mRNA_E_fasciculatus_S2_contig9846.17851.1 (mRNA) Ectocarpus fasciculatus EfasUO2
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig9846.17851.1 vs.
Match: Arf-GAP (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3P5_9PHAE) HSP 1 Score: 438 bits (1126), Expect = 4.290e-142 Identity = 339/489 (69.33%), Postives = 343/489 (70.14%), Query Frame = 1 Query: 1 MSEQALRKRLEALVKTGENRFCADCGKREPRWASVNLGLFICLDCSGIHRNLGVHISFVRSVNLDTWKPAQVKGMEEMGNERAKAHFEAEVPASYTVPREHATVREREKWIRDKYEHRRFVSRDPQPARQRKPEESTGSRSSRKDSGATSXXXXXXXXXXXXXXXXXXXXXXXTSTAPSPAXXXXASSTTTRVVPRLQKAGTGAVKAASXXXXXXXXXXXXXXXPAVDLLDFSEPAPPQAPPRASPPPLRASSAPPTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSILSMFNSPAAGGGVAGRGMAGAVGSSPVAGVMKTPELNQVSQMMSTLNVGGVAPMGSQQMGMPGAGGWAQQQKHQPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKNQGGLNAGATGGAMFGVGQAGGHQQQPQGMGVATNGSGFAGLRGG 1467
M+EQALRKRLEALVKTGENRFCADCGKREPRWASVNLGLFICLDCSGIHRNLGVHISFVRSVNLDTWKPAQV+GMEEMGNERAKAHFEAEVPASYTVPREHATVREREKWIRDKYEHRRFVSR PQPARQRKPEESTGSRSSR DSGA S XXXXXXXXXXXXXXXXXX AP XXXX TTTR VPRLQKAGTGAVKAAS PAVDLLDFSEP PPQAP XXX XX XXXXXXXX SILSMFNSPA GGG GR MAG VGSSPV GVMKTPELNQVSQMMSTLNVGG+APMGSQQMGMPGAGGW QQQ XXXXXXXXXX XXXXXXXXXXXXXX K GG AGA+GGA GVGQAGG QQ PQGM A NGSG GLRGG
Sbjct: 1 MTEQALRKRLEALVKTGENRFCADCGKREPRWASVNLGLFICLDCSGIHRNLGVHISFVRSVNLDTWKPAQVQGMEEMGNERAKAHFEAEVPASYTVPREHATVREREKWIRDKYEHRRFVSRSPQPARQRKPEESTGSRSSRMDSGAASSKSPTXXXXXXXXXXXXXXXXXXXXXAPXXXXXXXXXXTTTRAVPRLQKAGTGAVKAASAAAAAPSAVPA----PAVDLLDFSEPVPPQAPXXXXXXXXXXXXXX-XXXXMDQMFEFSDFQSAPSSSPGATVPAAAALVGSQQQQQPATVQQPXXQSXXXXXXXXAAGAPGKASAASILSMFNSPA-GGGAVGRSMAGPVGSSPVTGVMKTPELNQVSQMMSTLNVGGLAPMGSQQMGMPGAGGWTQQQXXX-XXXXXXXXXXWAQQQKLQQLLQQXXXXXXXXXXXXXXLQQKIHGG--AGASGGAKSGVGQAGGDQQHPQGMDAAPNGSGLTGLRGG 480
BLAST of mRNA_E_fasciculatus_S2_contig9846.17851.1 vs.
Match: Arf-GAP (domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBT0_ECTSI) HSP 1 Score: 405 bits (1040), Expect = 5.320e-131 Identity = 304/390 (77.95%), Postives = 306/390 (78.46%), Query Frame = 1 Query: 1 MSEQALRKRLEALVKTGENRFCADCGKREPRWASVNLGLFICLDCSGIHRNLGVHISFVRSVNLDTWKPAQVKGMEEMGNERAKAHFEAEVPASYTVPREHATVREREKWIRDKYEHRRFVSRDPQPARQRKPEESTGSRSSRKDSGATSXXXXXXXXXXXXXXXXXXXXXXXTSTAPSPAXXXXASSTTTRVVPRLQKAGTGAVKAASXXXXXXXXXXXXXXXPAVDLLDFSEPAPPQAPPRASPPPLRASSAPPTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSILSMFNSPAAGGGVAGRGMAGAVGSSPVAGVMKTPELNQVSQMMSTLNVGGVAPMGSQQMGMP 1170
MSEQALRKRLEALVKTGENRFCADCGKREPRWASVNLGLFICLDCSGIHRNLGVHISFVRSVNLDTWKPAQVKGMEEMGNERAKAHFEAEVPASYTVPREHATVREREKWIRDKYEHRRFVSR+PQPARQRKPEESTGSRSSRKDSGA XXXXXXXXXXXXXXXXXXXXXXX AP XXXX TTR VPRLQKAGTGAVKAAS XXXXXXXXXXXXX PAVDLLDFSEPAPPQAP XXXX XXXXX XXXXXXXXXX SILSMFNSPA GGGVAGR MAG VGSSPVAGVMKTPELNQVSQMMSTLNVGG+APMGSQQMGMP
Sbjct: 1 MSEQALRKRLEALVKTGENRFCADCGKREPRWASVNLGLFICLDCSGIHRNLGVHISFVRSVNLDTWKPAQVKGMEEMGNERAKAHFEAEVPASYTVPREHATVREREKWIRDKYEHRRFVSRNPQPARQRKPEESTGSRSSRKDSGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPXXXXXXXXXXXTTRAVPRLQKAGTGAVKAASTXXXXXXXXXXXXXAPAVDLLDFSEPAPPQAPXXXXXXXXXXXXX--XXXXXADQMFEFSDFQSAPSSSSGATVPXXXXXVGSQQQPAAVQQPASQSGXXXXXXXXXXGAPGKASAASILSMFNSPA-GGGVAGRSMAGPVGSSPVAGVMKTPELNQVSQMMSTLNVGGLAPMGSQQMGMP 387
BLAST of mRNA_E_fasciculatus_S2_contig9846.17851.1 vs.
Match: Arf-GAP (domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8F7_9STRA) HSP 1 Score: 182 bits (461), Expect = 3.020e-50 Identity = 87/119 (73.11%), Postives = 99/119 (83.19%), Query Frame = 1 Query: 19 RKRLEALVKTGENRFCADCGKREPRWASVNLGLFICLDCSGIHRNLGVHISFVRSVNLDTWKPAQVKGMEEMGNERAKAHFEAEVPASYTVPREHATVREREKWIRDKYEHRRFVSRDP 375
+KRLEALVK +NRFCADCG REPRWASVNLGLFICL CSGIHRNLGVHISFVRSVNLDTWK QV ME +GN RAKA++EA VP VP E ++VRE +KWIR KYEH+R+++R P
Sbjct: 7 KKRLEALVKREDNRFCADCGCREPRWASVNLGLFICLGCSGIHRNLGVHISFVRSVNLDTWKTEQVDKMERIGNARAKAYYEANVPPGTPVPTESSSVRELDKWIRSKYEHKRYIARGP 125
BLAST of mRNA_E_fasciculatus_S2_contig9846.17851.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UXM8_HETAK) HSP 1 Score: 180 bits (456), Expect = 3.710e-49 Identity = 83/128 (64.84%), Postives = 103/128 (80.47%), Query Frame = 1 Query: 4 SEQALRKRLEALVKTGENRFCADCGKREPRWASVNLGLFICLDCSGIHRNLGVHISFVRSVNLDTWKPAQVKGMEEMGNERAKAHFEAEVPASYTVPREHATVREREKWIRDKYEHRRFVSRDPQPAR 387
SE+ ++RL AL K EN+FC DCG REPRWAS LG+F+C+ CSGIHRNLGVHISFVRSVNLD+W+ V+ ME GN RA+A+FEAEVP++Y +P E +T RE EKWIRDKYEHRRF++R+P P +
Sbjct: 15 SEEDHKRRLTALTKKDENKFCIDCGAREPRWASATLGVFMCIRCSGIHRNLGVHISFVRSVNLDSWREDHVQRMERWGNGRARAYFEAEVPSNYPIPGERSTTREVEKWIRDKYEHRRFLAREPPPGK 142
BLAST of mRNA_E_fasciculatus_S2_contig9846.17851.1 vs.
Match: Hypothetical (protein (Fragment) n=2 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UT74_9STRA) HSP 1 Score: 175 bits (443), Expect = 3.870e-44 Identity = 81/124 (65.32%), Postives = 100/124 (80.65%), Query Frame = 1 Query: 4 SEQALRKRLEALVKTGENRFCADCGKREPRWASVNLGLFICLDCSGIHRNLGVHISFVRSVNLDTWKPAQVKGMEEMGNERAKAHFEAEVPASYTVPREHATVREREKWIRDKYEHRRFVSRDP 375
S Q + RLEA+VK+G+N+FCADCG REPRWAS LG+FIC+ CSGIHRNLGVHISFVRSVNLDTWK V+ ME GN RA +FEA+VP +Y +P E ++ RE E+WIRDKYE+R+F +R+P
Sbjct: 15 SHQDHKVRLEAMVKSGDNKFCADCGAREPRWASATLGVFICIRCSGIHRNLGVHISFVRSVNLDTWKEDHVRKMEAWGNARAAEYFEADVPPNYRIPDEKSSTRELERWIRDKYEYRKFAARNP 138
BLAST of mRNA_E_fasciculatus_S2_contig9846.17851.1 vs.
Match: Arf-GAP (domain-containing protein (Fragment) n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G5A4X3_PHYSP) HSP 1 Score: 166 bits (420), Expect = 4.000e-44 Identity = 75/120 (62.50%), Postives = 96/120 (80.00%), Query Frame = 1 Query: 16 LRKRLEALVKTGENRFCADCGKREPRWASVNLGLFICLDCSGIHRNLGVHISFVRSVNLDTWKPAQVKGMEEMGNERAKAHFEAEVPASYTVPREHATVREREKWIRDKYEHRRFVSRDP 375
L+K+L L+K EN+FCADCG R PRWAS+NLG+FIC+ CSGIHR+LGVH++FVRSVNLD+W QV+ M+ GN RAKA++EA VP Y +P EH++VRE+E WIR+KYE +RFV P
Sbjct: 16 LKKQLNELMKLEENKFCADCGCRGPRWASINLGVFICIACSGIHRSLGVHLTFVRSVNLDSWTSEQVQQMQRWGNARAKAYYEANVPRDYRIPTEHSSVREKEMWIREKYERKRFVGEAP 135
BLAST of mRNA_E_fasciculatus_S2_contig9846.17851.1 vs.
Match: Arf-GAP (domain-containing protein n=1 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RQV0_9STRA) HSP 1 Score: 172 bits (435), Expect = 1.070e-43 Identity = 77/120 (64.17%), Postives = 99/120 (82.50%), Query Frame = 1 Query: 16 LRKRLEALVKTGENRFCADCGKREPRWASVNLGLFICLDCSGIHRNLGVHISFVRSVNLDTWKPAQVKGMEEMGNERAKAHFEAEVPASYTVPREHATVREREKWIRDKYEHRRFVSRDP 375
L+K+L L+K EN+FCADCG R PRWAS+NLG+FIC+ CSGIHR+LGVH++FVRSVNLD+W P QV+ M+ GN RAKA++EA VP Y +P EHA+VRE+E WIR+KYE +RFV ++P
Sbjct: 15 LKKKLNELMKLEENKFCADCGCRGPRWASINLGVFICIACSGIHRSLGVHLTFVRSVNLDSWTPEQVQQMQRWGNGRAKAYYEATVPRDYRIPTEHASVREKEMWIREKYERKRFVGQEP 134
BLAST of mRNA_E_fasciculatus_S2_contig9846.17851.1 vs.
Match: Arf-GAP (domain-containing protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4C531_HYAAE) HSP 1 Score: 169 bits (427), Expect = 2.310e-42 Identity = 76/116 (65.52%), Postives = 96/116 (82.76%), Query Frame = 1 Query: 16 LRKRLEALVKTGENRFCADCGKREPRWASVNLGLFICLDCSGIHRNLGVHISFVRSVNLDTWKPAQVKGMEEMGNERAKAHFEAEVPASYTVPREHATVREREKWIRDKYEHRRFV 363
L+K+L L+K EN+FCADCG R PRWAS+NLG+FIC+ CSGIHR+LGVH++FVRSVNLD+W QV+ M+ GN RAKAHFEA +P+ Y VP EH++VR++E WIRDKYE +RFV
Sbjct: 17 LKKQLNELMKREENKFCADCGSRGPRWASINLGVFICIACSGIHRSLGVHVTFVRSVNLDSWTTEQVQQMQRWGNARAKAHFEAALPSDYFVPSEHSSVRDKELWIRDKYERKRFV 132
BLAST of mRNA_E_fasciculatus_S2_contig9846.17851.1 vs.
Match: Arf-GAP (domain-containing protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WQC6_9STRA) HSP 1 Score: 167 bits (423), Expect = 5.400e-42 Identity = 76/125 (60.80%), Postives = 98/125 (78.40%), Query Frame = 1 Query: 16 LRKRLEALVKTGENRFCADCGKREPRWASVNLGLFICLDCSGIHRNLGVHISFVRSVNLDTWKPAQVKGMEEMGNERAKAHFEAEVPASYTVPREHATVREREKWIRDKYEHRRFVSRDPQPARQ 390
L+K+L L+K EN+FCADCG R PRWAS+NLG+FIC+ CSGIHR+LGVH++FVRSVNLD+W P QV M+ GN +AK ++EA VP Y VP EH++VRE+E WIR+KYE +RFV P+ R+
Sbjct: 13 LKKQLNELMKLEENKFCADCGCRGPRWASINLGVFICIACSGIHRSLGVHLTFVRSVNLDSWTPEQVAQMQRWGNAKAKGYYEANVPRDYRVPTEHSSVREKEMWIREKYERKRFVGEAPREERE 137
BLAST of mRNA_E_fasciculatus_S2_contig9846.17851.1 vs.
Match: Arf-GAP (domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3G6B5_PHYRM) HSP 1 Score: 158 bits (400), Expect = 5.470e-42 Identity = 70/111 (63.06%), Postives = 89/111 (80.18%), Query Frame = 1 Query: 28 LEALVKTGENRFCADCGKREPRWASVNLGLFICLDCSGIHRNLGVHISFVRSVNLDTWKPAQVKGMEEMGNERAKAHFEAEVPASYTVPREHATVREREKWIRDKYEHRRF 360
L L+K EN+FCADCG R PRWAS+NLG+FIC+ CSGIHR+LGVH++FVRSVNLD+W P QV+ M+ GN RAK ++EA VP + +P EH+ VR++E WIRDKYE +RF
Sbjct: 1 LNDLMKLEENKFCADCGCRGPRWASINLGVFICIACSGIHRSLGVHLTFVRSVNLDSWTPEQVQQMQRWGNGRAKGYYEANVPRDFRIPTEHSAVRDKEMWIRDKYERKRF 111 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig9846.17851.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig9846.17851.1 >prot_E_fasciculatus_S2_contig9846.17851.1 ID=prot_E_fasciculatus_S2_contig9846.17851.1|Name=mRNA_E_fasciculatus_S2_contig9846.17851.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=521bp MSEQALRKRLEALVKTGENRFCADCGKREPRWASVNLGLFICLDCSGIHRback to top mRNA from alignment at E_fasciculatus_S2_contig9846:801..4951+ Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig9846.17851.1 ID=mRNA_E_fasciculatus_S2_contig9846.17851.1|Name=mRNA_E_fasciculatus_S2_contig9846.17851.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=4151bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig9846:801..4951+ (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig9846:801..4951+ >mRNA_E_fasciculatus_S2_contig9846.17851.1 ID=mRNA_E_fasciculatus_S2_contig9846.17851.1|Name=mRNA_E_fasciculatus_S2_contig9846.17851.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=1563bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig9846:801..4951+ (Ectocarpus fasciculatus EfasUO2)back to top |