prot_E_fasciculatus_S2_contig9631.17642.1 (polypeptide) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig9631.17642.1 vs. uniprot
Match: D8LFT0_ECTSI (TFIIH subunit (Partial) (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFT0_ECTSI) HSP 1 Score: 505 bits (1300), Expect = 1.100e-173 Identity = 273/280 (97.50%), Postives = 275/280 (98.21%), Query Frame = 0
Query: 1 MSVPGPSLGAGEEVVMTAHAVHKKTPGTVWFTSRRALWKAADGKAAVQRVEVAWAAVKSFQCSPASEARAMMRLLRVTEGQPPIIFRFTETPGGTPREVLERAQAAVRKALKGDAGAGKSKTGVAEGGGAKGTGKGKAGKDGGSS-KDALKKMKWKTRGGLLGTASGGQSLRHRDSMPGGRMRDVHDARQRAALLAGDEVLTAQYREMVDGAVVTEEEFWESRRRTLAEEDAKTASRHTGTPSEMPSDLVAETTSTGTLKFKLNARTIHSIFTMYPIVFK 279
MSVPGPSLGAGEEVVMTAHAVHKKTPGTVWFTSRRALWKAADGKAAVQRVEVAWAAVKSFQCSPASEARAMMRLLRVTEGQPPIIFRFTETPGGTPREVLERAQAAVRKALKGDAGAG+SKTGVAEGG GTGKGKAGK GGSS KDALKKMKWKTRGGLLGTASGGQSLRHRDSMPGGRMR+VHDARQRAALLAGDEVLTAQYREMVDGAVVTEEEFWESRRRTLAEEDAKTASRHTGTPSEMPSDLVAETTSTGTLKFKLNARTIHSIFTMYPIVFK
Sbjct: 1 MSVPGPSLGAGEEVVMTAHAVHKKTPGTVWFTSRRALWKAADGKAAVQRVEVAWAAVKSFQCSPASEARAMMRLLRVTEGQPPIIFRFTETPGGTPREVLERAQAAVRKALKGDAGAGRSKTGVAEGG-TNGTGKGKAGKYGGSSSKDALKKMKWKTRGGLLGTASGGQSLRHRDSMPGGRMRNVHDARQRAALLAGDEVLTAQYREMVDGAVVTEEEFWESRRRTLAEEDAKTASRHTGTPSEMPSDLVAETTSTGTLKFKLNARTIHSIFTMYPIVFK 279
BLAST of mRNA_E_fasciculatus_S2_contig9631.17642.1 vs. uniprot
Match: A0A6H5JXC6_9PHAE (BSD domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXC6_9PHAE) HSP 1 Score: 361 bits (927), Expect = 6.970e-118 Identity = 199/209 (95.22%), Postives = 202/209 (96.65%), Query Frame = 0
Query: 71 MMRLLRVTEGQPPIIFRFTETPGGTPREVLERAQAAVRKALKGDAGAGKSKTGVAEGGGAKGTGKGKAGKDGGSSKDALKKMKWKTRGGLLGTASGGQSLRHRDSMPGGRMRDVHDARQRAALLAGDEVLTAQYREMVDGAVVTEEEFWESRRRTLAEEDAKTASRHTGTPSEMPSDLVAETTSTGTLKFKLNARTIHSIFTMYPIVFK 279
MMRLLRVTEGQPPIIFRFTETPGGTPREVLERAQAAVRKALKGDAGAG+ +TGVAEGG G GKGKAGKDGGSSK+ALKKMKWKTRGGLLGTASGGQSLRH SMPGGRMRDVHDARQRAALLAGDEVLTAQYREMVDGAVVTEEEFWESRRRTLAEEDAKTASRHTGTPSEMPSDLVAETTSTGTLKFKLNARTIHSIFTMYPIVFK
Sbjct: 1 MMRLLRVTEGQPPIIFRFTETPGGTPREVLERAQAAVRKALKGDAGAGRIRTGVAEGG-TNGAGKGKAGKDGGSSKNALKKMKWKTRGGLLGTASGGQSLRH--SMPGGRMRDVHDARQRAALLAGDEVLTAQYREMVDGAVVTEEEFWESRRRTLAEEDAKTASRHTGTPSEMPSDLVAETTSTGTLKFKLNARTIHSIFTMYPIVFK 206
BLAST of mRNA_E_fasciculatus_S2_contig9631.17642.1 vs. uniprot
Match: A0A835YZ40_9STRA (BSD domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZ40_9STRA) HSP 1 Score: 72.4 bits (176), Expect = 1.310e-10 Identity = 73/248 (29.44%), Postives = 114/248 (45.97%), Query Frame = 0
Query: 52 VAWAAVKSFQCSPASEARAMMRLLRVTEGQPPIIFRFTETPGGTPREVLERAQAAVRKALKGDAGA-------------------GKSKTGVAEGGGAKGTGKGKAGKDGGSSKDALKKMKWKTRGGLLGTASGGQSLRHRDSMPGGRMRDVHDA---RQRAALLAGDEVLTAQYREMVDGAVVTEEEFWESRRRTLAEEDAKTASRHTGTPSEMPSDLVAETTSTGTLKFKLNARTIHSIFTMYPIV 277
+AW+ VK SPA+ A+AM+++ + P++ + ++ T ++L A++ + K L+ AG+ GK+K+ +GG G G+ + +T G L G +GG++L P A ++RAALLA D VL AQY ++V+G V+++ EFW RR L E A +R G S + +D V F+L R IH IF MYP V
Sbjct: 1 MAWSLVKDHMVSPATSAKAMIKVNPTSSAVDPMVIQVLDSGLATAADILATARSTILKVLRSYAGSSXXXXXXXXXXXXXXXXXXGKAKSLNGDGG---------EGAPRGAQSWGAGHKRQRTAGPLSG--AGGRALDAAAVQPPAXXXXXXAADVAQRRAALLARDAVLRAQYADVVEGGVLSDAEFWAGRRGMLEGEAAAARARRQGARSALGAD-VRPAVEGAKQVFRLTPRDIHQIFLMYPAV 236
BLAST of mRNA_E_fasciculatus_S2_contig9631.17642.1 vs. uniprot
Match: A0A2P4XBN0_9STRA (General transcription factor IIH subunit (Fragment) n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XBN0_9STRA) HSP 1 Score: 68.6 bits (166), Expect = 1.730e-9 Identity = 39/93 (41.94%), Postives = 57/93 (61.29%), Query Frame = 0
Query: 186 DARQRAALLAGDEVLTAQYREMVDGAVVTEEEFWESRRRTLAEEDAKTASRHTGTPSEMPSDLVAETTSTGTLKFKLNARTIHSIFTMYPIVF 278
+ +QRAALLA + L Q+ EMV+ +++EE+FW SRR +A E +K + TG S + +DL A+ +K+ LNA IH IF YP V+
Sbjct: 123 EIKQRAALLAANPALKRQHTEMVNDGLISEEDFWASRRHLIAGEASKR--QKTGKTSAILTDLAADNEGGNVVKYNLNAEVIHQIFIQYPAVY 213
BLAST of mRNA_E_fasciculatus_S2_contig9631.17642.1 vs. uniprot
Match: A0A421FK41_9STRA (BSD domain-containing protein n=2 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A421FK41_9STRA) HSP 1 Score: 67.4 bits (163), Expect = 5.100e-9 Identity = 40/94 (42.55%), Postives = 59/94 (62.77%), Query Frame = 0
Query: 186 DARQRAALLAGDEVLTAQYREMVDGAVVTEEEFWESRRRTLAEEDAKTASRHTGTPSEMPSDLVAETTSTGTL-KFKLNARTIHSIFTMYPIVF 278
+ +QRAALLA + L Q+ EMV+ +++EE+FW SRR +A E +K + TG S + +DL A+ + G + K+ LNA IH IF YP V+
Sbjct: 102 EIKQRAALLAANPALKRQHTEMVNDGLISEEDFWASRRHLIAGEASKR--QKTGKTSAILTDLAADNDAAGNVVKYNLNAEVIHQIFIQYPAVY 193
BLAST of mRNA_E_fasciculatus_S2_contig9631.17642.1 vs. uniprot
Match: A0A3F2RJ52_9STRA (BSD domain-containing protein n=1 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RJ52_9STRA) HSP 1 Score: 67.4 bits (163), Expect = 5.990e-9 Identity = 40/94 (42.55%), Postives = 59/94 (62.77%), Query Frame = 0
Query: 186 DARQRAALLAGDEVLTAQYREMVDGAVVTEEEFWESRRRTLAEEDAKTASRHTGTPSEMPSDLVAETTSTGTL-KFKLNARTIHSIFTMYPIVF 278
+ +QRAALLA + L Q+ EMV+ +++EE+FW SRR +A E +K + TG S + +DL A+ + G + K+ LNA IH IF YP V+
Sbjct: 123 EIKQRAALLAANPALKRQHTEMVNDGLISEEDFWASRRHLIAGEASKR--QKTGKTSAILTDLAADNDAAGNVVKYNLNAEVIHQIFIQYPAVY 214
BLAST of mRNA_E_fasciculatus_S2_contig9631.17642.1 vs. uniprot
Match: M4B6V9_HYAAE (BSD domain-containing protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4B6V9_HYAAE) HSP 1 Score: 67.0 bits (162), Expect = 7.000e-9 Identity = 41/93 (44.09%), Postives = 58/93 (62.37%), Query Frame = 0
Query: 186 DARQRAALLAGDEVLTAQYREMVDGAVVTEEEFWESRRRTLAEEDAKTASRHTGTPSEMPSDLVAETTSTGTL-KFKLNARTIHSIFTMYPIV 277
+ +QRAALLA + L Q+ EMV+ +++EE+FW SRR +A E +K + TG S + +DL AE + G + K+ LNA IH IF YP V
Sbjct: 120 EIKQRAALLAANPTLKRQHMEMVNDGLISEEDFWASRRHLIAGEASKR--QKTGKTSAILTDLAAENDAGGNVVKYNLNAEVIHQIFIQYPAV 210
BLAST of mRNA_E_fasciculatus_S2_contig9631.17642.1 vs. uniprot
Match: A0A0P1APW3_PLAHL (General transcription factor iih n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1APW3_PLAHL) HSP 1 Score: 67.0 bits (162), Expect = 7.040e-9 Identity = 41/94 (43.62%), Postives = 58/94 (61.70%), Query Frame = 0
Query: 186 DARQRAALLAGDEVLTAQYREMVDGAVVTEEEFWESRRRTLAEEDAKTASRHTGTPSEMPSDLVAETTSTGTL-KFKLNARTIHSIFTMYPIVF 278
+ +QRAALLA + L Q+ EMV+ +++EE+FW SRR +A E +K + T S + +DL A S G + K+ LNA IH IFT YP V+
Sbjct: 124 EIKQRAALLAANPALKRQHTEMVNDGLISEEDFWASRRHLIAGEASKR--QKTAKTSAILTDLAANNDSGGNVVKYNLNAEVIHQIFTQYPAVY 215
BLAST of mRNA_E_fasciculatus_S2_contig9631.17642.1 vs. uniprot
Match: A0A2D4CGY8_PYTIN (General transcription factor IIH subunit, putative n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CGY8_PYTIN) HSP 1 Score: 66.6 bits (161), Expect = 9.440e-9 Identity = 42/108 (38.89%), Postives = 64/108 (59.26%), Query Frame = 0
Query: 171 RHRDSMPGGRMRDVHDARQRAALLAGDEVLTAQYREMVDGAVVTEEEFWESRRRTLAEEDAKTASRHTGTPSEMPSDLVAETTSTGTL-KFKLNARTIHSIFTMYPIV 277
RHR + + + + + RAALLA + L Q+ EMV+ +++EE+FW +RR +A E +K + TG S + +DL A++ S G + K+ LNA IH IF YP V
Sbjct: 113 RHRSASDRTPLCNAAEIKHRAALLASNATLKRQHTEMVNQGLISEEDFWATRRHLIANEASKR--QKTGKTSAILTDLTADSESGGNVVKYNLNAEVIHQIFIQYPAV 218
BLAST of mRNA_E_fasciculatus_S2_contig9631.17642.1 vs. uniprot
Match: A0A662X0X0_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662X0X0_9STRA) HSP 1 Score: 65.5 bits (158), Expect = 2.350e-8 Identity = 39/94 (41.49%), Postives = 58/94 (61.70%), Query Frame = 0
Query: 186 DARQRAALLAGDEVLTAQYREMVDGAVVTEEEFWESRRRTLAEEDAKTASRHTGTPSEMPSDLVAETTSTGTL-KFKLNARTIHSIFTMYPIVF 278
+ +QRAALLA + L Q+ EMV+ +++EE+FW SRR +A E +K + TG S + +DL + + G + K+ LNA IH IF YP V+
Sbjct: 150 EIKQRAALLAANPTLKRQHTEMVNDGLISEEDFWASRRHLIAAEASKR--QKTGKTSAILTDLAGDNDTGGNVVKYNLNAEVIHQIFIQYPAVY 241 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig9631.17642.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 18
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_E_fasciculatus_S2_contig9631.17642.1 ID=prot_E_fasciculatus_S2_contig9631.17642.1|Name=mRNA_E_fasciculatus_S2_contig9631.17642.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=280bpback to top |