Homology
BLAST of mRNA_E_fasciculatus_S2_contig985.17854.1 vs. uniprot
Match:
A0A6H5JXK1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXK1_9PHAE)
HSP 1 Score: 385 bits (990), Expect = 1.080e-129
Identity = 219/237 (92.41%), Postives = 223/237 (94.09%), Query Frame = 0
Query: 1 SCRDGFLWRTRSYLRAWDRGIAVVVRVSSXXXXXXXXXXXXXXXXXXXLAAAEPSGRLCEGVELLETALGVAEGSLPPAQFQQFWTALASEVDLTLVKQIVARRVEMTQDEGLQLLADLKVLMGPFDSLTRRRPERHFPALAEAAVLLSLEKSQLRSLSSGLDAHGGGVEEAVRGVGWDGWREEGGALSPEGTQMRDMLENVGVRRLGPAEASILLDKRLKGDRLAVLGYLSAAAGE 237
SC DGFLWRTRSYLRAWDRGIAVVV S XXXXXXXXXXXXXXXXX AAEPSGRLCEGV+LLETALGVAEG LPP QFQQFWTALAS +DLTLVKQIVARRVEMTQDEGLQLLADLKVLMGPFDSL RRRPERHFPALAEAAVLLSLEKSQLRSLSSGLDAHGG VEEAVRG GWDGWREEGGALSPEGTQMRDMLENVGVRR+GPAEASILLDKRLKGDRLAVLGYLSAAAG+
Sbjct: 242 SCLDGFLWRTRSYLRAWDRGIAVVVHASXXXXXXXXXXXXXXXXXXSF--AAEPSGRLCEGVQLLETALGVAEGCLPPGQFQQFWTALASGLDLTLVKQIVARRVEMTQDEGLQLLADLKVLMGPFDSLARRRPERHFPALAEAAVLLSLEKSQLRSLSSGLDAHGGSVEEAVRGGGWDGWREEGGALSPEGTQMRDMLENVGVRRMGPAEASILLDKRLKGDRLAVLGYLSAAAGK 476
BLAST of mRNA_E_fasciculatus_S2_contig985.17854.1 vs. uniprot
Match:
D8LBJ7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBJ7_ECTSI)
HSP 1 Score: 379 bits (972), Expect = 7.200e-121
Identity = 224/263 (85.17%), Postives = 228/263 (86.69%), Query Frame = 0
Query: 1 SCRDGFLWRTRSYLRAWDRGIAVVVRVSSXXXXXXXXXXXXXXXXXXXLAAAEPSGRLCEGVELLETALGVAEGSLPPAQFQQFWTALASEVDLTLVKQIVARRVEMTQDEGLQLLADLKVLMGPFDSLTRRRPERHFPALAEAAVLLSLEK--------------------------SQLRSLSSGLDAHGGGVEEAVRGVGWDGWREEGGALSPEGTQMRDMLENVGVRRLGPAEASILLDKRLKGDRLAVLGYLSAAAGE 237
SCRDGFLWRTRSYLRAWDRGIAVVVR +XXXXXXXXXXXXXXXXXXX AEPSGRLCEGVELLETALGVAEG LPP QFQQFWTALASE+DLTLVKQIVARRVEM+QDEGLQLLADLKVLMGPFDSL RRRPERHFPALAEAAVLLSLEK SQLRSLSSGLDAHGGGVEEAVRG GWDGWREEGGALSPEGTQMRDMLENVGVRR+GPAEASILLDKRLKGDRLAVLGYLSAAAGE
Sbjct: 795 SCRDGFLWRTRSYLRAWDRGIAVVVR--AXXXXXXXXXXXXXXXXXXXXXXAEPSGRLCEGVELLETALGVAEGCLPPGQFQQFWTALASELDLTLVKQIVARRVEMSQDEGLQLLADLKVLMGPFDSLARRRPERHFPALAEAAVLLSLEKDGRTHARKGMNTTKRTLHIEGSLFAQSQLRSLSSGLDAHGGGVEEAVRGGGWDGWREEGGALSPEGTQMRDMLENVGVRRMGPAEASILLDKRLKGDRLAVLGYLSAAAGE 1055
BLAST of mRNA_E_fasciculatus_S2_contig985.17854.1 vs. uniprot
Match:
UPI001ED86F44 (RAD50-interacting protein 1 n=1 Tax=Ischnura elegans TaxID=197161 RepID=UPI001ED86F44)
HSP 1 Score: 56.6 bits (135), Expect = 1.220e-5
Identity = 47/167 (28.14%), Postives = 72/167 (43.11%), Query Frame = 0
Query: 59 CEGVELLETALGVAEGSLPPAQFQQFWTALASEVDLTLVKQIVARRVEMTQDEGLQLLADLKVLMGPFDSLTRRRPERHFPALAEAAVLLSLEKSQLRSLSSGLD---AHGGGVEEAVRGVGWDGWREEGGALSPEGTQMRD---MLENVGVRRLGPAEASILLDKR 219
C E+L L + +L Q W L S+++ L ++++ + LQL D+ + P S +PE HF + E LL++ K L LD G EE EEG A +GT +R +L +GV +L P+EA ++LD R
Sbjct: 674 CPMFEVLSEHLHWLKDTLSIHLLSQAWQILCSDLNKFLYQKLILVN-NFNEGGALQLQFDMTRNLFPLFSQFTEKPENHFKEIKEVCFLLTISKGSALLLREALDFPNRQGSSSEED----------EEGTAKQKDGTSLRGPARVLAEMGVHKLTPSEAKVILDLR 829
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig985.17854.1 vs. uniprot
Analysis Date: 2022-09-16 (
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90 )
Total hits: 3
S C R D G F L W R T R S Y L R A W D R G I A V V V R V S S S A A A T A S S A L P G G P S S S S S L A A A E P S G R L C E G V E L L E T A L G V A E G S L P P A Q F Q Q F W T A L A S E V D L T L V K Q I V A R R V E M T Q D E G L Q L L A D L K V L M G P F D S L T R R R P E R H F P A L A E A A V L L S L E K S Q L R S L S S G L D A H G G G V E E A V R G V G W D G W R E E G G A L S P E G T Q M R D M L E N V G V R R L G P A E A S I L L D K R L K G D R L A V L G Y L S A A A G E 20 40 60 80 100 120 140 160 180 200 220 Expect = 1.08e-129 / Id = 92.41 Expect = 7.20e-121 / Id = 85.17 Expect = 1.22e-5 / Id = 28.14 Sequence A0A6H5JXK1_9PHAE D8LBJ7_ECTSI UPI001ED86F44
Match Name E-value Identity Description
A0A6H5JXK1_9PHAE 1.080e-129 92.41 Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more] D8LBJ7_ECTSI 7.200e-121 85.17 Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more] UPI001ED86F44 1.220e-5 28.14 RAD50-interacting protein 1 n=1 Tax=Ischnura elega... [more]
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InterPro
Analysis Name:
InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2
Date Performed: 2022-09-29
S C R D G F L W R T R S Y L R A W D R G I A V V V R V S S S A A A T A S S A L P G G P S S S S S L A A A E P S G R L C E G V E L L E T A L G V A E G S L P P A Q F Q Q F W T A L A S E V D L T L V K Q I V A R R V E M T Q D E G L Q L L A D L K V L M G P F D S L T R R R P E R H F P A L A E A A V L L S L E K S Q L R S L S S G L D A H G G G V E E A V R G V G W D G W R E E G G A L S P E G T Q M R D M L E N V G V R R L G P A E A S I L L D K R L K G D R L A V L G Y L S A A A G E 20 40 60 80 100 120 140 160 180 200 220 Expect = 5.5E-10 / Score = 38.7 Score = Sequence PF04437 PTHR13520
IPR Term IPR Description Source Source Term Source Description Alignment
IPR007528 RINT-1/Tip20 PFAM PF04437 RINT1_TIP1 coord: 48..219 IPR007528 RINT-1/Tip20 PANTHER PTHR13520 RAD50-INTERACTING PROTEIN 1 RINT-1 coord: 37..220
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence
>prot_E_fasciculatus_S2_contig985.17854.1 ID=prot_E_fasciculatus_S2_contig985.17854.1|Name=mRNA_E_fasciculatus_S2_contig985.17854.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=237bp back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
Term Definition
IPR007528 RINT1_Tip20