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Homology
BLAST of mRNA_E-fasciculatus_F_contig1009.95.1 vs. uniprot
Match: D7G731_ECTSI (Ankyrin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G731_ECTSI) HSP 1 Score: 635 bits (1638), Expect = 1.230e-224 Identity = 377/409 (92.18%), Postives = 385/409 (94.13%), Query Frame = 1 Query: 1 MDTDDVQHRAQDKDNEARRIKRQLEVAERRVKNSLYINEAHESLAAKANEREKEANARAAELGRRLDRALEKLESIERKDMILNLETSCARDEEQTFFAEQELRAHQMDPELYLPVNTAKRRQVARSEKRLHRLRLRHESQSAALSQAQATERLHADLRRAAGLGDIPQTMKCLDSGISVNVPDQSGLSAFLYACGQANADLVQILVDAGGDVLDGDGTITGLIIAARKGTSGXXXXXXXXXXXVCARDSAGGTALHAATLHRHVNVXXXXXXXXXXXXXXXXXXXXXXXMLASVSSGKNGGGDGKGGETGAEVAGLLLEWGASADIKNAKGLTPISAALDTRNRAMVLAYREFFGEDSGLAAVDADFDVESNRSDTTPATDNGRLPPERSKGATAVASPTRERNTFSA 1227
MDTDD +HRA DKDNEARRIKRQLEVAERRVKNS YINEAHESLAAKA EREKEANARAAELGRRLDRALEKLESIERKDMILNLETSCARDEEQTFFAE+ELRAHQMDPELYLPVNTAKRRQVARSEKRL RLRLRHESQSAALSQAQATERLHADLRRAAGLGDIPQTMKCLDSGISVNVPDQSGLSAFLYACGQANA+LVQILVDAGGDVLDGDGTITGLIIAARKGT G VCARDSAGGTALHAATLHRHV+ XXXXXXXXXXXXXXXXXXXXXXXMLASVSSGK+GG D +GGETGA+VAGLLLEWGASADIKN+KGLTPISAALDTRNRAMVLAYREFFGEDSGLAAVDADFDVESNRSDTTPATDNGRLPPE K ATAVA PTRERNTFSA
Sbjct: 157 MDTDDGRHRALDKDNEARRIKRQLEVAERRVKNSFYINEAHESLAAKATEREKEANARAAELGRRLDRALEKLESIERKDMILNLETSCARDEEQTFFAERELRAHQMDPELYLPVNTAKRRQVARSEKRLRRLRLRHESQSAALSQAQATERLHADLRRAAGLGDIPQTMKCLDSGISVNVPDQSGLSAFLYACGQANAELVQILVDAGGDVLDGDGTITGLIIAARKGTMGVVQTLLEAGADVCARDSAGGTALHAATLHRHVDXXXXXXXXXXXXXXXXXXXXXXXXMLASVSSGKDGGSDVRGGETGADVAGLLLEWGASADIKNSKGLTPISAALDTRNRAMVLAYREFFGEDSGLAAVDADFDVESNRSDTTPATDNGRLPPESPKKATAVADPTRERNTFSA 565
BLAST of mRNA_E-fasciculatus_F_contig1009.95.1 vs. uniprot
Match: A0A7R9VLG3_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9VLG3_9STRA) HSP 1 Score: 80.1 bits (196), Expect = 6.790e-14 Identity = 64/191 (33.51%), Postives = 92/191 (48.17%), Query Frame = 1 Query: 472 LRRAAGLGDIPQTMKCLDSGISVNVPDQSGLSAFLYACGQANADLVQILVDAGGDVLDGDGTITGLIIAARKGTSGXXXXXXXXXXXVCARDSAGGTALHAATLHRHVNVXXXXXXXXXXXXXXXXXXXXXXXMLASVSSGKNGGGDGKGGETGAEVAGLLLEWGASADIKNAKGLTPISAALDTRNRAMV 1044
+R+A+ GD + ++ G+SVNVPD++G SAF YACG + D V+++V + D+ D DG T LI A R G + V +RD G TAL A +V+ XXXX + DG+ E+A LLL+ GA A KNA G+TP+ A R++ +V
Sbjct: 1 MRQASSRGDTKCIKQLMEQGVSVNVPDKAGFSAFKYACGGGHLDAVRLMVQSA-DLNDADGRTTALIAATRNGHAPVVRFLLEEGADVESRDDGGNTALLIACAGGYVDCARALXXXXKKGGRRGGGADPNAANAVGNAGLHLCARDGR-----EEIASLLLDRGAEAGAKNASGMTPMEIAKARRHQGVV 185
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Taxonomic scope | Eukaryota |
| Seed ortholog score | 645.2 |
| Seed ortholog evalue | 2.1e-182 |
| Seed eggNOG ortholog | 2880.D7G731 |
| EggNOG free text desc. | response to abiotic stimulus |
| EggNOG OGs | COG0666@1,KOG4177@2759 |
| COG Functional cat. | G |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
| Hectar predicted targeting category | other localisation |
| Ec32 ortholog description | Ankyrin repeat-containing domain |
| Ec32 ortholog | Ec-01_011230.1 |
| Exons | 2 |
| Model size | 1230 |
| Cds size | 1230 |
| Stop | 1 |
| Start | 1 |
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig1009.95.1 >prot_E-fasciculatus_F_contig1009.95.1 ID=prot_E-fasciculatus_F_contig1009.95.1|Name=mRNA_E-fasciculatus_F_contig1009.95.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=410bp
MDTDDVQHRAQDKDNEARRIKRQLEVAERRVKNSLYINEAHESLAAKANE
REKEANARAAELGRRLDRALEKLESIERKDMILNLETSCARDEEQTFFAE
QELRAHQMDPELYLPVNTAKRRQVARSEKRLHRLRLRHESQSAALSQAQA
TERLHADLRRAAGLGDIPQTMKCLDSGISVNVPDQSGLSAFLYACGQANA
DLVQILVDAGGDVLDGDGTITGLIIAARKGTSGVVQTLLEAGADVCARDS
AGGTALHAATLHRHVNVVRVLLEAGSDWNAIDQGNNTPLHMLASVSSGKN
GGGDGKGGETGAEVAGLLLEWGASADIKNAKGLTPISAALDTRNRAMVLA
YREFFGEDSGLAAVDADFDVESNRSDTTPATDNGRLPPERSKGATAVASP
TRERNTFSA* back to topmRNA from alignment at E-fasciculatus_F_contig1009:17298..19020+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_E-fasciculatus_F_contig1009.95.1 ID=mRNA_E-fasciculatus_F_contig1009.95.1|Name=mRNA_E-fasciculatus_F_contig1009.95.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=1723bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1009:17298..19020+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ATGGATACCGACGACGTGCAACATCGTGCGCAAGACAAGGACAACGAAGC
TCGGCGGATCAAACGACAGCTGGAAGTTGCCGAGCGCAGGGTGAAAAACT
CGCTTTACATCAACGAGGCACACGAAAGCTTGGCAGCCAAGGCGAACGAA
AGAGAAAAGGAGGCTAATGCCCGCGCGGCCGAGCTCGGGCGCAGGCTGGA
CCGTGCGCTCGAAAAGCTGGAATCCATCGAGCGCAAGGACATGATACTAA
ACCTCGAAACATCCTGTGCGAGAGACGAGGAACAAACATTTTTCGCCGAA
CAAGAATTACGAGCCCACCAGATGGACCCCGAGCTATACCTGCCGGTCAA
CACTGCCAAGCGACGGCAGGTGGCTCGCTCGGAGAAGCGCCTCCATCGCT
TGCGGCTGCGCCACGAAAGTCAAAGTGCCGCCCTGTCCCAGGCACAAGCG
ACGGAGCGGTTACACGCAGACCTAAGGAGAGCGGCAGGTTTAGGAGACAT
ACCCCAGACGATGAAGTGCTTGGATTCAGGGATCTCAGTGAATGTGCCGG
ATCAGAGTGGACTCTCTGCTTTTCTGTACGCCTGCGGCCAGGCAAATGCT
GACTTGGTTCAAATTTTAGTAGATGCGGGGGGGGATGTCCTTGATGGCGA
TGGCACCATCACGGGGCTCATCATCGCGGCAAGGAAGGTGAGGGTCGGGC
GCAGAAACCTGAACGAAGACCCCATGGGTTCCGGCAACAATTTTTTGTAG
TTCAAAAGGAGTACATAGTTGGACTCCTGTCCTGCTAGAGAACCTGATAT
CGGTCAACAGTGCCGTTCAAGGTGAACAAAGCCTACACACAACGACGTGG
TTCATTTTCCAATATTTGTCGTGCCAAAACGCGGAAAATTGACTCTTGAT
GCCATTCTCGGGGAGGCGTGTGAGTCCTCTATCTACCGCCCGTTCTACTT
CAGGTGTTTGCAAACAGCAACAACAACAGCAGCACCACGTAGCGTAGTAG
ACTAAGTAGCCGTCGCGCCCAAGAACCCCCAAGAACACGTTCTTCCTGCC
ACAAGTTTGTCTGTGGATGGATGCTGCGCATTCTAGACATGAGAAACATA
CAGATTGTGGGCGGCACCACCACCAACGCTACTATTGCTACGACACCCCC
CCCCGCTTTTCCGTCCATCGAACGAAAAAGGGAACCTCGGGAGTGGTCCA
AACGCTACTGGAAGCCGGCGCAGACGTGTGCGCTCGCGATTCAGCAGGAG
GGACCGCCCTTCACGCAGCAACTCTCCATCGGCACGTGAACGTCGTCCGA
GTTTTGCTCGAAGCAGGATCGGACTGGAACGCTATCGACCAGGGCAACAA
CACCCCGCTGCACATGCTAGCGTCGGTATCTTCAGGCAAGAACGGAGGGG
GTGACGGTAAAGGAGGGGAAACGGGTGCCGAGGTCGCCGGTCTGCTCTTG
GAGTGGGGAGCCTCAGCAGACATTAAGAACGCAAAGGGCTTGACTCCGAT
ATCGGCTGCCCTCGACACGAGGAATCGGGCAATGGTACTCGCATACCGAG
AGTTTTTTGGCGAAGACAGCGGCCTTGCGGCTGTTGACGCTGATTTCGAT
GTTGAGAGCAATCGTAGCGATACTACTCCTGCCACGGATAACGGACGGTT
GCCGCCAGAAAGATCCAAGGGGGCCACTGCTGTCGCAAGTCCTACACGCG
AGCGAAACACATTCAGTGCCTGA back to topCoding sequence (CDS) from alignment at E-fasciculatus_F_contig1009:17298..19020+ >mRNA_E-fasciculatus_F_contig1009.95.1 ID=mRNA_E-fasciculatus_F_contig1009.95.1|Name=mRNA_E-fasciculatus_F_contig1009.95.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=2460bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1009:17298..19020+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ATGGATACCGACGACGTGCAACATCGTGCGCAAGACAAGGACAACGAAGC
TCGGCGGATCAAACGACAGCTGGAAGTTGCCGAGCGCAGGGTGAAAAACT
CGCTTTACATCAACGAGGCACACGAAAGCTTGGCAGCCAAGGCGAACGAA
AGAGAAAAGGAGGCTAATGCCCGCGCGGCCGAGCTCGGGCGCAGGCTGGA
CCGTGCGCTCGAAAAGCTGGAATCCATCGAGCGCAAGGACATGATACTAA
ACCTCGAAACATCCTGTGCGAGAGACGAGGAACAAACATTTTTCGCCGAA
CAAGAATTACGAGCCCACCAGATGGACCCCGAGCTATACCTGCCGGTCAA
CACTGCCAAGCGACGGCAGGTGGCTCGCTCGGAGAAGCGCCTCCATCGCT
TGCGGCTGCGCCACGAAAGTCAAAGTGCCGCCCTGTCCCAGGCACAAGCG
ACGGAGCGGTTACACGCAGACCTAAGGAGAGCGGCAGGTTTAGGAGACAT
ACCCCAGACGATGAAGTGCTTGGATTCAGGGATCTCAGTGAATGTGCCGG
ATCAGAGTGGACTCTCTGCTTTTCTGTACGCCTGCGGCCAGGCAAATGCT
GACTTGGTTCAAATTTTAGTAGATGCGGGGGGGGATGTCCTTGATGGCGA
TGGCACCATCACGGGGCTCATCATCGCGGCAAGGAAGATGGATACCGACG
ACGTGCAACATCGTGCGCAAGACAAGGACAACGAAGCTCGGCGGATCAAA
CGACAGCTGGAAGTTGCCGAGCGCAGGGTGAAAAACTCGCTTTACATCAA
CGAGGCACACGAAAGCTTGGCAGCCAAGGCGAACGAAAGAGAAAAGGAGG
CTAATGCCCGCGCGGCCGAGCTCGGGCGCAGGCTGGACCGTGCGCTCGAA
AAGCTGGAATCCATCGAGCGCAAGGACATGATACTAAACCTCGAAACATC
CTGTGCGAGAGACGAGGAACAAACATTTTTCGCCGAACAAGAATTACGAG
CCCACCAGATGGACCCCGAGCTATACCTGCCGGTCAACACTGCCAAGCGA
CGGCAGGTGGCTCGCTCGGAGAAGCGCCTCCATCGCTTGCGGCTGCGCCA
CGAAAGTCAAAGTGCCGCCCTGTCCCAGGCACAAGCGACGGAGCGGTTAC
ACGCAGACCTAAGGAGAGCGGCAGGTTTAGGAGACATACCCCAGACGATG
AAGTGCTTGGATTCAGGGATCTCAGTGAATGTGCCGGATCAGAGTGGACT
CTCTGCTTTTCTGTACGCCTGCGGCCAGGCAAATGCTGACTTGGTTCAAA
TTTTAGTAGATGCGGGGGGGGATGTCCTTGATGGCGATGGCACCATCACG
GGGCTCATCATCGCGGCAAGGAAGGGAACCTCGGGAGTGGTCCAAACGCT
ACTGGAAGCCGGCGCAGACGTGTGCGCTCGCGATTCAGCAGGAGGGACCG
CCCTTCACGCAGCAACTCTCCATCGGCACGTGAACGTCGTCCGAGTTTTG
CTCGAAGCAGGATCGGACTGGAACGCTATCGACCAGGGCAACAACACCCC
GCTGCACATGCTAGCGTCGGTATCTTCAGGCAAGAACGGAGGGGGTGACG
GTAAAGGAGGGGAAACGGGTGCCGAGGTCGCCGGTCTGCTCTTGGAGTGG
GGAGCCTCAGCAGACATTAAGAACGCAAAGGGCTTGACTCCGATATCGGC
TGCCCTCGACACGAGGAATCGGGCAATGGTACTCGCATACCGAGAGTTTT
TTGGCGAAGACAGCGGCCTTGCGGCTGTTGACGCTGATTTCGATGTTGAG
AGCAATCGTAGCGATACTACTCCTGCCACGGATAACGGACGGTTGCCGCC
AGAAAGATCCAAGGGGGCCACTGCTGTCGCAAGTCCTACACGCGAGCGAA
ACACATTCAGTGCCTGAGGAACCTCGGGAGTGGTCCAAACGCTACTGGAA
GCCGGCGCAGACGTGTGCGCTCGCGATTCAGCAGGAGGGACCGCCCTTCA
CGCAGCAACTCTCCATCGGCACGTGAACGTCGTCCGAGTTTTGCTCGAAG
CAGGATCGGACTGGAACGCTATCGACCAGGGCAACAACACCCCGCTGCAC
ATGCTAGCGTCGGTATCTTCAGGCAAGAACGGAGGGGGTGACGGTAAAGG
AGGGGAAACGGGTGCCGAGGTCGCCGGTCTGCTCTTGGAGTGGGGAGCCT
CAGCAGACATTAAGAACGCAAAGGGCTTGACTCCGATATCGGCTGCCCTC
GACACGAGGAATCGGGCAATGGTACTCGCATACCGAGAGTTTTTTGGCGA
AGACAGCGGCCTTGCGGCTGTTGACGCTGATTTCGATGTTGAGAGCAATC
GTAGCGATACTACTCCTGCCACGGATAACGGACGGTTGCCGCCAGAAAGA
TCCAAGGGGGCCACTGCTGTCGCAAGTCCTACACGCGAGCGAAACACATT
CAGTGCCTGA back to top
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