85/100 (85.00%), Query Frame = 1

Query:    1 MDFIHFFFVSTLLFIIGVGGVILNRTNIVVVLMSLELALLSVSLNFIIFSACLGDLTGQIFAIFILVIAACESSIGLAIILVYFRVRGSIRIDQASLLKS 300
            M  +   ++++L+F IG+ GV+ NRTNI+ VLMSLE++L S+SLNF+IFS  L D+ GQIFA+FIL +AACESSIGLAIILVY+RVRGSIR+DQASLLKS
Sbjct:    1 MSIVQLSYITSLMFFIGIAGVVFNRTNILAVLMSLEISLFSISLNFLIFSVYLDDIIGQIFALFILTVAACESSIGLAIILVYYRVRGSIRVDQASLLKS 100

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BLAST of mRNA_E-siliculosus-1a_F_contig10134.141.1 vs. uniprot
Match: A0A7S6ZPE7_9STRA (Nad4L n=1 Tax=Schizocladia ischiensis TaxID=196139 RepID=A0A7S6ZPE7_9STRA)

HSP 1 Score: 114 bits (285), Expect = 4.900e-31
Identity = 56/100 (56.00%), Postives = 84/100 (84.00%), Query Frame = 1

Query:    1 MDFIHFFFVSTLLFIIGVGGVILNRTNIVVVLMSLELALLSVSLNFIIFSACLGDLTGQIFAIFILVIAACESSIGLAIILVYFRVRGSIRIDQASLLKS 300
            M+F+ F  ++T +F +G+GG++LNRTNI+++LMS+E++LL++ LNF+I S  L D+ GQ+F +FIL +A CESSIGLAIIL Y+RVRG IR+++ASL+K+
Sbjct:    1 MEFLQFCLLTTAMFFLGIGGIVLNRTNILILLMSIEVSLLALGLNFLILSVYLDDILGQVFCLFILTVAGCESSIGLAIILAYYRVRGRIRMNEASLMKA 100

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BLAST of mRNA_E-siliculosus-1a_F_contig10134.141.1 vs. uniprot
Match: UPI001A9736EA (NADH-quinone oxidoreductase subunit NuoK n=2 Tax=Acetobacteraceae TaxID=433 RepID=UPI001A9736EA)

HSP 1 Score: 111 bits (277), Expect = 8.820e-30
Identity = 59/95 (62.11%), Postives = 78/95 (82.11%), Query Frame = 1

Query:   13 HFFFVSTLLFIIGVGGVILNRTNIVVVLMSLELALLSVSLNFIIFSACLGDLTGQIFAIFILVIAACESSIGLAIILVYFRVRGSIRIDQASLLK 297
            H+  VS +LF++GV G+ LNR NI+V+LMS+EL LLSV+LNF+ FSA L DLTGQIFA+F+L +AA E++IGLAI+++YFR RGSI +D  S LK
Sbjct:    8 HYLTVSAILFVLGVLGIFLNRKNIIVILMSVELILLSVNLNFVAFSATLQDLTGQIFAMFVLTVAAAEAAIGLAILVIYFRNRGSIEVDNVSTLK 102

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BLAST of mRNA_E-siliculosus-1a_F_contig10134.141.1 vs. uniprot
Match: A0A1Z8KZX0_9PROT (NADH-quinone oxidoreductase subunit K n=2 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A1Z8KZX0_9PROT)

HSP 1 Score: 109 bits (273), Expect = 3.480e-29
Identity = 57/96 (59.38%), Postives = 79/96 (82.29%), Query Frame = 1

Query:   10 IHFFFVSTLLFIIGVGGVILNRTNIVVVLMSLELALLSVSLNFIIFSACLGDLTGQIFAIFILVIAACESSIGLAIILVYFRVRGSIRIDQASLLK 297
            IH+  VS +LF +GV G+  NR N++V+LMS+EL LLSV++NF+ FSA LGDLTGQ+FA+FIL +AA E++IGLAI++VYFR RGSI ++  S++K
Sbjct:    6 IHYLVVSAILFTLGVIGIFANRRNVIVILMSIELILLSVNINFVAFSAYLGDLTGQVFAMFILTVAAAEAAIGLAILVVYFRNRGSIAVEDISMMK 101

The following BLAST results are available for this feature:

BLAST of mRNA_E-siliculosus-1a_F_contig10134.141.1 vs. uniprot

BLAST of mRNA_E-siliculosus-1a_F_contig10134.141.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25

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POSITION

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Match Name	E-value	Identity	Description
E6ZER2_ECTSI	1.170e-54	98.00	NADH-ubiquinone oxidoreductase, subunit 4L n=85 Ta...	[more]
Q94Z11_PYLLI	1.790e-49	92.00	NADH dehydrogenase subunit 4L n=1 Tax=Pylaiella li...	[more]
A0A1L2F1H7_9PHAE	1.630e-43	84.16	Nad4L n=1 Tax=Coccophora langsdorfii TaxID=74099 R...	[more]
A0A8E8PEE6_9PHAE	6.440e-43	79.00	Nad4L n=1 Tax=Phaeophyceae sp. TaxID=2249243 RepID...	[more]
Q2TUC4_DICDH	6.880e-38	73.00	NADH dehydrogenase subunit 4L n=1 Tax=Dictyota dic...	[more]
A0A8F0FEY2_9PHAE	1.970e-37	75.27	NADH dehydrogenase subunit 4L n=1 Tax=Protohalopte...	[more]
A0A4Y5T8D2_9PHAE	4.630e-36	67.00	NADH dehydrogenase subunit 4L n=1 Tax=Dictyopteris...	[more]
A0A7S6ZPE7_9STRA	4.900e-31	56.00	Nad4L n=1 Tax=Schizocladia ischiensis TaxID=196139...	[more]
UPI001A9736EA	8.820e-30	62.11	NADH-quinone oxidoreductase subunit NuoK n=2 Tax=A...	[more]
A0A1Z8KZX0_9PROT	3.480e-29	59.38	NADH-quinone oxidoreductase subunit K n=2 Tax=Alph...	[more]

Pages

Properties


Property Name	Value
Start	1
Stop	1
Cds size	303
Model size	303
Exons	1
Hectar predicted targeting category	signal peptide
BRITE	ko00000,ko00001,ko00002,ko01000
Best eggNOG OG	NA\|NA\|NA
Best tax level	Bartonellaceae
COG Functional cat.	C
EC	1.6.5.3
EggNOG OGs	1RH0S@1224,2U93P@28211,48U6I@772,COG0713@1,COG0713@2
EggNOG free text desc.	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
GOs	GO:0003674,GO:0003824,GO:0003954,GO:0005575,GO:0005623,GO:0005886,GO:0006091,GO:0006119,GO:0006120,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008137,GO:0008150,GO:0008152,GO:0009117,GO:0009123,GO:0009126,GO:0009141,GO:0009144,GO:0009150,GO:0009161,GO:0009167,GO:0009199,GO:0009205,GO:0009259,GO:0009987,GO:0015980,GO:0016020,GO:0016310,GO:0016491,GO:0016651,GO:0016655,GO:0017144,GO:0019637,GO:0019693,GO:0022900,GO:0022904,GO:0030964,GO:0032991,GO:0034641,GO:0042773,GO:0042775,GO:0044237,GO:0044238,GO:0044281,GO:0044425,GO:0044459,GO:0044464,GO:0045271,GO:0045272,GO:0045333,GO:0046034,GO:0046483,GO:0050136,GO:0055086,GO:0055114,GO:0070469,GO:0070470,GO:0071704,GO:0071944,GO:0072521,GO:0098796,GO:0098797,GO:0098803,GO:1901135,GO:1901360,GO:1901564,GO:1902494,GO:1990204
KEGG Module	M00144
KEGG Pathway	ko00190,ko01100,map00190,map01100
KEGG Reaction	R11945
KEGG TC	3.D.1
KEGG ko	ko:K00340
KEGG rclass	RC00061
Preferred name	nuoK
Seed eggNOG ortholog	1134510.O9A_01006
Seed ortholog evalue	1.3e-21
Seed ortholog score	109.0
Taxonomic scope	Bacteria