Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Start | 1 |
| Stop | 1 |
| Cds size | 378 |
| Model size | 751 |
| Exons | 3 |
| Ec32 ortholog | Ec-11_002120.2 |
| Ec32 ortholog description | Hypothetical protein |
| Hectar predicted targeting category | other localisation |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig10118.129.1 >prot_E-siliculosus-1a_F_contig10118.129.1 ID=prot_E-siliculosus-1a_F_contig10118.129.1|Name=mRNA_E-siliculosus-1a_F_contig10118.129.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=126bp
MLTRPGETATTYSSPIKSILELNHIPSLKVRSGRPLDQSNRLCSVPVPQS
ESLTCRDGCNSPSGWCRSFLASPTSSVGREEQQRAKVQHKIPSSAPMKEY
PKEDSDSAVGTLPAHYGHAGTCVRR* back to topmRNA from alignment at E-siliculosus-1a_F_contig10118:781..2047- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_E-siliculosus-1a_F_contig10118.129.1 ID=mRNA_E-siliculosus-1a_F_contig10118.129.1|Name=mRNA_E-siliculosus-1a_F_contig10118.129.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=1267bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig10118:781..2047- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ATGCTTACACGTCCGGGCGAAACCGCAACTACATACTCCTCGCCTATTAA
AAGCATTCTTGAGTTGAATCATATCCCTTCCCTGAAGGTTCGGTCGGGTC
GTCCTCTAGACCAGAGCAACCGTCTGTGTTCCGTACCCGTGCCACAGTCC
GAATCCCTTACTTGCAGGGATGGATGCAACTCCCCCTCGGGCTGGTGCCG
CTCGTTCCTTGCATCCCCTACGTCCTCCGTGGGTCGGGAAGAACAACAGA
GGGCAAAGGTTCAACACAAAATACCATCGTCAGCACCTATGAAGGAGTAC
CCGAAGGAGGTACGTGAGGCGTGTGTCATGTTGTTTGTTCCCGCTGCCGG
GATGTGATCGAAAAAACAAAATGCGGCGATGAGTCCTTTAGGTACGTAAC
CAGAACTACTGATATGTAGAGGTTAACCTTGGGTCTTTTGTATGTGTGTG
TGAACCGCCCGTCCTTCGTTCCAGGACTCGGACAGCGCTGTTGGCACCCT
CCCAGCCCACTACGGACACGCCGGCACGTGTGTCCGAAGATAAACGTCCG
GTTGTATTTTCCTCGAGTTGCATCATAGACCGGGCACTCGTGTGGGCACC
ACCACCTACTGGCATAGACAGGTGCAGACCTGGTGGGGAGAGGAAGGACG
TCGATTCTGGTCTGATGCAGAGTACGACAACACTCCTGGATCCCTTGGGG
TCGGTGTACGATGCAGAGTACGTATCGGGCAGTCGTTATTTTCTTCTAGG
AACTACTCTTGGGATGGTGATTCTCCATCCACGTTAAGGCATACCATGTC
CTTGCGCCGAAATCCAGTTGACCCAGAGTTCCTTGTTTTTGCCCAAAACC
ATTGCCACTCCATGGTCGATTAAAATGATTCGAGATCGCCTAGGGTATAC
ACGGCGATTTTTTTATCACGCCAAACGTATTCTTACCGCCCGATGCCGTC
TGCCATGATTGTGCTGTTGAAGAACGTGTCTGGCAGTGCGATGCGGGCCT
GCAACAGCGCGAACGCAAAGCTGGTGGCGAGAGGCTAGGGCGTACTATTT
TGTTTGCGTGTGCCGGGTATGATCTTGTGGTGCTCGCCGCGGTTGTTGTT
GTTGTGTGGTTCGACTCCTTACGCTGTTCTACGTGTTTCCTGCGAAACAC
ATCGGCCAAGTATCAGCGAAAGGCGGGTGGTGCAATAGAGCGAAGAGCGA
AGAGCAGCAGGCTGTGCCTACCGGAGTGACGTTTTCAGCGACCAAGTTTA
CTCGAGATGGCCACTGG back to topCoding sequence (CDS) from alignment at E-siliculosus-1a_F_contig10118:781..2047- >mRNA_E-siliculosus-1a_F_contig10118.129.1 ID=mRNA_E-siliculosus-1a_F_contig10118.129.1|Name=mRNA_E-siliculosus-1a_F_contig10118.129.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=756bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig10118:781..2047- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ATGCTTACACGTCCGGGCGAAACCGCAACTACATACTCCTCGCCTATTAA
AAGCATTCTTGAGTTGAATCATATCCCTTCCCTGAAGGTTCGGTCGGGTC
GTCCTCTAGACCAGAGCAACCGTCTGTGTTCCGTACCCGTGCCACAGTCC
GAATCCCTTACTTGCAGGGATGGATGCAACTCCCCCTCGGGCTGGTGCCG
CTCGTTCCTTGCATCCCCTACGTCCTCCGTGGGTCGGGAAGAACAACAGA
GGGCAAAGGTTCAACACAAAATACCATCGTCAGCACCTATGAAGGAGTAC
CCGAAGGAGATGCTTACACGTCCGGGCGAAACCGCAACTACATACTCCTC
GCCTATTAAAAGCATTCTTGAGTTGAATCATATCCCTTCCCTGAAGGTTC
GGTCGGGTCGTCCTCTAGACCAGAGCAACCGTCTGTGTTCCGTACCCGTG
CCACAGTCCGAATCCCTTACTTGCAGGGATGGATGCAACTCCCCCTCGGG
CTGGTGCCGCTCGTTCCTTGCATCCCCTACGTCCTCCGTGGGTCGGGAAG
AACAACAGAGGGCAAAGGTTCAACACAAAATACCATCGTCAGCACCTATG
AAGGAGTACCCGAAGGAGGACTCGGACAGCGCTGTTGGCACCCTCCCAGC
CCACTACGGACACGCCGGCACGTGTGTCCGAAGATAAGACTCGGACAGCG
CTGTTGGCACCCTCCCAGCCCACTACGGACACGCCGGCACGTGTGTCCGA
AGATAA back to top
|