Homology
BLAST of mRNA_E_fasciculatus_S2_contig9846.17851.1 vs.
Match: Arf-GAP (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3P5_9PHAE)
HSP 1 Score: 438 bits (1126), Expect = 4.290e-142
Identity = 339/489 (69.33%), Postives = 343/489 (70.14%), Query Frame = 1
Query: 1 MSEQALRKRLEALVKTGENRFCADCGKREPRWASVNLGLFICLDCSGIHRNLGVHISFVRSVNLDTWKPAQVKGMEEMGNERAKAHFEAEVPASYTVPREHATVREREKWIRDKYEHRRFVSRDPQPARQRKPEESTGSRSSRKDSGATSXXXXXXXXXXXXXXXXXXXXXXXTSTAPSPAXXXXASSTTTRVVPRLQKAGTGAVKAASXXXXXXXXXXXXXXXPAVDLLDFSEPAPPQAPPRASPPPLRASSAPPTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSILSMFNSPAAGGGVAGRGMAGAVGSSPVAGVMKTPELNQVSQMMSTLNVGGVAPMGSQQMGMPGAGGWAQQQKHQPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKNQGGLNAGATGGAMFGVGQAGGHQQQPQGMGVATNGSGFAGLRGG 1467
M+EQALRKRLEALVKTGENRFCADCGKREPRWASVNLGLFICLDCSGIHRNLGVHISFVRSVNLDTWKPAQV+GMEEMGNERAKAHFEAEVPASYTVPREHATVREREKWIRDKYEHRRFVSR PQPARQRKPEESTGSRSSR DSGA S XXXXXXXXXXXXXXXXXX AP XXXX TTTR VPRLQKAGTGAVKAAS PAVDLLDFSEP PPQAP XXX XX XXXXXXXX SILSMFNSPA GGG GR MAG VGSSPV GVMKTPELNQVSQMMSTLNVGG+APMGSQQMGMPGAGGW QQQ XXXXXXXXXX XXXXXXXXXXXXXX K GG AGA+GGA GVGQAGG QQ PQGM A NGSG GLRGG
Sbjct: 1 MTEQALRKRLEALVKTGENRFCADCGKREPRWASVNLGLFICLDCSGIHRNLGVHISFVRSVNLDTWKPAQVQGMEEMGNERAKAHFEAEVPASYTVPREHATVREREKWIRDKYEHRRFVSRSPQPARQRKPEESTGSRSSRMDSGAASSKSPTXXXXXXXXXXXXXXXXXXXXXAPXXXXXXXXXXTTTRAVPRLQKAGTGAVKAASAAAAAPSAVPA----PAVDLLDFSEPVPPQAPXXXXXXXXXXXXXX-XXXXMDQMFEFSDFQSAPSSSPGATVPAAAALVGSQQQQQPATVQQPXXQSXXXXXXXXAAGAPGKASAASILSMFNSPA-GGGAVGRSMAGPVGSSPVTGVMKTPELNQVSQMMSTLNVGGLAPMGSQQMGMPGAGGWTQQQXXX-XXXXXXXXXXWAQQQKLQQLLQQXXXXXXXXXXXXXXLQQKIHGG--AGASGGAKSGVGQAGGDQQHPQGMDAAPNGSGLTGLRGG 480
BLAST of mRNA_E_fasciculatus_S2_contig9846.17851.1 vs.
Match: Arf-GAP (domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBT0_ECTSI)
HSP 1 Score: 405 bits (1040), Expect = 5.320e-131
Identity = 304/390 (77.95%), Postives = 306/390 (78.46%), Query Frame = 1
Query: 1 MSEQALRKRLEALVKTGENRFCADCGKREPRWASVNLGLFICLDCSGIHRNLGVHISFVRSVNLDTWKPAQVKGMEEMGNERAKAHFEAEVPASYTVPREHATVREREKWIRDKYEHRRFVSRDPQPARQRKPEESTGSRSSRKDSGATSXXXXXXXXXXXXXXXXXXXXXXXTSTAPSPAXXXXASSTTTRVVPRLQKAGTGAVKAASXXXXXXXXXXXXXXXPAVDLLDFSEPAPPQAPPRASPPPLRASSAPPTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSILSMFNSPAAGGGVAGRGMAGAVGSSPVAGVMKTPELNQVSQMMSTLNVGGVAPMGSQQMGMP 1170
MSEQALRKRLEALVKTGENRFCADCGKREPRWASVNLGLFICLDCSGIHRNLGVHISFVRSVNLDTWKPAQVKGMEEMGNERAKAHFEAEVPASYTVPREHATVREREKWIRDKYEHRRFVSR+PQPARQRKPEESTGSRSSRKDSGA XXXXXXXXXXXXXXXXXXXXXXX AP XXXX TTR VPRLQKAGTGAVKAAS XXXXXXXXXXXXX PAVDLLDFSEPAPPQAP XXXX XXXXX XXXXXXXXXX SILSMFNSPA GGGVAGR MAG VGSSPVAGVMKTPELNQVSQMMSTLNVGG+APMGSQQMGMP
Sbjct: 1 MSEQALRKRLEALVKTGENRFCADCGKREPRWASVNLGLFICLDCSGIHRNLGVHISFVRSVNLDTWKPAQVKGMEEMGNERAKAHFEAEVPASYTVPREHATVREREKWIRDKYEHRRFVSRNPQPARQRKPEESTGSRSSRKDSGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPXXXXXXXXXXXTTRAVPRLQKAGTGAVKAASTXXXXXXXXXXXXXAPAVDLLDFSEPAPPQAPXXXXXXXXXXXXX--XXXXXADQMFEFSDFQSAPSSSSGATVPXXXXXVGSQQQPAAVQQPASQSGXXXXXXXXXXGAPGKASAASILSMFNSPA-GGGVAGRSMAGPVGSSPVAGVMKTPELNQVSQMMSTLNVGGLAPMGSQQMGMP 387
BLAST of mRNA_E_fasciculatus_S2_contig9846.17851.1 vs.
Match: Arf-GAP (domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8F7_9STRA)
HSP 1 Score: 182 bits (461), Expect = 3.020e-50
Identity = 87/119 (73.11%), Postives = 99/119 (83.19%), Query Frame = 1
Query: 19 RKRLEALVKTGENRFCADCGKREPRWASVNLGLFICLDCSGIHRNLGVHISFVRSVNLDTWKPAQVKGMEEMGNERAKAHFEAEVPASYTVPREHATVREREKWIRDKYEHRRFVSRDP 375
+KRLEALVK +NRFCADCG REPRWASVNLGLFICL CSGIHRNLGVHISFVRSVNLDTWK QV ME +GN RAKA++EA VP VP E ++VRE +KWIR KYEH+R+++R P
Sbjct: 7 KKRLEALVKREDNRFCADCGCREPRWASVNLGLFICLGCSGIHRNLGVHISFVRSVNLDTWKTEQVDKMERIGNARAKAYYEANVPPGTPVPTESSSVRELDKWIRSKYEHKRYIARGP 125
BLAST of mRNA_E_fasciculatus_S2_contig9846.17851.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UXM8_HETAK)
HSP 1 Score: 180 bits (456), Expect = 3.710e-49
Identity = 83/128 (64.84%), Postives = 103/128 (80.47%), Query Frame = 1
Query: 4 SEQALRKRLEALVKTGENRFCADCGKREPRWASVNLGLFICLDCSGIHRNLGVHISFVRSVNLDTWKPAQVKGMEEMGNERAKAHFEAEVPASYTVPREHATVREREKWIRDKYEHRRFVSRDPQPAR 387
SE+ ++RL AL K EN+FC DCG REPRWAS LG+F+C+ CSGIHRNLGVHISFVRSVNLD+W+ V+ ME GN RA+A+FEAEVP++Y +P E +T RE EKWIRDKYEHRRF++R+P P +
Sbjct: 15 SEEDHKRRLTALTKKDENKFCIDCGAREPRWASATLGVFMCIRCSGIHRNLGVHISFVRSVNLDSWREDHVQRMERWGNGRARAYFEAEVPSNYPIPGERSTTREVEKWIRDKYEHRRFLAREPPPGK 142
BLAST of mRNA_E_fasciculatus_S2_contig9846.17851.1 vs.
Match: Hypothetical (protein (Fragment) n=2 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UT74_9STRA)
HSP 1 Score: 175 bits (443), Expect = 3.870e-44
Identity = 81/124 (65.32%), Postives = 100/124 (80.65%), Query Frame = 1
Query: 4 SEQALRKRLEALVKTGENRFCADCGKREPRWASVNLGLFICLDCSGIHRNLGVHISFVRSVNLDTWKPAQVKGMEEMGNERAKAHFEAEVPASYTVPREHATVREREKWIRDKYEHRRFVSRDP 375
S Q + RLEA+VK+G+N+FCADCG REPRWAS LG+FIC+ CSGIHRNLGVHISFVRSVNLDTWK V+ ME GN RA +FEA+VP +Y +P E ++ RE E+WIRDKYE+R+F +R+P
Sbjct: 15 SHQDHKVRLEAMVKSGDNKFCADCGAREPRWASATLGVFICIRCSGIHRNLGVHISFVRSVNLDTWKEDHVRKMEAWGNARAAEYFEADVPPNYRIPDEKSSTRELERWIRDKYEYRKFAARNP 138
BLAST of mRNA_E_fasciculatus_S2_contig9846.17851.1 vs.
Match: Arf-GAP (domain-containing protein (Fragment) n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G5A4X3_PHYSP)
HSP 1 Score: 166 bits (420), Expect = 4.000e-44
Identity = 75/120 (62.50%), Postives = 96/120 (80.00%), Query Frame = 1
Query: 16 LRKRLEALVKTGENRFCADCGKREPRWASVNLGLFICLDCSGIHRNLGVHISFVRSVNLDTWKPAQVKGMEEMGNERAKAHFEAEVPASYTVPREHATVREREKWIRDKYEHRRFVSRDP 375
L+K+L L+K EN+FCADCG R PRWAS+NLG+FIC+ CSGIHR+LGVH++FVRSVNLD+W QV+ M+ GN RAKA++EA VP Y +P EH++VRE+E WIR+KYE +RFV P
Sbjct: 16 LKKQLNELMKLEENKFCADCGCRGPRWASINLGVFICIACSGIHRSLGVHLTFVRSVNLDSWTSEQVQQMQRWGNARAKAYYEANVPRDYRIPTEHSSVREKEMWIREKYERKRFVGEAP 135
BLAST of mRNA_E_fasciculatus_S2_contig9846.17851.1 vs.
Match: Arf-GAP (domain-containing protein n=1 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RQV0_9STRA)
HSP 1 Score: 172 bits (435), Expect = 1.070e-43
Identity = 77/120 (64.17%), Postives = 99/120 (82.50%), Query Frame = 1
Query: 16 LRKRLEALVKTGENRFCADCGKREPRWASVNLGLFICLDCSGIHRNLGVHISFVRSVNLDTWKPAQVKGMEEMGNERAKAHFEAEVPASYTVPREHATVREREKWIRDKYEHRRFVSRDP 375
L+K+L L+K EN+FCADCG R PRWAS+NLG+FIC+ CSGIHR+LGVH++FVRSVNLD+W P QV+ M+ GN RAKA++EA VP Y +P EHA+VRE+E WIR+KYE +RFV ++P
Sbjct: 15 LKKKLNELMKLEENKFCADCGCRGPRWASINLGVFICIACSGIHRSLGVHLTFVRSVNLDSWTPEQVQQMQRWGNGRAKAYYEATVPRDYRIPTEHASVREKEMWIREKYERKRFVGQEP 134
BLAST of mRNA_E_fasciculatus_S2_contig9846.17851.1 vs.
Match: Arf-GAP (domain-containing protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4C531_HYAAE)
HSP 1 Score: 169 bits (427), Expect = 2.310e-42
Identity = 76/116 (65.52%), Postives = 96/116 (82.76%), Query Frame = 1
Query: 16 LRKRLEALVKTGENRFCADCGKREPRWASVNLGLFICLDCSGIHRNLGVHISFVRSVNLDTWKPAQVKGMEEMGNERAKAHFEAEVPASYTVPREHATVREREKWIRDKYEHRRFV 363
L+K+L L+K EN+FCADCG R PRWAS+NLG+FIC+ CSGIHR+LGVH++FVRSVNLD+W QV+ M+ GN RAKAHFEA +P+ Y VP EH++VR++E WIRDKYE +RFV
Sbjct: 17 LKKQLNELMKREENKFCADCGSRGPRWASINLGVFICIACSGIHRSLGVHVTFVRSVNLDSWTTEQVQQMQRWGNARAKAHFEAALPSDYFVPSEHSSVRDKELWIRDKYERKRFV 132
BLAST of mRNA_E_fasciculatus_S2_contig9846.17851.1 vs.
Match: Arf-GAP (domain-containing protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WQC6_9STRA)
HSP 1 Score: 167 bits (423), Expect = 5.400e-42
Identity = 76/125 (60.80%), Postives = 98/125 (78.40%), Query Frame = 1
Query: 16 LRKRLEALVKTGENRFCADCGKREPRWASVNLGLFICLDCSGIHRNLGVHISFVRSVNLDTWKPAQVKGMEEMGNERAKAHFEAEVPASYTVPREHATVREREKWIRDKYEHRRFVSRDPQPARQ 390
L+K+L L+K EN+FCADCG R PRWAS+NLG+FIC+ CSGIHR+LGVH++FVRSVNLD+W P QV M+ GN +AK ++EA VP Y VP EH++VRE+E WIR+KYE +RFV P+ R+
Sbjct: 13 LKKQLNELMKLEENKFCADCGCRGPRWASINLGVFICIACSGIHRSLGVHLTFVRSVNLDSWTPEQVAQMQRWGNAKAKGYYEANVPRDYRVPTEHSSVREKEMWIREKYERKRFVGEAPREERE 137
BLAST of mRNA_E_fasciculatus_S2_contig9846.17851.1 vs.
Match: Arf-GAP (domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3G6B5_PHYRM)
HSP 1 Score: 158 bits (400), Expect = 5.470e-42
Identity = 70/111 (63.06%), Postives = 89/111 (80.18%), Query Frame = 1
Query: 28 LEALVKTGENRFCADCGKREPRWASVNLGLFICLDCSGIHRNLGVHISFVRSVNLDTWKPAQVKGMEEMGNERAKAHFEAEVPASYTVPREHATVREREKWIRDKYEHRRF 360
L L+K EN+FCADCG R PRWAS+NLG+FIC+ CSGIHR+LGVH++FVRSVNLD+W P QV+ M+ GN RAK ++EA VP + +P EH+ VR++E WIRDKYE +RF
Sbjct: 1 LNDLMKLEENKFCADCGCRGPRWASINLGVFICIACSGIHRSLGVHLTFVRSVNLDSWTPEQVQQMQRWGNGRAKGYYEANVPRDFRIPTEHSAVRDKEMWIRDKYERKRF 111
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig9846.17851.1 vs.
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90 )
Total hits: 25
0 1 Expect = 4.29e-142 / Id = 69.33 Expect = 5.32e-131 / Id = 77.95 Expect = 3.02e-50 / Id = 73.11 Expect = 3.71e-49 / Id = 64.84 Expect = 3.87e-44 / Id = 65.32 Expect = 4.00e-44 / Id = 62.50 Expect = 1.07e-43 / Id = 64.17 Expect = 2.31e-42 / Id = 65.52 Expect = 5.40e-42 / Id = 60.80 Expect = 5.47e-42 / Id = 63.06 Sequence Arf-GAP Arf-GAP Arf-GAP Hypothetical Hypothetical Arf-GAP Arf-GAP Arf-GAP Arf-GAP Arf-GAP
Match Name E-value Identity Description
Arf-GAP 4.290e-142 69.33 domain-containing protein n=1 Tax=Ectocarpus sp. C... [more] Arf-GAP 5.320e-131 77.95 domain-containing protein n=1 Tax=Ectocarpus silic... [more] Arf-GAP 3.020e-50 73.11 domain-containing protein (Fragment) n=1 Tax=Tribo... [more] Hypothetical 3.710e-49 64.84 protein (Fragment) n=1 Tax=Heterosigma akashiwo Ta... [more] Hypothetical 3.870e-44 65.32 protein (Fragment) n=2 Tax=Fibrocapsa japonica Tax... [more] Arf-GAP 4.000e-44 62.50 domain-containing protein (Fragment) n=1 Tax=Phyto... [more] Arf-GAP 1.070e-43 64.17 domain-containing protein n=1 Tax=Phytophthora ker... [more] Arf-GAP 2.310e-42 65.52 domain-containing protein n=1 Tax=Hyaloperonospora... [more] Arf-GAP 5.400e-42 60.80 domain-containing protein n=1 Tax=Phytophthora meg... [more] Arf-GAP 5.470e-42 63.06 domain-containing protein n=1 Tax=Phytophthora ram... [more]
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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name Value
Taxonomic scope Eukaryota Stop 1 Start 1 Seed ortholog score 409.8 Seed ortholog evalue 1.9e-111 Seed eggNOG ortholog 2880.D8LBT0 Preferred name AGD15 Model size 2436 KEGG ko ko:K12486 KEGG Pathway ko04144,map04144 Hectar predicted targeting category other localisation GOs GO:0000003,GO:0001558,GO:0003006,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005768,GO:0005794,GO:0005802,GO:0005829,GO:0006810,GO:0007275,GO:0008150,GO:0009791,GO:0009838,GO:0009908,GO:0009987,GO:0010227,GO:0012505,GO:0016043,GO:0016192,GO:0022414,GO:0022607,GO:0030135,GO:0030136,GO:0030276,GO:0030308,GO:0031410,GO:0031982,GO:0031984,GO:0032501,GO:0032502,GO:0034622,GO:0035459,GO:0035652,GO:0040008,GO:0043085,GO:0043087,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043547,GO:0043933,GO:0044085,GO:0044093,GO:0044422,GO:0044424,GO:0044431,GO:0044444,GO:0044446,GO:0044464,GO:0045926,GO:0048367,GO:0048437,GO:0048519,GO:0048523,GO:0048608,GO:0048731,GO:0048856,GO:0050789,GO:0050790,GO:0050794,GO:0051128,GO:0051179,GO:0051234,GO:0051336,GO:0051345,GO:0060858,GO:0061458,GO:0065003,GO:0065007,GO:0065009,GO:0071840,GO:0090567,GO:0090630,GO:0097708,GO:0098791,GO:0099402 Exons 6 EggNOG free text desc. GTPase activator activity EggNOG OGs COG5347@1,KOG0703@2759 Ec32 ortholog description Arf GTPase activating protein Ec32 ortholog Ec-27_002820.1 Cds size 1563 COG Functional cat. U Best tax level Eukaryota Best eggNOG OG NA|NA|NA BRITE ko00000,ko00001,ko04131
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1696842628.0395079-CDS-E_fasciculatus_S2_contig9846:800..885 1696842628.0395079-CDS-E_fasciculatus_S2_contig9846:800..885 Ectocarpus fasciculatus EfasUO2 CDS E_fasciculatus_S2_contig9846 801..885 + 1696842628.0580454-CDS-E_fasciculatus_S2_contig9846:1371..1505 1696842628.0580454-CDS-E_fasciculatus_S2_contig9846:1371..1505 Ectocarpus fasciculatus EfasUO2 CDS E_fasciculatus_S2_contig9846 1372..1505 + 1696842628.0693474-CDS-E_fasciculatus_S2_contig9846:1985..2194 1696842628.0693474-CDS-E_fasciculatus_S2_contig9846:1985..2194 Ectocarpus fasciculatus EfasUO2 CDS E_fasciculatus_S2_contig9846 1986..2194 + 1696842628.0803127-CDS-E_fasciculatus_S2_contig9846:2520..3058 1696842628.0803127-CDS-E_fasciculatus_S2_contig9846:2520..3058 Ectocarpus fasciculatus EfasUO2 CDS E_fasciculatus_S2_contig9846 2521..3058 + 1696842628.09059-CDS-E_fasciculatus_S2_contig9846:3280..3484 1696842628.09059-CDS-E_fasciculatus_S2_contig9846:3280..3484 Ectocarpus fasciculatus EfasUO2 CDS E_fasciculatus_S2_contig9846 3281..3484 + 1696842628.1048021-CDS-E_fasciculatus_S2_contig9846:3685..4078 1696842628.1048021-CDS-E_fasciculatus_S2_contig9846:3685..4078 Ectocarpus fasciculatus EfasUO2 CDS E_fasciculatus_S2_contig9846 3686..4078 +
The following UTR feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1696842628.12039-UTR-E_fasciculatus_S2_contig9846:4078..4951 1696842628.12039-UTR-E_fasciculatus_S2_contig9846:4078..4951 Ectocarpus fasciculatus EfasUO2 UTR E_fasciculatus_S2_contig9846 4079..4951 +
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig9846.17851.1
>prot_E_fasciculatus_S2_contig9846.17851.1 ID=prot_E_fasciculatus_S2_contig9846.17851.1|Name=mRNA_E_fasciculatus_S2_contig9846.17851.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=521bp
MSEQALRKRLEALVKTGENRFCADCGKREPRWASVNLGLFICLDCSGIHR back to top mRNA from alignment at E_fasciculatus_S2_contig9846:801..4951+
Legend: polypeptide CDS UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E_fasciculatus_S2_contig9846.17851.1 ID=mRNA_E_fasciculatus_S2_contig9846.17851.1|Name=mRNA_E_fasciculatus_S2_contig9846.17851.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=4151bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig9846:801..4951+ (Ectocarpus fasciculatus EfasUO2)ATGTCGGAACAGGCGCTCAGGAAGCGATTGGAGGCCTTGGTCAAGACGGG
AGAGAACCGCTTCTGCGCCGACTGCGGCAAGAGAG GTACGTGCGGCCTAA
CCTACACTTTGTCGTGATCGGTCTGCCTGGCATGGGTACGGCACAGAACC
AGTAGCAACACGGAGTACTCGATTGTCCTCCTCGGCTCCCAAAGGAATTT
CGTTGCTCTCTGTCTCCCTCTTTCTCTCCCGCAGCTGCTCTTAACTGCTG
TCCGGTTGGTTTGACGGGCATTCTGCCGCAAAAATATGATACGTCGTCTG
GCAGCTCATCCCCCCGATGAGATGAGGTGCACGTTTCAATGAAGCTCTTG
GTATCAGTAGGCCCCCAACCAAAGCATAAACGGGGGCATCGTCTAGACCA
CGGCACGCATCCCTCTCGCTGCTGTCGACATGCAACTCGCTCGCTGGGAA
CACGCCGTTGTATGCGTCCATCAATGCAATCAAACATGCATATGATAATT
GTTGAAGAAATTGTTTTGCTCTTTCCAAAACGTAATTGCTCTTGCCAAAA
CGTCGGGCTGCTGAACACCAGAGCCTCGCTGGGCCTCCGTCAATCTCGGG
CTGTTCATATGCCTGGATTGTTCTGGAATCCACCGCAACTTGGGGGTTCA
CATCTCGTTTGTTCGGAGCGTCAACCTGGACACTTGGAAGCCGGCTCAGG
TTAAG GTACGTGTGGACAGGTTAAGGTCGCGTGGACGGCAGGGACTGCTC
TCTTGGCTTGGGGCAGCAAGTGTGACTGGTAATGCTCTGCTGTTTTTGAA
GCCTACTTGTACTCCTAATTTCAGCAGTGCTGCGCTTCCGGCGGGCTTTT
TTTTTTCATGAACATGTTGCGTTGGCGAGGACTTCAAGACTTCACACAGC
CCCTTCGACTGCTTTGATTATATCTCGAAAGGGTAGTCTTTCTGTGTTTG
TATTTAGTTTTCCTAATACTCATGTACGGGGCCGGTACAAAGGCTTGCCA
TACAGCGGCTTGAAAAATTGCGAAAAACACGTTTCTGAAATTTTTGCGAA
AAAACGTTTCCCGCCGCACTTTTCTCACAATGATGTTGTACAATATGCAA
CCTGGATGTGTACTACGCATATTACTGCGGTACATTCGCGCGTGGTGGTT
GTGTACCCACGGATCCTTTCGTGTTTTTTTTCCAGGGCATGGAAGAGATG
GGAAACGAGCGCGCCAAGGCTCATTTCGAGGCCGAAGTGCCGGCCAGCTA
CACCGTGCCGCGAGAACACGCCACTGTCCGCGAGCGCGAGAAATGGATCC
GTGACAAGTACGAGCACAGGCGTTTCGTGTCGAGGGATCCCCAGCCTGCT
CGGCAGCGGAAACCGGAGGAGTCTACCGGCTCACGATCTTCGAG GTGCGA
GAGAAAGGAGGGAGAGCAAGTGGGGAGAGGGACGAAGTCGTGGACAGAGA
AAAGCAAGCAGGTCCTGCTGCTGGTTGGGTTTTCGCTCAGCCCTCTCGCT
TGTCACGAACACAGTCATCAGATGCGATTTCCTCGCCAAGGCCCGGCTGT
CTTGACCGCTTGAAACAGTTGACCACCTGAAACAGTGCGCGAGAACGAGC
GCCGAGCACCGACCCGCCGCAACCCCCGAGCACCTTCTCCTCCTTGAGGC
TTCTATAACAACACCTTGGTCTCACCACGCCTTACGTTGCATTGCCGACA
AAATAATTGACAAATATCAGGAAGGACAGCGGCGCAACCTCCTCCAAGTC
ACCCACGAGAAAGACCGGCAGCAGTAGCAGTAGCCGGGGGGCGGGGCGAA
CATCGTCCTCGACCTCCACGGCGCCGTCACCGGCCGCTTCCAAGTCTGCG
TCATCTACCACCACCAGGGTCGTGCCCCGCCTCCAGAAGGCCGGCACCGG
GGCAGTGAAGGCCGCTTCCGCCGCCGCTGCCGCCGCCGCCACCGCTCCGG
CCGCTGTCCCCGCCCCCGCGGTCGATCTCCTCGACTTCTCGGAGCCGGCC
CCGCCCCAGGCGCCGCCAAGAGCGTCGCCGCCGCCATTGAGGGCTTCGTC
GGCGCCGCCAACGCCACCGGCGGACCCGATGTTCGAATTCTCGGATTTCC
AGTCTGCGCCTTCTTCGTCGTCGGGGGCGACGGTACCGTCGGCTGCGGCG
TCGGTGGGATCCCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCCAGC
GGCGCAGTTTGGGCAGCAAGGGCAGCAGGAGCAACCGGCGGCAGGTGCCC
CTGGGAAG GTACGTGCGTTTTCGCTCCGCTTTGTAAGCGTCAGCAAGAAT
CGTTCGATCGAACCCAAAGAGTTGGGGGTGCTTGCTGTGGCCACTGCTGC
TGCTGCTGCTGCGGGGATGGGTTGCGTGACGTCCTCTGCACGATGCTTGT
GTTGTTTCTGGTTTCATCCATGTCCTCCTCCCCCCGACCTTGCCTGCCGT
CGCCGCTCCCGTCGATTTTTGTCCTCGCAGGCATCCGCCGCGTCGATTTT
GTCCATGTTTAACAGTCCCGCGGCCGGCGGCGGCGTCGCGGGCCGCGGTA
TGGCGGGGGCTGTTGGTTCATCCCCTGTAGCGGGGGTGATGAAAACCCCA
GAGCTGAACCAAGTGTCGCAGATGATGTCGACGCTGAACGTCGGGGGCGT
CGCGCCGATGGGCTCCCAGCAGATGGGCATGCCG GTGCGTCCTTGCGTGT
GGGTTGCTTTTTGTCGCGCGAGCGCATTTTTTTGCGCCTTTTGGCCGTCC
CAAATACATCGTTGCGCGTTTGGTGCACTTCGTCGCTCCGCAGAATCATC
GATGTGCTTTTTCGTGTCACGCGTTGAGAACCCTCACGTGTGCCTCATGC
GTCTGCCTGGCTGCACGCTTTCTTCGCATGCCCAGGGTGCCGGCGGTTGG
GCGCAGCAGCAAAAACACCAGCCCCAGCAGGCGCAGGCCCAGGCGATGGC
GTGGGCCCAGCAACAGAAGCTCCAGCAGCTGCAGCAACAGCAGCAGCTGC
TCCAGCGACAGCAATGGCAAATGCAGCAGCAGCAGCAGCAGCAAAAAAAC
CAGGGGGGGTTGAACGCGGGCGCAACTGGGGGAGCTATGTTTGGCGTAGG
CCAAGCCGGCGGACACCAGCAACAACCTCAGGGCATGGGCGTGGCCACGA
ACGGTTCGGGGTTTGCTGGGCTGCGCGGGGGGGGCGAAGGGGCTGCTCAA
GGCAACGGCGCGACGGTAGTGATGCCCGGCGGCTTCGGAGCGGGGGCGGG
CGGCATGGGAATGGGGGGGCTGCGGTAA CGAAGCCCAATTGCTACCCGTG
GGTGTTGGGGCTAGTGCGGAGGTTTGCGGGCGTTGTGGCTTTGGAGGCCC
GCGAGTTAGAGCGATGTGGAAACCGGCCAGAACCATTCTTGTATGGTGTT
TGTGTAGCCTTGTCCCTTGCGTTGCTTGATTTGACGTTCTTTTTCTTTTC
GCCTGCAGAAAATTGAGTAGTTCGCTGCCGGTGCATGGACGTAACCAATT
GACGTGCCGCCTTGGTGCCGGCGGTTTCGTCTGCCGTGGAAGGACCTTGT
TTTTGTATCTTTGAGGCTCTGTCAACTGGAGCCGCCTTTTGGCTGCGGGC
GGCGCCCTCACCATTTTATGTATATTCATCGTCCTGTTTCCTGTAGCCGT
CGAGTCTTGGCAGTTTGAGCGACGCCAGGCGCCCGGTGTTGTGTGCTACG
CACGGTTGCGTGCTAGCACACTTTGTTGTATGGCACCTTGGTTTTAGCCT
TGAGGGGGTTCGCAATGTGTATCTAAGCTGTGAAGCTGAAAGAAAAGAAG
ACGATTAATTTACCTTCTTCGAGTACGATGGTGGGCAGCACGACCTACTT
TCGGGCCTATTTTTCGAGACTTGAGTAGAGCACGAGCACGCGCTCGAGTT
CAACCGAATCTCAGCCTCGAATCCCAATGAACAGGACCCTTTCCTCTCGT
TGATGCTGCCGGCGTCGTCTCTCCGCCCTTGTACCTCTTTCAACCTGGTA
CCTTGGAATGTACAGATGGAGCTGCTGTATATTGGTGCTGCATTCAACAA
GAAAATATTGTTTCTCTCTGCGGTGCACCCAAATGTGACCTCGTGCGTGA
CCGACGAGCAATACGCACCGCACCAAAACCGTTTGCGTGGCAGAGAGAGG
C back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig9846:801..4951+
>mRNA_E_fasciculatus_S2_contig9846.17851.1 ID=mRNA_E_fasciculatus_S2_contig9846.17851.1|Name=mRNA_E_fasciculatus_S2_contig9846.17851.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=1563bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig9846:801..4951+ (Ectocarpus fasciculatus EfasUO2) back to top