prot_E_fasciculatus_S2_contig985.17854.1 (polypeptide) Ectocarpus fasciculatus EfasUO2

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E_fasciculatus_S2_contig985.17854.1
Unique Nameprot_E_fasciculatus_S2_contig985.17854.1
Typepolypeptide
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Sequence length237
Homology
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BLAST of mRNA_E_fasciculatus_S2_contig985.17854.1 vs. uniprot
Match: A0A6H5JXK1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXK1_9PHAE)

HSP 1 Score: 385 bits (990), Expect = 1.080e-129
Identity = 219/237 (92.41%), Postives = 223/237 (94.09%), Query Frame = 0 
Query:    1 SCRDGFLWRTRSYLRAWDRGIAVVVRVSSXXXXXXXXXXXXXXXXXXXLAAAEPSGRLCEGVELLETALGVAEGSLPPAQFQQFWTALASEVDLTLVKQIVARRVEMTQDEGLQLLADLKVLMGPFDSLTRRRPERHFPALAEAAVLLSLEKSQLRSLSSGLDAHGGGVEEAVRGVGWDGWREEGGALSPEGTQMRDMLENVGVRRLGPAEASILLDKRLKGDRLAVLGYLSAAAGE 237
            SC DGFLWRTRSYLRAWDRGIAVVV  S XXXXXXXXXXXXXXXXX    AAEPSGRLCEGV+LLETALGVAEG LPP QFQQFWTALAS +DLTLVKQIVARRVEMTQDEGLQLLADLKVLMGPFDSL RRRPERHFPALAEAAVLLSLEKSQLRSLSSGLDAHGG VEEAVRG GWDGWREEGGALSPEGTQMRDMLENVGVRR+GPAEASILLDKRLKGDRLAVLGYLSAAAG+
Sbjct:  242 SCLDGFLWRTRSYLRAWDRGIAVVVHASXXXXXXXXXXXXXXXXXXSF--AAEPSGRLCEGVQLLETALGVAEGCLPPGQFQQFWTALASGLDLTLVKQIVARRVEMTQDEGLQLLADLKVLMGPFDSLARRRPERHFPALAEAAVLLSLEKSQLRSLSSGLDAHGGSVEEAVRGGGWDGWREEGGALSPEGTQMRDMLENVGVRRMGPAEASILLDKRLKGDRLAVLGYLSAAAGK 476
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BLAST of mRNA_E_fasciculatus_S2_contig985.17854.1 vs. uniprot
Match: D8LBJ7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBJ7_ECTSI)

HSP 1 Score: 379 bits (972), Expect = 7.200e-121
Identity = 224/263 (85.17%), Postives = 228/263 (86.69%), Query Frame = 0 
Query:    1 SCRDGFLWRTRSYLRAWDRGIAVVVRVSSXXXXXXXXXXXXXXXXXXXLAAAEPSGRLCEGVELLETALGVAEGSLPPAQFQQFWTALASEVDLTLVKQIVARRVEMTQDEGLQLLADLKVLMGPFDSLTRRRPERHFPALAEAAVLLSLEK--------------------------SQLRSLSSGLDAHGGGVEEAVRGVGWDGWREEGGALSPEGTQMRDMLENVGVRRLGPAEASILLDKRLKGDRLAVLGYLSAAAGE 237
            SCRDGFLWRTRSYLRAWDRGIAVVVR  +XXXXXXXXXXXXXXXXXXX   AEPSGRLCEGVELLETALGVAEG LPP QFQQFWTALASE+DLTLVKQIVARRVEM+QDEGLQLLADLKVLMGPFDSL RRRPERHFPALAEAAVLLSLEK                          SQLRSLSSGLDAHGGGVEEAVRG GWDGWREEGGALSPEGTQMRDMLENVGVRR+GPAEASILLDKRLKGDRLAVLGYLSAAAGE
Sbjct:  795 SCRDGFLWRTRSYLRAWDRGIAVVVR--AXXXXXXXXXXXXXXXXXXXXXXAEPSGRLCEGVELLETALGVAEGCLPPGQFQQFWTALASELDLTLVKQIVARRVEMSQDEGLQLLADLKVLMGPFDSLARRRPERHFPALAEAAVLLSLEKDGRTHARKGMNTTKRTLHIEGSLFAQSQLRSLSSGLDAHGGGVEEAVRGGGWDGWREEGGALSPEGTQMRDMLENVGVRRMGPAEASILLDKRLKGDRLAVLGYLSAAAGE 1055
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BLAST of mRNA_E_fasciculatus_S2_contig985.17854.1 vs. uniprot
Match: UPI001ED86F44 (RAD50-interacting protein 1 n=1 Tax=Ischnura elegans TaxID=197161 RepID=UPI001ED86F44)

HSP 1 Score: 56.6 bits (135), Expect = 1.220e-5
Identity = 47/167 (28.14%), Postives = 72/167 (43.11%), Query Frame = 0 
Query:   59 CEGVELLETALGVAEGSLPPAQFQQFWTALASEVDLTLVKQIVARRVEMTQDEGLQLLADLKVLMGPFDSLTRRRPERHFPALAEAAVLLSLEKSQLRSLSSGLD---AHGGGVEEAVRGVGWDGWREEGGALSPEGTQMRD---MLENVGVRRLGPAEASILLDKR 219
            C   E+L   L   + +L      Q W  L S+++  L ++++       +   LQL  D+   + P  S    +PE HF  + E   LL++ K     L   LD     G   EE           EEG A   +GT +R    +L  +GV +L P+EA ++LD R
Sbjct:  674 CPMFEVLSEHLHWLKDTLSIHLLSQAWQILCSDLNKFLYQKLILVN-NFNEGGALQLQFDMTRNLFPLFSQFTEKPENHFKEIKEVCFLLTISKGSALLLREALDFPNRQGSSSEED----------EEGTAKQKDGTSLRGPARVLAEMGVHKLTPSEAKVILDLR 829
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig985.17854.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5JXK1_9PHAE1.080e-12992.41Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LBJ7_ECTSI7.200e-12185.17Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
UPI001ED86F441.220e-528.14RAD50-interacting protein 1 n=1 Tax=Ischnura elega... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007528RINT-1/Tip20PFAMPF04437RINT1_TIP1coord: 48..219
e-value: 5.5E-10
score: 38.7
IPR007528RINT-1/Tip20PANTHERPTHR13520RAD50-INTERACTING PROTEIN 1 RINT-1coord: 37..220

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig985contigE_fasciculatus_S2_contig985:309..4551 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO22022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig985.17854.1mRNA_E_fasciculatus_S2_contig985.17854.1Ectocarpus fasciculatus EfasUO2mRNAE_fasciculatus_S2_contig985 309..4553 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E_fasciculatus_S2_contig985.17854.1 ID=prot_E_fasciculatus_S2_contig985.17854.1|Name=mRNA_E_fasciculatus_S2_contig985.17854.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=237bp
SCRDGFLWRTRSYLRAWDRGIAVVVRVSSSAAATASSALPGGPSSSSSLA
AAEPSGRLCEGVELLETALGVAEGSLPPAQFQQFWTALASEVDLTLVKQI
VARRVEMTQDEGLQLLADLKVLMGPFDSLTRRRPERHFPALAEAAVLLSL
EKSQLRSLSSGLDAHGGGVEEAVRGVGWDGWREEGGALSPEGTQMRDMLE
NVGVRRLGPAEASILLDKRLKGDRLAVLGYLSAAAGE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007528RINT1_Tip20