mRNA_E-fasciculatus_F_contig10024.41.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Homology

BLAST of mRNA_E-fasciculatus_F_contig10024.41.1 vs. uniprot
Match: D7FY66_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FY66_ECTSI)

HSP 1 Score: 162 bits (411), Expect = 5.160e-47
Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 1

Query:    1 EIDFPKSSEAFVCFECTARRVSWTYLMTGMETGMRALGHANETYFRVNEEGILCIQHQIPMSMGQTSFVDVLLCPD 228
            EIDFPKSSEAFVCFECTARRVSWTYLMTGMETGMRALGHANETYFRVNEEGILCIQHQIPMSMGQTSFVDVLLCPD
Sbjct:  307 EIDFPKSSEAFVCFECTARRVSWTYLMTGMETGMRALGHANETYFRVNEEGILCIQHQIPMSMGQTSFVDVLLCPD 382

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BLAST of mRNA_E-fasciculatus_F_contig10024.41.1 vs. uniprot
Match: A0A6H5JRH0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRH0_9PHAE)

HSP 1 Score: 116 bits (290), Expect = 3.700e-30
Identity = 52/59 (88.14%), Postives = 56/59 (94.92%), Query Frame = 1

Query:    1 EIDFPKSSEAFVCFECTARRVSWTYLMTGMETGMRALGHANETYFRVNEEGILCIQHQI 177
            EIDFPKSS++ VCFECTAR VSW +LMTGMETGMRALGHANETYFRVNEEGILCIQHQ+
Sbjct:  224 EIDFPKSSQSLVCFECTARGVSWAFLMTGMETGMRALGHANETYFRVNEEGILCIQHQV 282

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BLAST of mRNA_E-fasciculatus_F_contig10024.41.1 vs. uniprot
Match: A0A835YYW5_9STRA (Repair protein Rad1/Rec1/Rad17-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYW5_9STRA)

HSP 1 Score: 87.8 bits (216), Expect = 6.690e-19
Identity = 39/73 (53.42%), Postives = 54/73 (73.97%), Query Frame = 1

Query:    4 IDFPKSSEAFVCFECTARRVSWTYLMTGMETGMRALGHANETYFRVNEEGILCIQHQIPMSMGQTSFVDVLLC 222
            I FP+SSEAFV F CT   + W+Y ++ +E GMRAL  A ET+ R+NEEGI+CIQHQ+ ++ G  ++VD L+C
Sbjct:  229 IQFPRSSEAFVHFSCTPPSLRWSYALSALEGGMRALPFAQETFVRINEEGIMCIQHQVQVA-GHNTYVDFLIC 300

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BLAST of mRNA_E-fasciculatus_F_contig10024.41.1 vs. uniprot
Match: A0A7S0XDK7_9STRA (Hypothetical protein (Fragment) n=2 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0XDK7_9STRA)

HSP 1 Score: 78.6 bits (192), Expect = 5.500e-16
Identity = 34/76 (44.74%), Postives = 51/76 (67.11%), Query Frame = 1

Query:    1 EIDFPKSSEAFVCFECTARRVSWTYLMTGMETGMRALGHANETYFRVNEEGILCIQHQIPMSMGQTSFVDVLLCPD 228
            EI+FP+ S+ FV F C  +   WTY +T ++ GM+AL  + ET+ R+NEEG++CIQHQI  + G   ++D L+  D
Sbjct:  149 EIEFPRLSDLFVSFRCD-KSSKWTYPLTSLQLGMKALNISKETFIRMNEEGVICIQHQIETNRGHEIYIDYLMVSD 223

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BLAST of mRNA_E-fasciculatus_F_contig10024.41.1 vs. uniprot
Match: A0A4D9CMN7_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CMN7_9STRA)

HSP 1 Score: 77.8 bits (190), Expect = 2.380e-15
Identity = 39/73 (53.42%), Postives = 52/73 (71.23%), Query Frame = 1

Query:    1 EIDFPKSSEAFVCFECTARRVSWTYLMTGMETGMRALGHANETYFRVNEEGILCIQHQIPMSMG-QTSFVDVL 216
            EI  PKSSEAFV F+C+  R SW+Y +  +  GMRAL  A ETY R+NEEGI+C+QHQ+  +   Q++F+D L
Sbjct:  212 EIFLPKSSEAFVHFDCSEAR-SWSYGLGALNQGMRALTVAKETYVRINEEGIMCVQHQVENTASRQSTFIDFL 283

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BLAST of mRNA_E-fasciculatus_F_contig10024.41.1 vs. uniprot
Match: A0A7S2G8B6_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2G8B6_9STRA)

HSP 1 Score: 67.0 bits (162), Expect = 1.840e-11
Identity = 32/76 (42.11%), Postives = 46/76 (60.53%), Query Frame = 1

Query:    1 EIDFPKSSEAFVCFECTARRVSWTYLMTGMETGMRALGHANETYFRVNEEGILCIQHQIPMSMGQTSFVDVLLCPD 228
            +I+FP+SS+ F  FECT   +   Y       GMRAL  + E+YFR+NE G+LCIQH +    G   F+D ++ P+
Sbjct:  190 DIEFPRSSDLFELFECT-ETMKTEYDYDSFVQGMRALTVSEESYFRINEGGLLCIQHHVETHGGGRCFIDFIMLPN 264

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BLAST of mRNA_E-fasciculatus_F_contig10024.41.1 vs. uniprot
Match: A0A8K1C6J7_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C6J7_PYTOL)

HSP 1 Score: 65.5 bits (158), Expect = 9.670e-11
Identity = 32/82 (39.02%), Postives = 48/82 (58.54%), Query Frame = 1

Query:    1 EIDFPKSSEAFVCFECTARRVS------WTYLMTGMETGMRALGHANETYFRVNEEGILCIQHQIPMSMGQTSFVDVLLCPD 228
            EI+F +SS AF+ F CT    S       T+ +  ++   +ALGH+NET+ R+N +G L +QH I    G  +FVD L+ P+
Sbjct:  263 EIEFARSSSAFIEFFCTNDETSDDGSASATFHVAVLQQAFKALGHSNETFLRMNADGFLSVQHMIESGSGDKAFVDALISPE 344

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BLAST of mRNA_E-fasciculatus_F_contig10024.41.1 vs. uniprot
Match: F0XY36_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XY36_AURAN)

HSP 1 Score: 61.6 bits (148), Expect = 2.590e-9
Identity = 31/78 (39.74%), Postives = 44/78 (56.41%), Query Frame = 1

Query:    1 EIDFPKSSEAFVCFECTARRVSWTYLMTGMETGMRALGHANETYFRVNEEGILCIQHQIP--MSMGQTSFVDVLLCPD 228
            +ID P+  +AFV FE      SWTY       GM+AL H++ETY RVN+ G+L +QH +      G   +++ L C D
Sbjct:  205 QIDVPR--DAFVVFEAPEETRSWTYQTQAFLHGMKALPHSHETYVRVNDHGMLLVQHMVANDRGAGDNMYLEYLCCSD 280

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BLAST of mRNA_E-fasciculatus_F_contig10024.41.1 vs. uniprot
Match: A0A7S4NJK3_9EUKA (Hypothetical protein n=1 Tax=Paramoeba aestuarina TaxID=180227 RepID=A0A7S4NJK3_9EUKA)

HSP 1 Score: 57.4 bits (137), Expect = 6.610e-8
Identity = 30/76 (39.47%), Postives = 49/76 (64.47%), Query Frame = 1

Query:    4 IDFPKSSEAFVCFECTARRVSWTYLMTGMETGMRALGH-ANETYFRVNEEGILCIQHQIPMSMGQ-TSFVDVLLCP 225
            I FP+ S AFV F+C + ++ +TY +  ++  ++A G+ A +T  R+NE G+LC+QH + +  G+ T FVD  L P
Sbjct:  216 IQFPRDSPAFVEFDCRSTQI-FTYKLQHLQPALKASGNLATQTQIRMNERGMLCMQHMLSVPDGKKTCFVDFYLLP 290

The following BLAST results are available for this feature:

BLAST of mRNA_E-fasciculatus_F_contig10024.41.1 vs. uniprot

BLAST of mRNA_E-fasciculatus_F_contig10024.41.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 9

ZOOM

x 1

POSITION

0


Match Name	E-value	Identity	Description
D7FY66_ECTSI	5.160e-47	100.00	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5JRH0_9PHAE	3.700e-30	88.14	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A835YYW5_9STRA	6.690e-19	53.42	Repair protein Rad1/Rec1/Rad17-domain-containing p...	[more]
A0A7S0XDK7_9STRA	5.500e-16	44.74	Hypothetical protein (Fragment) n=2 Tax=Chromulina...	[more]
A0A4D9CMN7_9STRA	2.380e-15	53.42	Uncharacterized protein n=1 Tax=Nannochloropsis sa...	[more]
A0A7S2G8B6_9STRA	1.840e-11	42.11	Hypothetical protein n=1 Tax=Florenciella parvula ...	[more]
A0A8K1C6J7_PYTOL	9.670e-11	39.02	Uncharacterized protein n=1 Tax=Pythium oligandrum...	[more]
F0XY36_AURAN	2.590e-9	39.74	Uncharacterized protein n=1 Tax=Aureococcus anopha...	[more]
A0A7S4NJK3_9EUKA	6.610e-8	39.47	Hypothetical protein n=1 Tax=Paramoeba aestuarina ...	[more]

Relationships

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1622927504.6570969-CDS-E-fasciculatus_F_contig10024:3843..3897	1622927504.6570969-CDS-E-fasciculatus_F_contig10024:3843..3897	Ectocarpus fasciculatus Ec846f_Ec191_B4_f female	CDS	E-fasciculatus_F_contig10024 3844..3897 -
1695995567.2700744-CDS-E-fasciculatus_F_contig10024:3843..3897	1695995567.2700744-CDS-E-fasciculatus_F_contig10024:3843..3897	Ectocarpus fasciculatus Ec846f_Ec191_B4_f female	CDS	E-fasciculatus_F_contig10024 3844..3897 -
1622927504.675886-CDS-E-fasciculatus_F_contig10024:4771..4945	1622927504.675886-CDS-E-fasciculatus_F_contig10024:4771..4945	Ectocarpus fasciculatus Ec846f_Ec191_B4_f female	CDS	E-fasciculatus_F_contig10024 4772..4945 -
1695995567.2828503-CDS-E-fasciculatus_F_contig10024:4771..4945	1695995567.2828503-CDS-E-fasciculatus_F_contig10024:4771..4945	Ectocarpus fasciculatus Ec846f_Ec191_B4_f female	CDS	E-fasciculatus_F_contig10024 4772..4945 -

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_E-fasciculatus_F_contig10024.41.1	prot_E-fasciculatus_F_contig10024.41.1	Ectocarpus fasciculatus Ec846f_Ec191_B4_f female	polypeptide	E-fasciculatus_F_contig10024 3844..4945 -