mRNA_E_fasciculatus_S2_contig9631.17642.1 (mRNA) Ectocarpus fasciculatus EfasUO2

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E_fasciculatus_S2_contig9631.17642.1
Unique NamemRNA_E_fasciculatus_S2_contig9631.17642.1
TypemRNA
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Homology
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BLAST of mRNA_E_fasciculatus_S2_contig9631.17642.1 vs.
Match: TFIIH (subunit (Partial) (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFT0_ECTSI)

HSP 1 Score: 505 bits (1300), Expect = 1.100e-173
Identity = 273/280 (97.50%), Postives = 275/280 (98.21%), Query Frame = 1 
Query:    1 MSVPGPSLGAGEEVVMTAHAVHKKTPGTVWFTSRRALWKAADGKAAVQRVEVAWAAVKSFQCSPASEARAMMRLLRVTEGQPPIIFRFTETPGGTPREVLERAQAAVRKALKGDAGAGKSKTGVAEGGGAKGTGKGKAGKDGGSS-KDALKKMKWKTRGGLLGTASGGQSLRHRDSMPGGRMRDVHDARQRAALLAGDEVLTAQYREMVDGAVVTEEEFWESRRRTLAEEDAKTASRHTGTPSEMPSDLVAETTSTGTLKFKLNARTIHSIFTMYPIVFK 837
            MSVPGPSLGAGEEVVMTAHAVHKKTPGTVWFTSRRALWKAADGKAAVQRVEVAWAAVKSFQCSPASEARAMMRLLRVTEGQPPIIFRFTETPGGTPREVLERAQAAVRKALKGDAGAG+SKTGVAEGG   GTGKGKAGK GGSS KDALKKMKWKTRGGLLGTASGGQSLRHRDSMPGGRMR+VHDARQRAALLAGDEVLTAQYREMVDGAVVTEEEFWESRRRTLAEEDAKTASRHTGTPSEMPSDLVAETTSTGTLKFKLNARTIHSIFTMYPIVFK
Sbjct:    1 MSVPGPSLGAGEEVVMTAHAVHKKTPGTVWFTSRRALWKAADGKAAVQRVEVAWAAVKSFQCSPASEARAMMRLLRVTEGQPPIIFRFTETPGGTPREVLERAQAAVRKALKGDAGAGRSKTGVAEGG-TNGTGKGKAGKYGGSSSKDALKKMKWKTRGGLLGTASGGQSLRHRDSMPGGRMRNVHDARQRAALLAGDEVLTAQYREMVDGAVVTEEEFWESRRRTLAEEDAKTASRHTGTPSEMPSDLVAETTSTGTLKFKLNARTIHSIFTMYPIVFK 279
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BLAST of mRNA_E_fasciculatus_S2_contig9631.17642.1 vs.
Match: BSD (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXC6_9PHAE)

HSP 1 Score: 361 bits (927), Expect = 6.970e-118
Identity = 199/209 (95.22%), Postives = 202/209 (96.65%), Query Frame = 1 
Query:  211 MMRLLRVTEGQPPIIFRFTETPGGTPREVLERAQAAVRKALKGDAGAGKSKTGVAEGGGAKGTGKGKAGKDGGSSKDALKKMKWKTRGGLLGTASGGQSLRHRDSMPGGRMRDVHDARQRAALLAGDEVLTAQYREMVDGAVVTEEEFWESRRRTLAEEDAKTASRHTGTPSEMPSDLVAETTSTGTLKFKLNARTIHSIFTMYPIVFK 837
            MMRLLRVTEGQPPIIFRFTETPGGTPREVLERAQAAVRKALKGDAGAG+ +TGVAEGG   G GKGKAGKDGGSSK+ALKKMKWKTRGGLLGTASGGQSLRH  SMPGGRMRDVHDARQRAALLAGDEVLTAQYREMVDGAVVTEEEFWESRRRTLAEEDAKTASRHTGTPSEMPSDLVAETTSTGTLKFKLNARTIHSIFTMYPIVFK
Sbjct:    1 MMRLLRVTEGQPPIIFRFTETPGGTPREVLERAQAAVRKALKGDAGAGRIRTGVAEGG-TNGAGKGKAGKDGGSSKNALKKMKWKTRGGLLGTASGGQSLRH--SMPGGRMRDVHDARQRAALLAGDEVLTAQYREMVDGAVVTEEEFWESRRRTLAEEDAKTASRHTGTPSEMPSDLVAETTSTGTLKFKLNARTIHSIFTMYPIVFK 206
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BLAST of mRNA_E_fasciculatus_S2_contig9631.17642.1 vs.
Match: BSD (domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZ40_9STRA)

HSP 1 Score: 72.4 bits (176), Expect = 1.310e-10
Identity = 73/248 (29.44%), Postives = 114/248 (45.97%), Query Frame = 1 
Query:  154 VAWAAVKSFQCSPASEARAMMRLLRVTEGQPPIIFRFTETPGGTPREVLERAQAAVRKALKGDAGA-------------------GKSKTGVAEGGGAKGTGKGKAGKDGGSSKDALKKMKWKTRGGLLGTASGGQSLRHRDSMPGGRMRDVHDA---RQRAALLAGDEVLTAQYREMVDGAVVTEEEFWESRRRTLAEEDAKTASRHTGTPSEMPSDLVAETTSTGTLKFKLNARTIHSIFTMYPIV 831
            +AW+ VK    SPA+ A+AM+++   +    P++ +  ++   T  ++L  A++ + K L+  AG+                   GK+K+   +GG          G   G+        + +T G L G  +GG++L      P         A   ++RAALLA D VL AQY ++V+G V+++ EFW  RR  L  E A   +R  G  S + +D V          F+L  R IH IF MYP V
Sbjct:    1 MAWSLVKDHMVSPATSAKAMIKVNPTSSAVDPMVIQVLDSGLATAADILATARSTILKVLRSYAGSSXXXXXXXXXXXXXXXXXXGKAKSLNGDGG---------EGAPRGAQSWGAGHKRQRTAGPLSG--AGGRALDAAAVQPPAXXXXXXAADVAQRRAALLARDAVLRAQYADVVEGGVLSDAEFWAGRRGMLEGEAAAARARRQGARSALGAD-VRPAVEGAKQVFRLTPRDIHQIFLMYPAV 236
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BLAST of mRNA_E_fasciculatus_S2_contig9631.17642.1 vs.
Match: General (transcription factor IIH subunit (Fragment) n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XBN0_9STRA)

HSP 1 Score: 68.6 bits (166), Expect = 1.730e-9
Identity = 39/93 (41.94%), Postives = 57/93 (61.29%), Query Frame = 1 
Query:  556 DARQRAALLAGDEVLTAQYREMVDGAVVTEEEFWESRRRTLAEEDAKTASRHTGTPSEMPSDLVAETTSTGTLKFKLNARTIHSIFTMYPIVF 834
            + +QRAALLA +  L  Q+ EMV+  +++EE+FW SRR  +A E +K   + TG  S + +DL A+      +K+ LNA  IH IF  YP V+
Sbjct:  123 EIKQRAALLAANPALKRQHTEMVNDGLISEEDFWASRRHLIAGEASKR--QKTGKTSAILTDLAADNEGGNVVKYNLNAEVIHQIFIQYPAVY 213
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BLAST of mRNA_E_fasciculatus_S2_contig9631.17642.1 vs.
Match: BSD (domain-containing protein n=2 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A421FK41_9STRA)

HSP 1 Score: 67.4 bits (163), Expect = 5.100e-9
Identity = 40/94 (42.55%), Postives = 59/94 (62.77%), Query Frame = 1 
Query:  556 DARQRAALLAGDEVLTAQYREMVDGAVVTEEEFWESRRRTLAEEDAKTASRHTGTPSEMPSDLVAETTSTGTL-KFKLNARTIHSIFTMYPIVF 834
            + +QRAALLA +  L  Q+ EMV+  +++EE+FW SRR  +A E +K   + TG  S + +DL A+  + G + K+ LNA  IH IF  YP V+
Sbjct:  102 EIKQRAALLAANPALKRQHTEMVNDGLISEEDFWASRRHLIAGEASKR--QKTGKTSAILTDLAADNDAAGNVVKYNLNAEVIHQIFIQYPAVY 193
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BLAST of mRNA_E_fasciculatus_S2_contig9631.17642.1 vs.
Match: BSD (domain-containing protein n=1 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RJ52_9STRA)

HSP 1 Score: 67.4 bits (163), Expect = 5.990e-9
Identity = 40/94 (42.55%), Postives = 59/94 (62.77%), Query Frame = 1 
Query:  556 DARQRAALLAGDEVLTAQYREMVDGAVVTEEEFWESRRRTLAEEDAKTASRHTGTPSEMPSDLVAETTSTGTL-KFKLNARTIHSIFTMYPIVF 834
            + +QRAALLA +  L  Q+ EMV+  +++EE+FW SRR  +A E +K   + TG  S + +DL A+  + G + K+ LNA  IH IF  YP V+
Sbjct:  123 EIKQRAALLAANPALKRQHTEMVNDGLISEEDFWASRRHLIAGEASKR--QKTGKTSAILTDLAADNDAAGNVVKYNLNAEVIHQIFIQYPAVY 214
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig9631.17642.1 vs.
Match: BSD (domain-containing protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4B6V9_HYAAE)

HSP 1 Score: 67.0 bits (162), Expect = 7.000e-9
Identity = 41/93 (44.09%), Postives = 58/93 (62.37%), Query Frame = 1 
Query:  556 DARQRAALLAGDEVLTAQYREMVDGAVVTEEEFWESRRRTLAEEDAKTASRHTGTPSEMPSDLVAETTSTGTL-KFKLNARTIHSIFTMYPIV 831
            + +QRAALLA +  L  Q+ EMV+  +++EE+FW SRR  +A E +K   + TG  S + +DL AE  + G + K+ LNA  IH IF  YP V
Sbjct:  120 EIKQRAALLAANPTLKRQHMEMVNDGLISEEDFWASRRHLIAGEASKR--QKTGKTSAILTDLAAENDAGGNVVKYNLNAEVIHQIFIQYPAV 210
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BLAST of mRNA_E_fasciculatus_S2_contig9631.17642.1 vs.
Match: General (transcription factor iih n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1APW3_PLAHL)

HSP 1 Score: 67.0 bits (162), Expect = 7.040e-9
Identity = 41/94 (43.62%), Postives = 58/94 (61.70%), Query Frame = 1 
Query:  556 DARQRAALLAGDEVLTAQYREMVDGAVVTEEEFWESRRRTLAEEDAKTASRHTGTPSEMPSDLVAETTSTGTL-KFKLNARTIHSIFTMYPIVF 834
            + +QRAALLA +  L  Q+ EMV+  +++EE+FW SRR  +A E +K   + T   S + +DL A   S G + K+ LNA  IH IFT YP V+
Sbjct:  124 EIKQRAALLAANPALKRQHTEMVNDGLISEEDFWASRRHLIAGEASKR--QKTAKTSAILTDLAANNDSGGNVVKYNLNAEVIHQIFTQYPAVY 215
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig9631.17642.1 vs.
Match: General (transcription factor IIH subunit, putative n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CGY8_PYTIN)

HSP 1 Score: 66.6 bits (161), Expect = 9.440e-9
Identity = 42/108 (38.89%), Postives = 64/108 (59.26%), Query Frame = 1 
Query:  511 RHRDSMPGGRMRDVHDARQRAALLAGDEVLTAQYREMVDGAVVTEEEFWESRRRTLAEEDAKTASRHTGTPSEMPSDLVAETTSTGTL-KFKLNARTIHSIFTMYPIV 831
            RHR +     + +  + + RAALLA +  L  Q+ EMV+  +++EE+FW +RR  +A E +K   + TG  S + +DL A++ S G + K+ LNA  IH IF  YP V
Sbjct:  113 RHRSASDRTPLCNAAEIKHRAALLASNATLKRQHTEMVNQGLISEEDFWATRRHLIANEASKR--QKTGKTSAILTDLTADSESGGNVVKYNLNAEVIHQIFIQYPAV 218
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BLAST of mRNA_E_fasciculatus_S2_contig9631.17642.1 vs.
Match: Uncharacterized (protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662X0X0_9STRA)

HSP 1 Score: 65.5 bits (158), Expect = 2.350e-8
Identity = 39/94 (41.49%), Postives = 58/94 (61.70%), Query Frame = 1 
Query:  556 DARQRAALLAGDEVLTAQYREMVDGAVVTEEEFWESRRRTLAEEDAKTASRHTGTPSEMPSDLVAETTSTGTL-KFKLNARTIHSIFTMYPIVF 834
            + +QRAALLA +  L  Q+ EMV+  +++EE+FW SRR  +A E +K   + TG  S + +DL  +  + G + K+ LNA  IH IF  YP V+
Sbjct:  150 EIKQRAALLAANPTLKRQHTEMVNDGLISEEDFWASRRHLIAAEASKR--QKTGKTSAILTDLAGDNDTGGNVVKYNLNAEVIHQIFIQYPAVY 241
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig9631.17642.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 18
Match NameE-valueIdentityDescription
TFIIH1.100e-17397.50subunit (Partial) (Fragment) n=1 Tax=Ectocarpus si... [more]
BSD6.970e-11895.22domain-containing protein n=1 Tax=Ectocarpus sp. C... [more]
BSD1.310e-1029.44domain-containing protein n=1 Tax=Tribonema minus ... [more]
General1.730e-941.94transcription factor IIH subunit (Fragment) n=1 Ta... [more]
BSD5.100e-942.55domain-containing protein n=2 Tax=Phytophthora ker... [more]
BSD5.990e-942.55domain-containing protein n=1 Tax=Phytophthora ker... [more]
BSD7.000e-944.09domain-containing protein n=1 Tax=Hyaloperonospora... [more]
General7.040e-943.62transcription factor iih n=1 Tax=Plasmopara halste... [more]
General9.440e-938.89transcription factor IIH subunit, putative n=2 Tax... [more]
Uncharacterized2.350e-841.49protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig9631contigE_fasciculatus_S2_contig9631:225..3767 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score511.1
Seed ortholog evalue3.2e-142
Seed eggNOG ortholog2880.D8LFT0
Model size840
KEGG koko:K03141
KEGG Pathwayko03022,ko03420,ko05203,map03022,map03420,map05203
KEGG ModuleM00290
Hectar predicted targeting categoryother localisation
GOsGO:0000428,GO:0000439,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005667,GO:0005675,GO:0006139,GO:0006259,GO:0006281,GO:0006351,GO:0006355,GO:0006357,GO:0006360,GO:0006366,GO:0006464,GO:0006468,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009889,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0016070,GO:0016310,GO:0016591,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0019538,GO:0030880,GO:0031323,GO:0031326,GO:0031974,GO:0031981,GO:0032774,GO:0032806,GO:0032991,GO:0033554,GO:0034641,GO:0034645,GO:0034654,GO:0036211,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043412,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044451,GO:0044464,GO:0044798,GO:0046483,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051252,GO:0051716,GO:0055029,GO:0060255,GO:0061695,GO:0065007,GO:0070013,GO:0070816,GO:0071704,GO:0080090,GO:0090304,GO:0090575,GO:0097659,GO:1901360,GO:1901362,GO:1901564,GO:1901576,GO:1902494,GO:1902554,GO:1902911,GO:1903506,GO:1990234,GO:2000112,GO:2001141
Exons5
EggNOG free text desc.phosphorylation of RNA polymerase II C-terminal domain
EggNOG OGsKOG2074@1,KOG2074@2759
Cds size840
COG Functional cat.K
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko03021,ko03400
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842609.109085-CDS-E_fasciculatus_S2_contig9631:224..4161696842609.109085-CDS-E_fasciculatus_S2_contig9631:224..416Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig9631 225..416 -
1696842609.1500132-CDS-E_fasciculatus_S2_contig9631:931..10611696842609.1500132-CDS-E_fasciculatus_S2_contig9631:931..1061Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig9631 932..1061 -
1696842609.1607716-CDS-E_fasciculatus_S2_contig9631:1594..16841696842609.1607716-CDS-E_fasciculatus_S2_contig9631:1594..1684Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig9631 1595..1684 -
1696842609.1701984-CDS-E_fasciculatus_S2_contig9631:2208..24531696842609.1701984-CDS-E_fasciculatus_S2_contig9631:2208..2453Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig9631 2209..2453 -
1696842609.1801088-CDS-E_fasciculatus_S2_contig9631:3584..37671696842609.1801088-CDS-E_fasciculatus_S2_contig9631:3584..3767Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig9631 3585..3767 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig9631.17642.1prot_E_fasciculatus_S2_contig9631.17642.1Ectocarpus fasciculatus EfasUO2polypeptideE_fasciculatus_S2_contig9631 225..3767 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E_fasciculatus_S2_contig9631.17642.1

>prot_E_fasciculatus_S2_contig9631.17642.1 ID=prot_E_fasciculatus_S2_contig9631.17642.1|Name=mRNA_E_fasciculatus_S2_contig9631.17642.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=280bp
MSVPGPSLGAGEEVVMTAHAVHKKTPGTVWFTSRRALWKAADGKAAVQRV
EVAWAAVKSFQCSPASEARAMMRLLRVTEGQPPIIFRFTETPGGTPREVL
ERAQAAVRKALKGDAGAGKSKTGVAEGGGAKGTGKGKAGKDGGSSKDALK
KMKWKTRGGLLGTASGGQSLRHRDSMPGGRMRDVHDARQRAALLAGDEVL
TAQYREMVDGAVVTEEEFWESRRRTLAEEDAKTASRHTGTPSEMPSDLVA
ETTSTGTLKFKLNARTIHSIFTMYPIVFK*
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mRNA from alignment at E_fasciculatus_S2_contig9631:225..3767-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E_fasciculatus_S2_contig9631.17642.1 ID=mRNA_E_fasciculatus_S2_contig9631.17642.1|Name=mRNA_E_fasciculatus_S2_contig9631.17642.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=3543bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig9631:225..3767- (Ectocarpus fasciculatus EfasUO2)
ATGAGCGTTCCAGGGCCTTCTCTAGGCGCTGGAGAGGAGGTGGTCATGAC
CGCCCACGCTGTACACAAGAAAACGCCGGGAACGGTATGGTTCACGAGTC
GGAGGGCCTTGTGGAAAGCCGCCGATGGCAAGGCGGCTGTGCAGCGAGTC
GAGGTTGCGTGGGCGGCAGTCAAGAGCTTTCAGGTGCGTGGTTTGGTGTG
TGTTTCCTATTGCAAAGCCTGGTTTGCCCGCGTATTGTGTTTATATATGT
GAGGTTGGAAGGTGGCGCGCGTTTTGGAACAAATCCGCGAAGAAGCTTCT
TGAATCCTTGCGTTCATGTGTGCTGAGCGACGGCGGTGTGACTACAGCAG
CAGTACTACCGCCCGTAGTGTGAACGCTAATCTTGAAGTATGCATACAGC
AGTAGTACTGCTGATACCCAACAACGTTAGGGGTGGAGAGCAAACCAAAG
ACGTGCAGAACATCGAAAATCAATAAAATAGTCACGTTGGGCGCGTGATC
CTATATGGTCAGCAGAACGACTTGAACGGATACATAGCAACCGAGCGTGA
CCGGCTTGCCGGCCACGCTCGGCTTCTTCCGTTCCAACCCCTCTCACCCA
CCATGCACGGCCTAGTCAAGCTAGGAGTCCGTGCTTGTTGTGGGGTACGC
CAGGCTTGGGAGTGCGAACATCGCCTCCCCACTCATTAGCCCCCGGCTTG
CGCTCCACACCAATTGTTTGCTCTGAGAGTACCTACTTCCGTCCCCATGT
CCGTCCAGAAGAAATGCTAATGCTACCGCTGTACTCCCTTACAGTACCCC
TAGGTGTAGCACTCCCTCAATGAACATGAACGAGATCGAGAGCGCCGTGA
AGCGTTAACGTTGCGTTGCCCGCCTGCGTGCAAAGGGGTTGCTGGTCGTG
CAGAACGACGGGACGAGAGCGAGAGCGCCAGCAAGAGCAGCCTTAACGTT
TGCACCCTGCAAACACATGAGCACCCCCCATGGTAGCCTGGCCTAAAACC
ACCTAGTCTGGACGAGAGCTGCAGCGAGAAATACCGTAGTTAGCGCGGCT
GTGTCAGGCACGCTACGCTCCCGCCCTGAAAGCATGCCTCCCCGGCTCTC
CGGCACTTAAACCAGTCATGATGGCTCACCAGAAAACTGTGCATCAGTCA
ACCGCGTTTATGACTCTCTCTCTCTCTCTCTCTCTCTCTCTCGTCCTGTC
TCTCCCTCGCTGTCGTCTGTCTGTCTGTCCATCTCTTTGTCCGTGTGCCT
ATGTCGGTCTCTCTGTCTGTGTGCTTGTCTCTCTCTCTCTCTCCTCTCTC
TCTCCTTCCTCAAGTGCTCCCCGGCAAGCGAGGCCAGAGCCATGATGCGC
CTCCTTCGAGTCACCGAGGGCCAACCCCCCATCATTTTCCGGTTCACGGA
AACACCCGGTGGTACCCCCAGGGAGGTCCTAGAGAGGGCGCAGGCGGCAG
TCCGAAAGGCGCTCAAAGGGGACGCGGGGGCAGGAAAAAGCAAGACAGGG
GTTGCTGAAGGCGGTGGCGCCAAGGGGACCGGGAAGGGAAAGGCTGGCAA
GGATGGCGGGTGGGTTTCCAAGCCGAGGTTGACCCGGGGGGGGGTAGGCG
TTTAAGACGATGGTGTTGTCTTGCCGTAGGGTCGAGAGGTGGATGGGGGG
GGGGGGGGTTCGAGTACCAGCGGCTTTCGCCCTGCCTTGCTCCTGCATAG
TGGTGTTCTGTGAAGATCATGCAACCACTCTTGCTGGCTGTGGCTGCTGT
ACCGGCCGACTGACGCACTGTAGCGCAACTGTTGTCGGCATAAGGTTCTA
CTCCACCACTACTTGCGGACTACTTGCGGTGTGTTGTGGTATCCCCCGTC
CGATCTGTTGGTGTTCCGTACCGTCGGCCGAAAACCGTTGCGGTTCTGGC
TTCGCTCCCATCCGACCCGCAGCACCATTCGCATATGGACCATATTCCGT
GCTCTGTGCCTATCGGTCCAAGCACCAAAAGCGGTGACTTTTTTTCTTTT
TTCGTTCCTGGAACGGGATGGTGATCCGTCTCACCTGCTCGTTCGTGCTT
CGCTTGGTGTTGTTGGCCTCCCAGCAGCAGCAGCAGCTCCAAGGACGCGC
TGAAAAAGATGAAGTGGAAGACAAGGGGTGGGCTGCTGGGCACGGCCTCG
GGTGGGCAGTCCCTTCGCCATAGGTGAGCGGCGACAGCTTTGGTACATCC
TTATCCTTAGTCGCGGCGGTCGTTAAAAGATAACTCTGTGCATGGTTGAT
GCAACACGTTGACGCGCGTAGTGAGAGTACTCGTGGGGGGGGGGCATGTT
GTGTAGTTGTTCTCCGCTGAGTGGAGGCGCGGCTCCACGCCTGGTTCTCC
GAATGTTGTTGGGCATTGGCGGAAGCAAGATGGTATCGCCGGAAACGGCC
ACTTTGGTCCAGATAGAATAGGATCCACCCGTTGTCGAAAAAACAGGTGC
GGAAAAACCAACCCAAGCATTTAGAGGTATACGAGGACGGTTGAGTTTCG
CACAATCAAGCGGGCCATTTGTTTCTCGGCTCCCATTGCCCGGTGGTTGA
TGCAGAAGAAGGTGATGGCTGAATCCATCCATTTCACCTACTGCTACTGC
TTCTGCCGCTGCTTCCGCCGCTGCTGCTGCTGCTGCTGCTGCCGTTTGCT
TGATGTTAATGTTCCTTTGCGGAAACGGCGGCGTGTGCCCGGCAACGGCG
ACACAGGGACAGCATGCCCGGCGGTCGAATGCGCGATGTACACGACGCCC
GTCAACGCGCGGCCCTGCTTGCGGGGGACGAGGTCCTCACGGCACAGTAC
CGGGAGATGGTCGACGGAGCCGTTGTCACGGAAGAGGTAATTGTGCTCGA
CTAGAGTGCTCGAAAATGTTCGACGAAAAGTTTCACCAATCGCTGTTGTC
AATGTATGTCGATAGTGCTCTTTGACAAAATAATCAGCAATCAGTGCTTT
GTATTTCTTACATGCGCAGACTACCCACCCGTTTTTTTTTTTGGCTTTGG
CGTTTCAACCGCAGTTGAGCCGCACGGGCTTCCAAGAGGTGGGCGAGTCT
AGCTCGAGGCTAGACTAGATAAGAGAAGATCGGAGCCAGTCTGGGCATGG
CGACGGCGTACAAGCCATACCCTACTGCAGAGGTTATCTTGTGCTACACG
TACGGTTAGCGGTCGCACTTCCTTTAGTTTTGGCCGACTTCGACGCGTGC
TGTTGCTCTCTCCCTTTATTTACCTCCACTTTCCTCTGATTGCTGGTCCT
TCGACGAATTTTGGCCGTGTGTGATGCGCCGTGCGTGCATTGCCGCCCCA
CCCTCGCTTCGCGGCTTTTTTGCGGGGGGTGCGGGGTTTGGGGATCGACA
GGAGTTCTGGGAGTCGCGGAGGCGTACTCTAGCGGAAGAAGACGCCAAGA
CCGCGTCGAGACACACGGGGACACCGAGCGAGATGCCGAGCGACCTGGTG
GCCGAGACCACCTCCACGGGGACCCTGAAGTTCAAGCTCAACGCGCGTAC
CATACACAGCATCTTTACGATGTACCCCATCGTCTTCAAGTGA
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Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig9631:225..3767-

>mRNA_E_fasciculatus_S2_contig9631.17642.1 ID=mRNA_E_fasciculatus_S2_contig9631.17642.1|Name=mRNA_E_fasciculatus_S2_contig9631.17642.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=840bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig9631:225..3767- (Ectocarpus fasciculatus EfasUO2)
ATGAGCGTTCCAGGGCCTTCTCTAGGCGCTGGAGAGGAGGTGGTCATGAC
CGCCCACGCTGTACACAAGAAAACGCCGGGAACGGTATGGTTCACGAGTC
GGAGGGCCTTGTGGAAAGCCGCCGATGGCAAGGCGGCTGTGCAGCGAGTC
GAGGTTGCGTGGGCGGCAGTCAAGAGCTTTCAGTGCTCCCCGGCAAGCGA
GGCCAGAGCCATGATGCGCCTCCTTCGAGTCACCGAGGGCCAACCCCCCA
TCATTTTCCGGTTCACGGAAACACCCGGTGGTACCCCCAGGGAGGTCCTA
GAGAGGGCGCAGGCGGCAGTCCGAAAGGCGCTCAAAGGGGACGCGGGGGC
AGGAAAAAGCAAGACAGGGGTTGCTGAAGGCGGTGGCGCCAAGGGGACCG
GGAAGGGAAAGGCTGGCAAGGATGGCGGCAGCTCCAAGGACGCGCTGAAA
AAGATGAAGTGGAAGACAAGGGGTGGGCTGCTGGGCACGGCCTCGGGTGG
GCAGTCCCTTCGCCATAGGGACAGCATGCCCGGCGGTCGAATGCGCGATG
TACACGACGCCCGTCAACGCGCGGCCCTGCTTGCGGGGGACGAGGTCCTC
ACGGCACAGTACCGGGAGATGGTCGACGGAGCCGTTGTCACGGAAGAGGA
GTTCTGGGAGTCGCGGAGGCGTACTCTAGCGGAAGAAGACGCCAAGACCG
CGTCGAGACACACGGGGACACCGAGCGAGATGCCGAGCGACCTGGTGGCC
GAGACCACCTCCACGGGGACCCTGAAGTTCAAGCTCAACGCGCGTACCAT
ACACAGCATCTTTACGATGTACCCCATCGTCTTCAAGTGA
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