mRNA_E-fasciculatus_F_contig1009.95.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Homology

BLAST of mRNA_E-fasciculatus_F_contig1009.95.1 vs. uniprot
Match: D7G731_ECTSI (Ankyrin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G731_ECTSI)

HSP 1 Score: 635 bits (1638), Expect = 1.230e-224
Identity = 377/409 (92.18%), Postives = 385/409 (94.13%), Query Frame = 1

Query:    1 MDTDDVQHRAQDKDNEARRIKRQLEVAERRVKNSLYINEAHESLAAKANEREKEANARAAELGRRLDRALEKLESIERKDMILNLETSCARDEEQTFFAEQELRAHQMDPELYLPVNTAKRRQVARSEKRLHRLRLRHESQSAALSQAQATERLHADLRRAAGLGDIPQTMKCLDSGISVNVPDQSGLSAFLYACGQANADLVQILVDAGGDVLDGDGTITGLIIAARKGTSGXXXXXXXXXXXVCARDSAGGTALHAATLHRHVNVXXXXXXXXXXXXXXXXXXXXXXXMLASVSSGKNGGGDGKGGETGAEVAGLLLEWGASADIKNAKGLTPISAALDTRNRAMVLAYREFFGEDSGLAAVDADFDVESNRSDTTPATDNGRLPPERSKGATAVASPTRERNTFSA 1227
            MDTDD +HRA DKDNEARRIKRQLEVAERRVKNS YINEAHESLAAKA EREKEANARAAELGRRLDRALEKLESIERKDMILNLETSCARDEEQTFFAE+ELRAHQMDPELYLPVNTAKRRQVARSEKRL RLRLRHESQSAALSQAQATERLHADLRRAAGLGDIPQTMKCLDSGISVNVPDQSGLSAFLYACGQANA+LVQILVDAGGDVLDGDGTITGLIIAARKGT G           VCARDSAGGTALHAATLHRHV+ XXXXXXXXXXXXXXXXXXXXXXXMLASVSSGK+GG D +GGETGA+VAGLLLEWGASADIKN+KGLTPISAALDTRNRAMVLAYREFFGEDSGLAAVDADFDVESNRSDTTPATDNGRLPPE  K ATAVA PTRERNTFSA
Sbjct:  157 MDTDDGRHRALDKDNEARRIKRQLEVAERRVKNSFYINEAHESLAAKATEREKEANARAAELGRRLDRALEKLESIERKDMILNLETSCARDEEQTFFAERELRAHQMDPELYLPVNTAKRRQVARSEKRLRRLRLRHESQSAALSQAQATERLHADLRRAAGLGDIPQTMKCLDSGISVNVPDQSGLSAFLYACGQANAELVQILVDAGGDVLDGDGTITGLIIAARKGTMGVVQTLLEAGADVCARDSAGGTALHAATLHRHVDXXXXXXXXXXXXXXXXXXXXXXXXMLASVSSGKDGGSDVRGGETGADVAGLLLEWGASADIKNSKGLTPISAALDTRNRAMVLAYREFFGEDSGLAAVDADFDVESNRSDTTPATDNGRLPPESPKKATAVADPTRERNTFSA 565

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BLAST of mRNA_E-fasciculatus_F_contig1009.95.1 vs. uniprot
Match: A0A7R9VLG3_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9VLG3_9STRA)

HSP 1 Score: 80.1 bits (196), Expect = 6.790e-14
Identity = 64/191 (33.51%), Postives = 92/191 (48.17%), Query Frame = 1

Query:  472 LRRAAGLGDIPQTMKCLDSGISVNVPDQSGLSAFLYACGQANADLVQILVDAGGDVLDGDGTITGLIIAARKGTSGXXXXXXXXXXXVCARDSAGGTALHAATLHRHVNVXXXXXXXXXXXXXXXXXXXXXXXMLASVSSGKNGGGDGKGGETGAEVAGLLLEWGASADIKNAKGLTPISAALDTRNRAMV 1044
            +R+A+  GD     + ++ G+SVNVPD++G SAF YACG  + D V+++V +  D+ D DG  T LI A R G +            V +RD  G TAL  A    +V+     XXXX                    +       DG+      E+A LLL+ GA A  KNA G+TP+  A   R++ +V
Sbjct:    1 MRQASSRGDTKCIKQLMEQGVSVNVPDKAGFSAFKYACGGGHLDAVRLMVQSA-DLNDADGRTTALIAATRNGHAPVVRFLLEEGADVESRDDGGNTALLIACAGGYVDCARALXXXXKKGGRRGGGADPNAANAVGNAGLHLCARDGR-----EEIASLLLDRGAEAGAKNASGMTPMEIAKARRHQGVV 185

The following BLAST results are available for this feature:

BLAST of mRNA_E-fasciculatus_F_contig1009.95.1 vs. uniprot

BLAST of mRNA_E-fasciculatus_F_contig1009.95.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 2

ZOOM

x 1

POSITION

0


Match Name	E-value	Identity	Description
D7G731_ECTSI	1.230e-224	92.18	Ankyrin n=1 Tax=Ectocarpus siliculosus TaxID=2880 ...	[more]
A0A7R9VLG3_9STRA	6.790e-14	33.51	Hypothetical protein n=1 Tax=Pseudictyota dubia Ta...	[more]

Properties


Property Name	Value
Taxonomic scope	Eukaryota
Seed ortholog score	645.2
Seed ortholog evalue	2.1e-182
Seed eggNOG ortholog	2880.D7G731
EggNOG free text desc.	response to abiotic stimulus
EggNOG OGs	COG0666@1,KOG4177@2759
COG Functional cat.	G
Best tax level	Eukaryota
Best eggNOG OG	NA\|NA\|NA
Hectar predicted targeting category	other localisation
Ec32 ortholog description	Ankyrin repeat-containing domain
Ec32 ortholog	Ec-01_011230.1
Exons	2
Model size	1230
Cds size	1230
Stop	1
Start	1

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at E-fasciculatus_F_contig1009:17298..19020+
coding sequence from alignment at E-fasciculatus_F_contig1009:17298..19020+

protein sequence of mRNA_E-fasciculatus_F_contig1009.95.1

>prot_E-fasciculatus_F_contig1009.95.1 ID=prot_E-fasciculatus_F_contig1009.95.1|Name=mRNA_E-fasciculatus_F_contig1009.95.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=410bp
MDTDDVQHRAQDKDNEARRIKRQLEVAERRVKNSLYINEAHESLAAKANE
REKEANARAAELGRRLDRALEKLESIERKDMILNLETSCARDEEQTFFAE
QELRAHQMDPELYLPVNTAKRRQVARSEKRLHRLRLRHESQSAALSQAQA
TERLHADLRRAAGLGDIPQTMKCLDSGISVNVPDQSGLSAFLYACGQANA
DLVQILVDAGGDVLDGDGTITGLIIAARKGTSGVVQTLLEAGADVCARDS
AGGTALHAATLHRHVNVVRVLLEAGSDWNAIDQGNNTPLHMLASVSSGKN
GGGDGKGGETGAEVAGLLLEWGASADIKNAKGLTPISAALDTRNRAMVLA
YREFFGEDSGLAAVDADFDVESNRSDTTPATDNGRLPPERSKGATAVASP
TRERNTFSA*

mRNA from alignment at E-fasciculatus_F_contig1009:17298..19020+

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_E-fasciculatus_F_contig1009.95.1 ID=mRNA_E-fasciculatus_F_contig1009.95.1|Name=mRNA_E-fasciculatus_F_contig1009.95.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=1723bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1009:17298..19020+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ATGGATACCGACGACGTGCAACATCGTGCGCAAGACAAGGACAACGAAGC
TCGGCGGATCAAACGACAGCTGGAAGTTGCCGAGCGCAGGGTGAAAAACT
CGCTTTACATCAACGAGGCACACGAAAGCTTGGCAGCCAAGGCGAACGAA
AGAGAAAAGGAGGCTAATGCCCGCGCGGCCGAGCTCGGGCGCAGGCTGGA
CCGTGCGCTCGAAAAGCTGGAATCCATCGAGCGCAAGGACATGATACTAA
ACCTCGAAACATCCTGTGCGAGAGACGAGGAACAAACATTTTTCGCCGAA
CAAGAATTACGAGCCCACCAGATGGACCCCGAGCTATACCTGCCGGTCAA
CACTGCCAAGCGACGGCAGGTGGCTCGCTCGGAGAAGCGCCTCCATCGCT
TGCGGCTGCGCCACGAAAGTCAAAGTGCCGCCCTGTCCCAGGCACAAGCG
ACGGAGCGGTTACACGCAGACCTAAGGAGAGCGGCAGGTTTAGGAGACAT
ACCCCAGACGATGAAGTGCTTGGATTCAGGGATCTCAGTGAATGTGCCGG
ATCAGAGTGGACTCTCTGCTTTTCTGTACGCCTGCGGCCAGGCAAATGCT
GACTTGGTTCAAATTTTAGTAGATGCGGGGGGGGATGTCCTTGATGGCGA
TGGCACCATCACGGGGCTCATCATCGCGGCAAGGAAGGTGAGGGTCGGGC
GCAGAAACCTGAACGAAGACCCCATGGGTTCCGGCAACAATTTTTTGTAG
TTCAAAAGGAGTACATAGTTGGACTCCTGTCCTGCTAGAGAACCTGATAT
CGGTCAACAGTGCCGTTCAAGGTGAACAAAGCCTACACACAACGACGTGG
TTCATTTTCCAATATTTGTCGTGCCAAAACGCGGAAAATTGACTCTTGAT
GCCATTCTCGGGGAGGCGTGTGAGTCCTCTATCTACCGCCCGTTCTACTT
CAGGTGTTTGCAAACAGCAACAACAACAGCAGCACCACGTAGCGTAGTAG
ACTAAGTAGCCGTCGCGCCCAAGAACCCCCAAGAACACGTTCTTCCTGCC
ACAAGTTTGTCTGTGGATGGATGCTGCGCATTCTAGACATGAGAAACATA
CAGATTGTGGGCGGCACCACCACCAACGCTACTATTGCTACGACACCCCC
CCCCGCTTTTCCGTCCATCGAACGAAAAAGGGAACCTCGGGAGTGGTCCA
AACGCTACTGGAAGCCGGCGCAGACGTGTGCGCTCGCGATTCAGCAGGAG
GGACCGCCCTTCACGCAGCAACTCTCCATCGGCACGTGAACGTCGTCCGA
GTTTTGCTCGAAGCAGGATCGGACTGGAACGCTATCGACCAGGGCAACAA
CACCCCGCTGCACATGCTAGCGTCGGTATCTTCAGGCAAGAACGGAGGGG
GTGACGGTAAAGGAGGGGAAACGGGTGCCGAGGTCGCCGGTCTGCTCTTG
GAGTGGGGAGCCTCAGCAGACATTAAGAACGCAAAGGGCTTGACTCCGAT
ATCGGCTGCCCTCGACACGAGGAATCGGGCAATGGTACTCGCATACCGAG
AGTTTTTTGGCGAAGACAGCGGCCTTGCGGCTGTTGACGCTGATTTCGAT
GTTGAGAGCAATCGTAGCGATACTACTCCTGCCACGGATAACGGACGGTT
GCCGCCAGAAAGATCCAAGGGGGCCACTGCTGTCGCAAGTCCTACACGCG
AGCGAAACACATTCAGTGCCTGA

Coding sequence (CDS) from alignment at E-fasciculatus_F_contig1009:17298..19020+

>mRNA_E-fasciculatus_F_contig1009.95.1 ID=mRNA_E-fasciculatus_F_contig1009.95.1|Name=mRNA_E-fasciculatus_F_contig1009.95.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=2460bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1009:17298..19020+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ATGGATACCGACGACGTGCAACATCGTGCGCAAGACAAGGACAACGAAGC
TCGGCGGATCAAACGACAGCTGGAAGTTGCCGAGCGCAGGGTGAAAAACT
CGCTTTACATCAACGAGGCACACGAAAGCTTGGCAGCCAAGGCGAACGAA
AGAGAAAAGGAGGCTAATGCCCGCGCGGCCGAGCTCGGGCGCAGGCTGGA
CCGTGCGCTCGAAAAGCTGGAATCCATCGAGCGCAAGGACATGATACTAA
ACCTCGAAACATCCTGTGCGAGAGACGAGGAACAAACATTTTTCGCCGAA
CAAGAATTACGAGCCCACCAGATGGACCCCGAGCTATACCTGCCGGTCAA
CACTGCCAAGCGACGGCAGGTGGCTCGCTCGGAGAAGCGCCTCCATCGCT
TGCGGCTGCGCCACGAAAGTCAAAGTGCCGCCCTGTCCCAGGCACAAGCG
ACGGAGCGGTTACACGCAGACCTAAGGAGAGCGGCAGGTTTAGGAGACAT
ACCCCAGACGATGAAGTGCTTGGATTCAGGGATCTCAGTGAATGTGCCGG
ATCAGAGTGGACTCTCTGCTTTTCTGTACGCCTGCGGCCAGGCAAATGCT
GACTTGGTTCAAATTTTAGTAGATGCGGGGGGGGATGTCCTTGATGGCGA
TGGCACCATCACGGGGCTCATCATCGCGGCAAGGAAGATGGATACCGACG
ACGTGCAACATCGTGCGCAAGACAAGGACAACGAAGCTCGGCGGATCAAA
CGACAGCTGGAAGTTGCCGAGCGCAGGGTGAAAAACTCGCTTTACATCAA
CGAGGCACACGAAAGCTTGGCAGCCAAGGCGAACGAAAGAGAAAAGGAGG
CTAATGCCCGCGCGGCCGAGCTCGGGCGCAGGCTGGACCGTGCGCTCGAA
AAGCTGGAATCCATCGAGCGCAAGGACATGATACTAAACCTCGAAACATC
CTGTGCGAGAGACGAGGAACAAACATTTTTCGCCGAACAAGAATTACGAG
CCCACCAGATGGACCCCGAGCTATACCTGCCGGTCAACACTGCCAAGCGA
CGGCAGGTGGCTCGCTCGGAGAAGCGCCTCCATCGCTTGCGGCTGCGCCA
CGAAAGTCAAAGTGCCGCCCTGTCCCAGGCACAAGCGACGGAGCGGTTAC
ACGCAGACCTAAGGAGAGCGGCAGGTTTAGGAGACATACCCCAGACGATG
AAGTGCTTGGATTCAGGGATCTCAGTGAATGTGCCGGATCAGAGTGGACT
CTCTGCTTTTCTGTACGCCTGCGGCCAGGCAAATGCTGACTTGGTTCAAA
TTTTAGTAGATGCGGGGGGGGATGTCCTTGATGGCGATGGCACCATCACG
GGGCTCATCATCGCGGCAAGGAAGGGAACCTCGGGAGTGGTCCAAACGCT
ACTGGAAGCCGGCGCAGACGTGTGCGCTCGCGATTCAGCAGGAGGGACCG
CCCTTCACGCAGCAACTCTCCATCGGCACGTGAACGTCGTCCGAGTTTTG
CTCGAAGCAGGATCGGACTGGAACGCTATCGACCAGGGCAACAACACCCC
GCTGCACATGCTAGCGTCGGTATCTTCAGGCAAGAACGGAGGGGGTGACG
GTAAAGGAGGGGAAACGGGTGCCGAGGTCGCCGGTCTGCTCTTGGAGTGG
GGAGCCTCAGCAGACATTAAGAACGCAAAGGGCTTGACTCCGATATCGGC
TGCCCTCGACACGAGGAATCGGGCAATGGTACTCGCATACCGAGAGTTTT
TTGGCGAAGACAGCGGCCTTGCGGCTGTTGACGCTGATTTCGATGTTGAG
AGCAATCGTAGCGATACTACTCCTGCCACGGATAACGGACGGTTGCCGCC
AGAAAGATCCAAGGGGGCCACTGCTGTCGCAAGTCCTACACGCGAGCGAA
ACACATTCAGTGCCTGAGGAACCTCGGGAGTGGTCCAAACGCTACTGGAA
GCCGGCGCAGACGTGTGCGCTCGCGATTCAGCAGGAGGGACCGCCCTTCA
CGCAGCAACTCTCCATCGGCACGTGAACGTCGTCCGAGTTTTGCTCGAAG
CAGGATCGGACTGGAACGCTATCGACCAGGGCAACAACACCCCGCTGCAC
ATGCTAGCGTCGGTATCTTCAGGCAAGAACGGAGGGGGTGACGGTAAAGG
AGGGGAAACGGGTGCCGAGGTCGCCGGTCTGCTCTTGGAGTGGGGAGCCT
CAGCAGACATTAAGAACGCAAAGGGCTTGACTCCGATATCGGCTGCCCTC
GACACGAGGAATCGGGCAATGGTACTCGCATACCGAGAGTTTTTTGGCGA
AGACAGCGGCCTTGCGGCTGTTGACGCTGATTTCGATGTTGAGAGCAATC
GTAGCGATACTACTCCTGCCACGGATAACGGACGGTTGCCGCCAGAAAGA
TCCAAGGGGGCCACTGCTGTCGCAAGTCCTACACGCGAGCGAAACACATT
CAGTGCCTGA