Homology
BLAST of mRNA_E-siliculosus-1a_F_contig10765.537.1 vs. uniprot
Match:
D7FUA0_ECTSI (Leucine Rich Repeat Protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUA0_ECTSI)
HSP 1 Score: 226 bits (575), Expect = 2.750e-66
Identity = 112/117 (95.73%), Postives = 113/117 (96.58%), Query Frame = 1
Query: 1 AAAALKAGDRYLQTRRVSKICDIAPDSTDCCLLARMLALQLSDGYVDGPLPTTDTAEERGTHTTAGMRGVEGGCGWSQDVGASPDSATEEAVMDWFVEEVADYEPNELDARKTTPAV 351
AAAALKAGDRYLQTRRVSKICDIAPDSTDCCLLAR LALQLSDGYVDG LPTTDTAEERGTHTTAGM GVEGGCGWSQD+GASPDSATEEAVMDWFVEEVADYEPN LDARKTTPAV
Sbjct: 765 AAAALKAGDRYLQTRRVSKICDIAPDSTDCCLLARTLALQLSDGYVDGTLPTTDTAEERGTHTTAGMGGVEGGCGWSQDIGASPDSATEEAVMDWFVEEVADYEPNNLDARKTTPAV 881
BLAST of mRNA_E-siliculosus-1a_F_contig10765.537.1 vs. uniprot
Match:
D7FUA2_ECTSI (Leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUA2_ECTSI)
HSP 1 Score: 218 bits (555), Expect = 6.250e-64
Identity = 108/117 (92.31%), Postives = 111/117 (94.87%), Query Frame = 1
Query: 1 AAAALKAGDRYLQTRRVSKICDIAPDSTDCCLLARMLALQLSDGYVDGPLPTTDTAEERGTHTTAGMRGVEGGCGWSQDVGASPDSATEEAVMDWFVEEVADYEPNELDARKTTPAV 351
AAAALKAGDRYLQTRRVSKICDIAPDSTDCCLLAR LALQLSDGYVDG LPTTDTAEERG+H TAGM GVEGGCGWSQD+GASPDSATEEAVMDWFVEEVADYEPN +DARKTT AV
Sbjct: 553 AAAALKAGDRYLQTRRVSKICDIAPDSTDCCLLARTLALQLSDGYVDGTLPTTDTAEERGSHATAGMGGVEGGCGWSQDIGASPDSATEEAVMDWFVEEVADYEPNNVDARKTTAAV 669
BLAST of mRNA_E-siliculosus-1a_F_contig10765.537.1 vs. uniprot
Match:
D7FUA1_ECTSI (Putative Leucine Rich Repeat Protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUA1_ECTSI)
HSP 1 Score: 216 bits (551), Expect = 2.600e-63
Identity = 108/117 (92.31%), Postives = 111/117 (94.87%), Query Frame = 1
Query: 1 AAAALKAGDRYLQTRRVSKICDIAPDSTDCCLLARMLALQLSDGYVDGPLPTTDTAEERGTHTTAGMRGVEGGCGWSQDVGASPDSATEEAVMDWFVEEVADYEPNELDARKTTPAV 351
AAAALKAGDRYLQTRRVSKICD+APDSTDCCLLAR LALQLSDGYVDG LPT DTAEERGTHTTAGM GVEG CGWSQD+GASPDSATEEAVMDWFVEEVADYEPN+LDARKTT AV
Sbjct: 580 AAAALKAGDRYLQTRRVSKICDMAPDSTDCCLLARALALQLSDGYVDGTLPTIDTAEERGTHTTAGMGGVEGECGWSQDIGASPDSATEEAVMDWFVEEVADYEPNKLDARKTTAAV 696
BLAST of mRNA_E-siliculosus-1a_F_contig10765.537.1 vs. uniprot
Match:
A0A6H5JSF6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSF6_9PHAE)
HSP 1 Score: 195 bits (495), Expect = 2.370e-61
Identity = 101/117 (86.32%), Postives = 102/117 (87.18%), Query Frame = 1
Query: 1 AAAALKAGDRYLQTRRVSKICDIAPDSTDCCLLARMLALQLSDGYVDGPLPTTDTAEERGTHTTAGMRGVEGGCGWSQDVGASPDSATEEAVMDWFVEEVADYEPNELDARKTTPAV 351
AAAAL AGDRYLQTRRVSKICDIAPDS CC LAR LALQLSDGYVDG LPTTDTAEERGTHTTAG G GWSQD+GASPD ATEEAVMDWFVEEVADYEPN LDARKTTPAV
Sbjct: 85 AAAALNAGDRYLQTRRVSKICDIAPDSAGCCSLARTLALQLSDGYVDGALPTTDTAEERGTHTTAG------GGGWSQDIGASPDPATEEAVMDWFVEEVADYEPNNLDARKTTPAV 195
BLAST of mRNA_E-siliculosus-1a_F_contig10765.537.1 vs. uniprot
Match:
A0A6H5JH23_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JH23_9PHAE)
HSP 1 Score: 87.0 bits (214), Expect = 3.910e-20
Identity = 48/75 (64.00%), Postives = 52/75 (69.33%), Query Frame = 1
Query: 127 DGYVDGPLPTTDTAEERGTHTTAGMRGVEGGCGWSQDVGASPDSATEEAVMDWFVEEVADYEPNELDARKTTPAV 351
D Y + L + A RG TA GWSQD+GASPD+ATEEAVMDWFVEEVADYEPN LDARKTTPAV
Sbjct: 18 DEYSNTKLRSCARAGYRGLFATAWG-------GWSQDIGASPDAATEEAVMDWFVEEVADYEPNNLDARKTTPAV 85
BLAST of mRNA_E-siliculosus-1a_F_contig10765.537.1 vs. uniprot
Match:
A0A6H5KC16_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KC16_9PHAE)
HSP 1 Score: 91.3 bits (225), Expect = 2.500e-19
Identity = 46/55 (83.64%), Postives = 48/55 (87.27%), Query Frame = 1
Query: 193 AGMRGV--EGGCGWSQDVGASPDSATEEAVMDWFVEEVADYEPNELDARKTTPAV 351
AG RG+ GG GWSQD+GASPDSATEEAVMDWFVEEVADYEPN LD RKTTPAV
Sbjct: 32 AGYRGLFATGGGGWSQDIGASPDSATEEAVMDWFVEEVADYEPNNLDTRKTTPAV 86
BLAST of mRNA_E-siliculosus-1a_F_contig10765.537.1 vs. uniprot
Match:
D7G8A7_ECTSI (Leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8A7_ECTSI)
HSP 1 Score: 90.5 bits (223), Expect = 8.770e-19
Identity = 52/118 (44.07%), Postives = 71/118 (60.17%), Query Frame = 1
Query: 1 AAAALKAGDRYLQTRRVSKICDIAPDSTDCCLLARMLALQLSDGYVDGPLPTTDTAEERGTHTTAGM---RGVEGGCGWSQDVGASPDSATEEAVMDWFVEEVADYEPNELDARKTTP 345
AA ALKAGD +QTRRV K+ D+APD+ +CC +A++L L+L+D D + T+ H+ AG G+ G C WSQ G PD A++E M+WF EE A PN + K+TP
Sbjct: 389 AAEALKAGDNNIQTRRVIKMTDLAPDAVECCSVAKLLGLRLTDYLSDETITTSYDGRGGPVHSAAGFGEGAGI-GACEWSQSNGGLPDCASDEDFMEWFAEEAASCVPN--NTGKSTP 503
BLAST of mRNA_E-siliculosus-1a_F_contig10765.537.1 vs. uniprot
Match:
D8LGB9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGB9_ECTSI)
HSP 1 Score: 84.0 bits (206), Expect = 8.870e-17
Identity = 44/92 (47.83%), Postives = 60/92 (65.22%), Query Frame = 1
Query: 64 DIAPDSTDCCLLARMLALQLSDGYVDGPLPTTDTAEERGTHTTAGMRGVEGGCGWSQDVGASPDSATEEAVMDWFVEEVADYEPNELDARKT 339
D+APD+ +CC LAR +AL+L+DG DGP+ T+ AEE+ T AG+ GG G D +EEAVM+WF+EEV +YEP+ D R+T
Sbjct: 160 DLAPDAVECCKLARTVALRLTDGLPDGPIATSHDAEEKRTPNAAGVGWAAGG----SKFGVLTDGVSEEAVMEWFIEEVTNYEPS--DRRET 245
BLAST of mRNA_E-siliculosus-1a_F_contig10765.537.1 vs. uniprot
Match:
A0A6H5KEA4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEA4_9PHAE)
HSP 1 Score: 82.4 bits (202), Expect = 4.810e-16
Identity = 56/139 (40.29%), Postives = 73/139 (52.52%), Query Frame = 1
Query: 1 AAAALKAGDRYLQTRRVSK-----------------------ICDIAPDSTDCCLLARMLALQLSDGYVDGPLPTTDTAEERGTHTTAGMRGVEGGCGWSQDVGASPDSATEEAVMDWFVEEVADYEPNELDARKTTPA 348
AAAALKA D +QTRRV K I D+A D+ + C LAR LAL++++G G + TTD + GG GW+ D+GA PD +EEAVM+WF EEVA++E N A + TPA
Sbjct: 164 AAAALKARDHRMQTRRVVKHLQPSTYVHSRPTGLNQLFDDWQITDLAADAVERCSLARRLALRMTEGLAAGTISTTDNSV--------------GGRGWNLDLGALPDGTSEEAVMEWFTEEVANHEANTT-ASRGTPA 287
BLAST of mRNA_E-siliculosus-1a_F_contig10765.537.1 vs. uniprot
Match:
D7FPS8_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPS8_ECTSI)
HSP 1 Score: 82.0 bits (201), Expect = 8.480e-16
Identity = 50/115 (43.48%), Postives = 60/115 (52.17%), Query Frame = 1
Query: 1 AAAALKAGDRYLQTRRVSKICDIAPDSTDCCLLARMLALQLSDGYVDGPLPTTDTAEERGTHTTAGMRGVEGGCGWSQDVGASPDSATEEAVMDWFVEEVADYEPNELDARKTTP 345
A+AALK GDRY+QTRRV KI DIA D+ +CC LAR LA GG GWSQ A PD A + VM+WF +EVA+ EP + A +TTP
Sbjct: 866 ASAALKTGDRYIQTRRVVKIADIARDAVECCSLARRLAXXXXXXXXXXXXXXXXXXX---------XXXXXGGGGWSQGEYALPDGARDRDVMEWFADEVANLEPQDHHATRTTP 971
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig10765.537.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90 )
Total hits: 14
0 1 Expect = 2.75e-66 / Id = 95.73 Expect = 6.25e-64 / Id = 92.31 Expect = 2.60e-63 / Id = 92.31 Expect = 2.37e-61 / Id = 86.32 Expect = 3.91e-20 / Id = 64.00 Expect = 2.50e-19 / Id = 83.64 Expect = 8.77e-19 / Id = 44.07 Expect = 8.87e-17 / Id = 47.83 Expect = 4.81e-16 / Id = 40.29 Expect = 8.48e-16 / Id = 43.48 Sequence D7FUA0_ECTSI D7FUA2_ECTSI D7FUA1_ECTSI A0A6H5JSF6_9PHAE A0A6H5JH23_9PHAE A0A6H5KC16_9PHAE D7G8A7_ECTSI D8LGB9_ECTSI A0A6H5KEA4_9PHAE D7FPS8_ECTSI Pages
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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name Value
Start 0 Stop 0 Cds size 351 Model size 351 Exons 3 Hectar predicted targeting category other localisation BRITE ko00000,ko00001,ko00002,ko01000,ko01001 Best eggNOG OG NA|NA|NA Best tax level Eukaryota COG Functional cat. S EC 2.7.11.1 EggNOG OGs 2QQYD@2759,COG4886@1 EggNOG free text desc. protein serine/threonine kinase activity GOs GO:0005575,GO:0005623,GO:0005886,GO:0005911,GO:0009506,GO:0016020,GO:0030054,GO:0042995,GO:0044464,GO:0055044,GO:0071944,GO:0090406,GO:0120025 KEGG Module M00686 KEGG Pathway ko04010,ko04064,ko04620,ko04621,ko04624,ko04722,ko05133,ko05140,ko05142,ko05145,ko05152,ko05162,ko05164,ko05169,map04010,map04064,map04620,map04621,map04624,map04722,map05133,map05140,map05142,map05145,map05152,map05162,map05164,map05169 KEGG ko ko:K04730,ko:K04733 Seed eggNOG ortholog 2880.D7FUA0 Seed ortholog evalue 8.5e-57 Seed ortholog score 226.1 Taxonomic scope Eukaryota
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig10765.537.1
>prot_E-siliculosus-1a_F_contig10765.537.1 ID=prot_E-siliculosus-1a_F_contig10765.537.1|Name=mRNA_E-siliculosus-1a_F_contig10765.537.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=117bp
AAAALKAGDRYLQTRRVSKICDIAPDSTDCCLLARMLALQLSDGYVDGPL back to top mRNA from alignment at E-siliculosus-1a_F_contig10765:1083..2095+
Legend: polypeptide CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_F_contig10765.537.1 ID=mRNA_E-siliculosus-1a_F_contig10765.537.1|Name=mRNA_E-siliculosus-1a_F_contig10765.537.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=1013bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig10765:1083..2095+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)GCTGCCGCAGCTTTGAAGGCGGGAGACCGCTATCTGCAAACTCGACGCGT
GTCGAAG GTGAGCTTGTTTCACGTGTACGATGTCTCGACGGTTCTACGTA
AGATGCGCCCGCCCATTGGCTTGTGCTATGGTCGACACTGACGCACCCAC
GACGTTTCGGATACTCTGGCAGATCTGTGACATCGCACCCGACTCGACTG
ACTGTTGTTTGCTGGCGAGGATGTTGGCGTTGCAACTCTCGGATGGGTAT
GTGGACGGCCCCCTCCCCACGACTGACACGGCTGAAGAACGTGGCACGCA
CACCACAGCAGGCATGCGTGGTGTTGAGG GTGAGGATCCACAGCGCAATT
GGCTTGTCCCTTGGCAGCCAACGCCGCTTTACTGAGTGGGGTTTGTTGGA
TGGCTGAGCCCACCATCCTGCAACATAGTGGGCGTACGCCTCAATTGCTT
GTGGGCAATTGTGCTTATGGAACCGCGATGGTATTGGTAGAAACGCATGC
ACCCTTAGCGCCATGGTGTTTGGCTTAACGTTTTGCGATGGGTACGTGGT
TTACGAAACCATCCGCTCCACCTTGCCCTGTTGAAGATAATAGACGATCC
AGAGCGCTTTTTTCCATCACCTTGATATTCGGTGCACCCAGCCCCCATTA
GGTGTCGGGCCTTGGATTGATCCATGTGTTTGGCGTATGTGTGGTAGCGA
GTGAGGTTGTTCTTGGGGTCTTGTCGCGACACCCTTCGAACCCACCGTGA
GCCCGATTGCAAGGGCATTGCCAAGGCCTCACGCACCTGCAACGAGTTTT
TATGTGGGATGAGTATTCCAAGCCAACGTCGAGATCTTGTGCTCGAACGG
GGTACGGTGGGTTGTTTGCATTTCAGGTGGGTGCGGATGGAGCCAAGATG
TGGGAGCCTCGCCAGACTCTGCGACCGAGGAAGCCGTCATGGACTGGTTT
GTCGAAGAAGTGGCGGACTACGAGCCGAACGAACTCGATGCAAGGAAAAC
AACTCCTGCCGTA back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig10765:1083..2095+
>mRNA_E-siliculosus-1a_F_contig10765.537.1 ID=mRNA_E-siliculosus-1a_F_contig10765.537.1|Name=mRNA_E-siliculosus-1a_F_contig10765.537.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=702bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig10765:1083..2095+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female) back to top