mRNA_E_fasciculatus_S2_contig9846.17851.1 (mRNA) Ectocarpus fasciculatus EfasUO2

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E_fasciculatus_S2_contig9846.17851.1
Unique NamemRNA_E_fasciculatus_S2_contig9846.17851.1
TypemRNA
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Homology
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BLAST of mRNA_E_fasciculatus_S2_contig9846.17851.1 vs.
Match: Arf-GAP (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3P5_9PHAE)

HSP 1 Score: 438 bits (1126), Expect = 4.290e-142
Identity = 339/489 (69.33%), Postives = 343/489 (70.14%), Query Frame = 1 
Query:    1 MSEQALRKRLEALVKTGENRFCADCGKREPRWASVNLGLFICLDCSGIHRNLGVHISFVRSVNLDTWKPAQVKGMEEMGNERAKAHFEAEVPASYTVPREHATVREREKWIRDKYEHRRFVSRDPQPARQRKPEESTGSRSSRKDSGATSXXXXXXXXXXXXXXXXXXXXXXXTSTAPSPAXXXXASSTTTRVVPRLQKAGTGAVKAASXXXXXXXXXXXXXXXPAVDLLDFSEPAPPQAPPRASPPPLRASSAPPTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSILSMFNSPAAGGGVAGRGMAGAVGSSPVAGVMKTPELNQVSQMMSTLNVGGVAPMGSQQMGMPGAGGWAQQQKHQPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKNQGGLNAGATGGAMFGVGQAGGHQQQPQGMGVATNGSGFAGLRGG 1467
            M+EQALRKRLEALVKTGENRFCADCGKREPRWASVNLGLFICLDCSGIHRNLGVHISFVRSVNLDTWKPAQV+GMEEMGNERAKAHFEAEVPASYTVPREHATVREREKWIRDKYEHRRFVSR PQPARQRKPEESTGSRSSR DSGA S     XXXXXXXXXXXXXXXXXX   AP   XXXX   TTTR VPRLQKAGTGAVKAAS               PAVDLLDFSEP PPQAP                XXX                                           XX  XXXXXXXX           SILSMFNSPA GGG  GR MAG VGSSPV GVMKTPELNQVSQMMSTLNVGG+APMGSQQMGMPGAGGW QQQ    XXXXXXXXXX             XXXXXXXXXXXXXX   K  GG  AGA+GGA  GVGQAGG QQ PQGM  A NGSG  GLRGG
Sbjct:    1 MTEQALRKRLEALVKTGENRFCADCGKREPRWASVNLGLFICLDCSGIHRNLGVHISFVRSVNLDTWKPAQVQGMEEMGNERAKAHFEAEVPASYTVPREHATVREREKWIRDKYEHRRFVSRSPQPARQRKPEESTGSRSSRMDSGAASSKSPTXXXXXXXXXXXXXXXXXXXXXAPXXXXXXXXXXTTTRAVPRLQKAGTGAVKAASAAAAAPSAVPA----PAVDLLDFSEPVPPQAPXXXXXXXXXXXXXX-XXXXMDQMFEFSDFQSAPSSSPGATVPAAAALVGSQQQQQPATVQQPXXQSXXXXXXXXAAGAPGKASAASILSMFNSPA-GGGAVGRSMAGPVGSSPVTGVMKTPELNQVSQMMSTLNVGGLAPMGSQQMGMPGAGGWTQQQXXX-XXXXXXXXXXWAQQQKLQQLLQQXXXXXXXXXXXXXXLQQKIHGG--AGASGGAKSGVGQAGGDQQHPQGMDAAPNGSGLTGLRGG 480
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BLAST of mRNA_E_fasciculatus_S2_contig9846.17851.1 vs.
Match: Arf-GAP (domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBT0_ECTSI)

HSP 1 Score: 405 bits (1040), Expect = 5.320e-131
Identity = 304/390 (77.95%), Postives = 306/390 (78.46%), Query Frame = 1 
Query:    1 MSEQALRKRLEALVKTGENRFCADCGKREPRWASVNLGLFICLDCSGIHRNLGVHISFVRSVNLDTWKPAQVKGMEEMGNERAKAHFEAEVPASYTVPREHATVREREKWIRDKYEHRRFVSRDPQPARQRKPEESTGSRSSRKDSGATSXXXXXXXXXXXXXXXXXXXXXXXTSTAPSPAXXXXASSTTTRVVPRLQKAGTGAVKAASXXXXXXXXXXXXXXXPAVDLLDFSEPAPPQAPPRASPPPLRASSAPPTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSILSMFNSPAAGGGVAGRGMAGAVGSSPVAGVMKTPELNQVSQMMSTLNVGGVAPMGSQQMGMP 1170
            MSEQALRKRLEALVKTGENRFCADCGKREPRWASVNLGLFICLDCSGIHRNLGVHISFVRSVNLDTWKPAQVKGMEEMGNERAKAHFEAEVPASYTVPREHATVREREKWIRDKYEHRRFVSR+PQPARQRKPEESTGSRSSRKDSGA  XXXXXXXXXXXXXXXXXXXXXXX   AP   XXXX    TTR VPRLQKAGTGAVKAAS XXXXXXXXXXXXX PAVDLLDFSEPAPPQAP                XXXX                       XXXXX                  XXXXXXXXXX         SILSMFNSPA GGGVAGR MAG VGSSPVAGVMKTPELNQVSQMMSTLNVGG+APMGSQQMGMP
Sbjct:    1 MSEQALRKRLEALVKTGENRFCADCGKREPRWASVNLGLFICLDCSGIHRNLGVHISFVRSVNLDTWKPAQVKGMEEMGNERAKAHFEAEVPASYTVPREHATVREREKWIRDKYEHRRFVSRNPQPARQRKPEESTGSRSSRKDSGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPXXXXXXXXXXXTTRAVPRLQKAGTGAVKAASTXXXXXXXXXXXXXAPAVDLLDFSEPAPPQAPXXXXXXXXXXXXX--XXXXXADQMFEFSDFQSAPSSSSGATVPXXXXXVGSQQQPAAVQQPASQSGXXXXXXXXXXGAPGKASAASILSMFNSPA-GGGVAGRSMAGPVGSSPVAGVMKTPELNQVSQMMSTLNVGGLAPMGSQQMGMP 387
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig9846.17851.1 vs.
Match: Arf-GAP (domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8F7_9STRA)

HSP 1 Score: 182 bits (461), Expect = 3.020e-50
Identity = 87/119 (73.11%), Postives = 99/119 (83.19%), Query Frame = 1 
Query:   19 RKRLEALVKTGENRFCADCGKREPRWASVNLGLFICLDCSGIHRNLGVHISFVRSVNLDTWKPAQVKGMEEMGNERAKAHFEAEVPASYTVPREHATVREREKWIRDKYEHRRFVSRDP 375
            +KRLEALVK  +NRFCADCG REPRWASVNLGLFICL CSGIHRNLGVHISFVRSVNLDTWK  QV  ME +GN RAKA++EA VP    VP E ++VRE +KWIR KYEH+R+++R P
Sbjct:    7 KKRLEALVKREDNRFCADCGCREPRWASVNLGLFICLGCSGIHRNLGVHISFVRSVNLDTWKTEQVDKMERIGNARAKAYYEANVPPGTPVPTESSSVRELDKWIRSKYEHKRYIARGP 125
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BLAST of mRNA_E_fasciculatus_S2_contig9846.17851.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UXM8_HETAK)

HSP 1 Score: 180 bits (456), Expect = 3.710e-49
Identity = 83/128 (64.84%), Postives = 103/128 (80.47%), Query Frame = 1 
Query:    4 SEQALRKRLEALVKTGENRFCADCGKREPRWASVNLGLFICLDCSGIHRNLGVHISFVRSVNLDTWKPAQVKGMEEMGNERAKAHFEAEVPASYTVPREHATVREREKWIRDKYEHRRFVSRDPQPAR 387
            SE+  ++RL AL K  EN+FC DCG REPRWAS  LG+F+C+ CSGIHRNLGVHISFVRSVNLD+W+   V+ ME  GN RA+A+FEAEVP++Y +P E +T RE EKWIRDKYEHRRF++R+P P +
Sbjct:   15 SEEDHKRRLTALTKKDENKFCIDCGAREPRWASATLGVFMCIRCSGIHRNLGVHISFVRSVNLDSWREDHVQRMERWGNGRARAYFEAEVPSNYPIPGERSTTREVEKWIRDKYEHRRFLAREPPPGK 142
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BLAST of mRNA_E_fasciculatus_S2_contig9846.17851.1 vs.
Match: Hypothetical (protein (Fragment) n=2 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UT74_9STRA)

HSP 1 Score: 175 bits (443), Expect = 3.870e-44
Identity = 81/124 (65.32%), Postives = 100/124 (80.65%), Query Frame = 1 
Query:    4 SEQALRKRLEALVKTGENRFCADCGKREPRWASVNLGLFICLDCSGIHRNLGVHISFVRSVNLDTWKPAQVKGMEEMGNERAKAHFEAEVPASYTVPREHATVREREKWIRDKYEHRRFVSRDP 375
            S Q  + RLEA+VK+G+N+FCADCG REPRWAS  LG+FIC+ CSGIHRNLGVHISFVRSVNLDTWK   V+ ME  GN RA  +FEA+VP +Y +P E ++ RE E+WIRDKYE+R+F +R+P
Sbjct:   15 SHQDHKVRLEAMVKSGDNKFCADCGAREPRWASATLGVFICIRCSGIHRNLGVHISFVRSVNLDTWKEDHVRKMEAWGNARAAEYFEADVPPNYRIPDEKSSTRELERWIRDKYEYRKFAARNP 138
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig9846.17851.1 vs.
Match: Arf-GAP (domain-containing protein (Fragment) n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G5A4X3_PHYSP)

HSP 1 Score: 166 bits (420), Expect = 4.000e-44
Identity = 75/120 (62.50%), Postives = 96/120 (80.00%), Query Frame = 1 
Query:   16 LRKRLEALVKTGENRFCADCGKREPRWASVNLGLFICLDCSGIHRNLGVHISFVRSVNLDTWKPAQVKGMEEMGNERAKAHFEAEVPASYTVPREHATVREREKWIRDKYEHRRFVSRDP 375
            L+K+L  L+K  EN+FCADCG R PRWAS+NLG+FIC+ CSGIHR+LGVH++FVRSVNLD+W   QV+ M+  GN RAKA++EA VP  Y +P EH++VRE+E WIR+KYE +RFV   P
Sbjct:   16 LKKQLNELMKLEENKFCADCGCRGPRWASINLGVFICIACSGIHRSLGVHLTFVRSVNLDSWTSEQVQQMQRWGNARAKAYYEANVPRDYRIPTEHSSVREKEMWIREKYERKRFVGEAP 135
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig9846.17851.1 vs.
Match: Arf-GAP (domain-containing protein n=1 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RQV0_9STRA)

HSP 1 Score: 172 bits (435), Expect = 1.070e-43
Identity = 77/120 (64.17%), Postives = 99/120 (82.50%), Query Frame = 1 
Query:   16 LRKRLEALVKTGENRFCADCGKREPRWASVNLGLFICLDCSGIHRNLGVHISFVRSVNLDTWKPAQVKGMEEMGNERAKAHFEAEVPASYTVPREHATVREREKWIRDKYEHRRFVSRDP 375
            L+K+L  L+K  EN+FCADCG R PRWAS+NLG+FIC+ CSGIHR+LGVH++FVRSVNLD+W P QV+ M+  GN RAKA++EA VP  Y +P EHA+VRE+E WIR+KYE +RFV ++P
Sbjct:   15 LKKKLNELMKLEENKFCADCGCRGPRWASINLGVFICIACSGIHRSLGVHLTFVRSVNLDSWTPEQVQQMQRWGNGRAKAYYEATVPRDYRIPTEHASVREKEMWIREKYERKRFVGQEP 134
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig9846.17851.1 vs.
Match: Arf-GAP (domain-containing protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4C531_HYAAE)

HSP 1 Score: 169 bits (427), Expect = 2.310e-42
Identity = 76/116 (65.52%), Postives = 96/116 (82.76%), Query Frame = 1 
Query:   16 LRKRLEALVKTGENRFCADCGKREPRWASVNLGLFICLDCSGIHRNLGVHISFVRSVNLDTWKPAQVKGMEEMGNERAKAHFEAEVPASYTVPREHATVREREKWIRDKYEHRRFV 363
            L+K+L  L+K  EN+FCADCG R PRWAS+NLG+FIC+ CSGIHR+LGVH++FVRSVNLD+W   QV+ M+  GN RAKAHFEA +P+ Y VP EH++VR++E WIRDKYE +RFV
Sbjct:   17 LKKQLNELMKREENKFCADCGSRGPRWASINLGVFICIACSGIHRSLGVHVTFVRSVNLDSWTTEQVQQMQRWGNARAKAHFEAALPSDYFVPSEHSSVRDKELWIRDKYERKRFV 132
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig9846.17851.1 vs.
Match: Arf-GAP (domain-containing protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WQC6_9STRA)

HSP 1 Score: 167 bits (423), Expect = 5.400e-42
Identity = 76/125 (60.80%), Postives = 98/125 (78.40%), Query Frame = 1 
Query:   16 LRKRLEALVKTGENRFCADCGKREPRWASVNLGLFICLDCSGIHRNLGVHISFVRSVNLDTWKPAQVKGMEEMGNERAKAHFEAEVPASYTVPREHATVREREKWIRDKYEHRRFVSRDPQPARQ 390
            L+K+L  L+K  EN+FCADCG R PRWAS+NLG+FIC+ CSGIHR+LGVH++FVRSVNLD+W P QV  M+  GN +AK ++EA VP  Y VP EH++VRE+E WIR+KYE +RFV   P+  R+
Sbjct:   13 LKKQLNELMKLEENKFCADCGCRGPRWASINLGVFICIACSGIHRSLGVHLTFVRSVNLDSWTPEQVAQMQRWGNAKAKGYYEANVPRDYRVPTEHSSVREKEMWIREKYERKRFVGEAPREERE 137
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig9846.17851.1 vs.
Match: Arf-GAP (domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3G6B5_PHYRM)

HSP 1 Score: 158 bits (400), Expect = 5.470e-42
Identity = 70/111 (63.06%), Postives = 89/111 (80.18%), Query Frame = 1 
Query:   28 LEALVKTGENRFCADCGKREPRWASVNLGLFICLDCSGIHRNLGVHISFVRSVNLDTWKPAQVKGMEEMGNERAKAHFEAEVPASYTVPREHATVREREKWIRDKYEHRRF 360
            L  L+K  EN+FCADCG R PRWAS+NLG+FIC+ CSGIHR+LGVH++FVRSVNLD+W P QV+ M+  GN RAK ++EA VP  + +P EH+ VR++E WIRDKYE +RF
Sbjct:    1 LNDLMKLEENKFCADCGCRGPRWASINLGVFICIACSGIHRSLGVHLTFVRSVNLDSWTPEQVQQMQRWGNGRAKGYYEANVPRDFRIPTEHSAVRDKEMWIRDKYERKRF 111
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig9846.17851.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Arf-GAP4.290e-14269.33domain-containing protein n=1 Tax=Ectocarpus sp. C... [more]
Arf-GAP5.320e-13177.95domain-containing protein n=1 Tax=Ectocarpus silic... [more]
Arf-GAP3.020e-5073.11domain-containing protein (Fragment) n=1 Tax=Tribo... [more]
Hypothetical3.710e-4964.84protein (Fragment) n=1 Tax=Heterosigma akashiwo Ta... [more]
Hypothetical3.870e-4465.32protein (Fragment) n=2 Tax=Fibrocapsa japonica Tax... [more]
Arf-GAP4.000e-4462.50domain-containing protein (Fragment) n=1 Tax=Phyto... [more]
Arf-GAP1.070e-4364.17domain-containing protein n=1 Tax=Phytophthora ker... [more]
Arf-GAP2.310e-4265.52domain-containing protein n=1 Tax=Hyaloperonospora... [more]
Arf-GAP5.400e-4260.80domain-containing protein n=1 Tax=Phytophthora meg... [more]
Arf-GAP5.470e-4263.06domain-containing protein n=1 Tax=Phytophthora ram... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig9846contigE_fasciculatus_S2_contig9846:801..4951 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score409.8
Seed ortholog evalue1.9e-111
Seed eggNOG ortholog2880.D8LBT0
Preferred nameAGD15
Model size2436
KEGG koko:K12486
KEGG Pathwayko04144,map04144
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0001558,GO:0003006,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005768,GO:0005794,GO:0005802,GO:0005829,GO:0006810,GO:0007275,GO:0008150,GO:0009791,GO:0009838,GO:0009908,GO:0009987,GO:0010227,GO:0012505,GO:0016043,GO:0016192,GO:0022414,GO:0022607,GO:0030135,GO:0030136,GO:0030276,GO:0030308,GO:0031410,GO:0031982,GO:0031984,GO:0032501,GO:0032502,GO:0034622,GO:0035459,GO:0035652,GO:0040008,GO:0043085,GO:0043087,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043547,GO:0043933,GO:0044085,GO:0044093,GO:0044422,GO:0044424,GO:0044431,GO:0044444,GO:0044446,GO:0044464,GO:0045926,GO:0048367,GO:0048437,GO:0048519,GO:0048523,GO:0048608,GO:0048731,GO:0048856,GO:0050789,GO:0050790,GO:0050794,GO:0051128,GO:0051179,GO:0051234,GO:0051336,GO:0051345,GO:0060858,GO:0061458,GO:0065003,GO:0065007,GO:0065009,GO:0071840,GO:0090567,GO:0090630,GO:0097708,GO:0098791,GO:0099402
Exons6
EggNOG free text desc.GTPase activator activity
EggNOG OGsCOG5347@1,KOG0703@2759
Ec32 ortholog descriptionArf GTPase activating protein
Ec32 orthologEc-27_002820.1
Cds size1563
COG Functional cat.U
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko04131
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig9846.17851.1prot_E_fasciculatus_S2_contig9846.17851.1Ectocarpus fasciculatus EfasUO2polypeptideE_fasciculatus_S2_contig9846 801..4078 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842628.0395079-CDS-E_fasciculatus_S2_contig9846:800..8851696842628.0395079-CDS-E_fasciculatus_S2_contig9846:800..885Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig9846 801..885 +
1696842628.0580454-CDS-E_fasciculatus_S2_contig9846:1371..15051696842628.0580454-CDS-E_fasciculatus_S2_contig9846:1371..1505Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig9846 1372..1505 +
1696842628.0693474-CDS-E_fasciculatus_S2_contig9846:1985..21941696842628.0693474-CDS-E_fasciculatus_S2_contig9846:1985..2194Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig9846 1986..2194 +
1696842628.0803127-CDS-E_fasciculatus_S2_contig9846:2520..30581696842628.0803127-CDS-E_fasciculatus_S2_contig9846:2520..3058Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig9846 2521..3058 +
1696842628.09059-CDS-E_fasciculatus_S2_contig9846:3280..34841696842628.09059-CDS-E_fasciculatus_S2_contig9846:3280..3484Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig9846 3281..3484 +
1696842628.1048021-CDS-E_fasciculatus_S2_contig9846:3685..40781696842628.1048021-CDS-E_fasciculatus_S2_contig9846:3685..4078Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig9846 3686..4078 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842628.12039-UTR-E_fasciculatus_S2_contig9846:4078..49511696842628.12039-UTR-E_fasciculatus_S2_contig9846:4078..4951Ectocarpus fasciculatus EfasUO2UTRE_fasciculatus_S2_contig9846 4079..4951 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E_fasciculatus_S2_contig9846.17851.1

>prot_E_fasciculatus_S2_contig9846.17851.1 ID=prot_E_fasciculatus_S2_contig9846.17851.1|Name=mRNA_E_fasciculatus_S2_contig9846.17851.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=521bp
MSEQALRKRLEALVKTGENRFCADCGKREPRWASVNLGLFICLDCSGIHR
NLGVHISFVRSVNLDTWKPAQVKGMEEMGNERAKAHFEAEVPASYTVPRE
HATVREREKWIRDKYEHRRFVSRDPQPARQRKPEESTGSRSSRKDSGATS
SKSPTRKTGSSSSSRGAGRTSSSTSTAPSPAASKSASSTTTRVVPRLQKA
GTGAVKAASAAAAAAATAPAAVPAPAVDLLDFSEPAPPQAPPRASPPPLR
ASSAPPTPPADPMFEFSDFQSAPSSSSGATVPSAAASVGSQQQQQQQQQQ
QPAAQFGQQGQQEQPAAGAPGKASAASILSMFNSPAAGGGVAGRGMAGAV
GSSPVAGVMKTPELNQVSQMMSTLNVGGVAPMGSQQMGMPGAGGWAQQQK
HQPQQAQAQAMAWAQQQKLQQLQQQQQLLQRQQWQMQQQQQQQKNQGGLN
AGATGGAMFGVGQAGGHQQQPQGMGVATNGSGFAGLRGGGEGAAQGNGAT
VVMPGGFGAGAGGMGMGGLR*
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mRNA from alignment at E_fasciculatus_S2_contig9846:801..4951+

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E_fasciculatus_S2_contig9846.17851.1 ID=mRNA_E_fasciculatus_S2_contig9846.17851.1|Name=mRNA_E_fasciculatus_S2_contig9846.17851.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=4151bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig9846:801..4951+ (Ectocarpus fasciculatus EfasUO2)
ATGTCGGAACAGGCGCTCAGGAAGCGATTGGAGGCCTTGGTCAAGACGGG
AGAGAACCGCTTCTGCGCCGACTGCGGCAAGAGAGGTACGTGCGGCCTAA
CCTACACTTTGTCGTGATCGGTCTGCCTGGCATGGGTACGGCACAGAACC
AGTAGCAACACGGAGTACTCGATTGTCCTCCTCGGCTCCCAAAGGAATTT
CGTTGCTCTCTGTCTCCCTCTTTCTCTCCCGCAGCTGCTCTTAACTGCTG
TCCGGTTGGTTTGACGGGCATTCTGCCGCAAAAATATGATACGTCGTCTG
GCAGCTCATCCCCCCGATGAGATGAGGTGCACGTTTCAATGAAGCTCTTG
GTATCAGTAGGCCCCCAACCAAAGCATAAACGGGGGCATCGTCTAGACCA
CGGCACGCATCCCTCTCGCTGCTGTCGACATGCAACTCGCTCGCTGGGAA
CACGCCGTTGTATGCGTCCATCAATGCAATCAAACATGCATATGATAATT
GTTGAAGAAATTGTTTTGCTCTTTCCAAAACGTAATTGCTCTTGCCAAAA
CGTCGGGCTGCTGAACACCAGAGCCTCGCTGGGCCTCCGTCAATCTCGGG
CTGTTCATATGCCTGGATTGTTCTGGAATCCACCGCAACTTGGGGGTTCA
CATCTCGTTTGTTCGGAGCGTCAACCTGGACACTTGGAAGCCGGCTCAGG
TTAAGGTACGTGTGGACAGGTTAAGGTCGCGTGGACGGCAGGGACTGCTC
TCTTGGCTTGGGGCAGCAAGTGTGACTGGTAATGCTCTGCTGTTTTTGAA
GCCTACTTGTACTCCTAATTTCAGCAGTGCTGCGCTTCCGGCGGGCTTTT
TTTTTTCATGAACATGTTGCGTTGGCGAGGACTTCAAGACTTCACACAGC
CCCTTCGACTGCTTTGATTATATCTCGAAAGGGTAGTCTTTCTGTGTTTG
TATTTAGTTTTCCTAATACTCATGTACGGGGCCGGTACAAAGGCTTGCCA
TACAGCGGCTTGAAAAATTGCGAAAAACACGTTTCTGAAATTTTTGCGAA
AAAACGTTTCCCGCCGCACTTTTCTCACAATGATGTTGTACAATATGCAA
CCTGGATGTGTACTACGCATATTACTGCGGTACATTCGCGCGTGGTGGTT
GTGTACCCACGGATCCTTTCGTGTTTTTTTTCCAGGGCATGGAAGAGATG
GGAAACGAGCGCGCCAAGGCTCATTTCGAGGCCGAAGTGCCGGCCAGCTA
CACCGTGCCGCGAGAACACGCCACTGTCCGCGAGCGCGAGAAATGGATCC
GTGACAAGTACGAGCACAGGCGTTTCGTGTCGAGGGATCCCCAGCCTGCT
CGGCAGCGGAAACCGGAGGAGTCTACCGGCTCACGATCTTCGAGGTGCGA
GAGAAAGGAGGGAGAGCAAGTGGGGAGAGGGACGAAGTCGTGGACAGAGA
AAAGCAAGCAGGTCCTGCTGCTGGTTGGGTTTTCGCTCAGCCCTCTCGCT
TGTCACGAACACAGTCATCAGATGCGATTTCCTCGCCAAGGCCCGGCTGT
CTTGACCGCTTGAAACAGTTGACCACCTGAAACAGTGCGCGAGAACGAGC
GCCGAGCACCGACCCGCCGCAACCCCCGAGCACCTTCTCCTCCTTGAGGC
TTCTATAACAACACCTTGGTCTCACCACGCCTTACGTTGCATTGCCGACA
AAATAATTGACAAATATCAGGAAGGACAGCGGCGCAACCTCCTCCAAGTC
ACCCACGAGAAAGACCGGCAGCAGTAGCAGTAGCCGGGGGGCGGGGCGAA
CATCGTCCTCGACCTCCACGGCGCCGTCACCGGCCGCTTCCAAGTCTGCG
TCATCTACCACCACCAGGGTCGTGCCCCGCCTCCAGAAGGCCGGCACCGG
GGCAGTGAAGGCCGCTTCCGCCGCCGCTGCCGCCGCCGCCACCGCTCCGG
CCGCTGTCCCCGCCCCCGCGGTCGATCTCCTCGACTTCTCGGAGCCGGCC
CCGCCCCAGGCGCCGCCAAGAGCGTCGCCGCCGCCATTGAGGGCTTCGTC
GGCGCCGCCAACGCCACCGGCGGACCCGATGTTCGAATTCTCGGATTTCC
AGTCTGCGCCTTCTTCGTCGTCGGGGGCGACGGTACCGTCGGCTGCGGCG
TCGGTGGGATCCCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCCAGC
GGCGCAGTTTGGGCAGCAAGGGCAGCAGGAGCAACCGGCGGCAGGTGCCC
CTGGGAAGGTACGTGCGTTTTCGCTCCGCTTTGTAAGCGTCAGCAAGAAT
CGTTCGATCGAACCCAAAGAGTTGGGGGTGCTTGCTGTGGCCACTGCTGC
TGCTGCTGCTGCGGGGATGGGTTGCGTGACGTCCTCTGCACGATGCTTGT
GTTGTTTCTGGTTTCATCCATGTCCTCCTCCCCCCGACCTTGCCTGCCGT
CGCCGCTCCCGTCGATTTTTGTCCTCGCAGGCATCCGCCGCGTCGATTTT
GTCCATGTTTAACAGTCCCGCGGCCGGCGGCGGCGTCGCGGGCCGCGGTA
TGGCGGGGGCTGTTGGTTCATCCCCTGTAGCGGGGGTGATGAAAACCCCA
GAGCTGAACCAAGTGTCGCAGATGATGTCGACGCTGAACGTCGGGGGCGT
CGCGCCGATGGGCTCCCAGCAGATGGGCATGCCGGTGCGTCCTTGCGTGT
GGGTTGCTTTTTGTCGCGCGAGCGCATTTTTTTGCGCCTTTTGGCCGTCC
CAAATACATCGTTGCGCGTTTGGTGCACTTCGTCGCTCCGCAGAATCATC
GATGTGCTTTTTCGTGTCACGCGTTGAGAACCCTCACGTGTGCCTCATGC
GTCTGCCTGGCTGCACGCTTTCTTCGCATGCCCAGGGTGCCGGCGGTTGG
GCGCAGCAGCAAAAACACCAGCCCCAGCAGGCGCAGGCCCAGGCGATGGC
GTGGGCCCAGCAACAGAAGCTCCAGCAGCTGCAGCAACAGCAGCAGCTGC
TCCAGCGACAGCAATGGCAAATGCAGCAGCAGCAGCAGCAGCAAAAAAAC
CAGGGGGGGTTGAACGCGGGCGCAACTGGGGGAGCTATGTTTGGCGTAGG
CCAAGCCGGCGGACACCAGCAACAACCTCAGGGCATGGGCGTGGCCACGA
ACGGTTCGGGGTTTGCTGGGCTGCGCGGGGGGGGCGAAGGGGCTGCTCAA
GGCAACGGCGCGACGGTAGTGATGCCCGGCGGCTTCGGAGCGGGGGCGGG
CGGCATGGGAATGGGGGGGCTGCGGTAACGAAGCCCAATTGCTACCCGTG
GGTGTTGGGGCTAGTGCGGAGGTTTGCGGGCGTTGTGGCTTTGGAGGCCC
GCGAGTTAGAGCGATGTGGAAACCGGCCAGAACCATTCTTGTATGGTGTT
TGTGTAGCCTTGTCCCTTGCGTTGCTTGATTTGACGTTCTTTTTCTTTTC
GCCTGCAGAAAATTGAGTAGTTCGCTGCCGGTGCATGGACGTAACCAATT
GACGTGCCGCCTTGGTGCCGGCGGTTTCGTCTGCCGTGGAAGGACCTTGT
TTTTGTATCTTTGAGGCTCTGTCAACTGGAGCCGCCTTTTGGCTGCGGGC
GGCGCCCTCACCATTTTATGTATATTCATCGTCCTGTTTCCTGTAGCCGT
CGAGTCTTGGCAGTTTGAGCGACGCCAGGCGCCCGGTGTTGTGTGCTACG
CACGGTTGCGTGCTAGCACACTTTGTTGTATGGCACCTTGGTTTTAGCCT
TGAGGGGGTTCGCAATGTGTATCTAAGCTGTGAAGCTGAAAGAAAAGAAG
ACGATTAATTTACCTTCTTCGAGTACGATGGTGGGCAGCACGACCTACTT
TCGGGCCTATTTTTCGAGACTTGAGTAGAGCACGAGCACGCGCTCGAGTT
CAACCGAATCTCAGCCTCGAATCCCAATGAACAGGACCCTTTCCTCTCGT
TGATGCTGCCGGCGTCGTCTCTCCGCCCTTGTACCTCTTTCAACCTGGTA
CCTTGGAATGTACAGATGGAGCTGCTGTATATTGGTGCTGCATTCAACAA
GAAAATATTGTTTCTCTCTGCGGTGCACCCAAATGTGACCTCGTGCGTGA
CCGACGAGCAATACGCACCGCACCAAAACCGTTTGCGTGGCAGAGAGAGG
C
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Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig9846:801..4951+

>mRNA_E_fasciculatus_S2_contig9846.17851.1 ID=mRNA_E_fasciculatus_S2_contig9846.17851.1|Name=mRNA_E_fasciculatus_S2_contig9846.17851.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=1563bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig9846:801..4951+ (Ectocarpus fasciculatus EfasUO2)
ATGTCGGAACAGGCGCTCAGGAAGCGATTGGAGGCCTTGGTCAAGACGGG
AGAGAACCGCTTCTGCGCCGACTGCGGCAAGAGAGAGCCTCGCTGGGCCT
CCGTCAATCTCGGGCTGTTCATATGCCTGGATTGTTCTGGAATCCACCGC
AACTTGGGGGTTCACATCTCGTTTGTTCGGAGCGTCAACCTGGACACTTG
GAAGCCGGCTCAGGTTAAGGGCATGGAAGAGATGGGAAACGAGCGCGCCA
AGGCTCATTTCGAGGCCGAAGTGCCGGCCAGCTACACCGTGCCGCGAGAA
CACGCCACTGTCCGCGAGCGCGAGAAATGGATCCGTGACAAGTACGAGCA
CAGGCGTTTCGTGTCGAGGGATCCCCAGCCTGCTCGGCAGCGGAAACCGG
AGGAGTCTACCGGCTCACGATCTTCGAGGAAGGACAGCGGCGCAACCTCC
TCCAAGTCACCCACGAGAAAGACCGGCAGCAGTAGCAGTAGCCGGGGGGC
GGGGCGAACATCGTCCTCGACCTCCACGGCGCCGTCACCGGCCGCTTCCA
AGTCTGCGTCATCTACCACCACCAGGGTCGTGCCCCGCCTCCAGAAGGCC
GGCACCGGGGCAGTGAAGGCCGCTTCCGCCGCCGCTGCCGCCGCCGCCAC
CGCTCCGGCCGCTGTCCCCGCCCCCGCGGTCGATCTCCTCGACTTCTCGG
AGCCGGCCCCGCCCCAGGCGCCGCCAAGAGCGTCGCCGCCGCCATTGAGG
GCTTCGTCGGCGCCGCCAACGCCACCGGCGGACCCGATGTTCGAATTCTC
GGATTTCCAGTCTGCGCCTTCTTCGTCGTCGGGGGCGACGGTACCGTCGG
CTGCGGCGTCGGTGGGATCCCAGCAGCAGCAGCAGCAGCAGCAGCAGCAG
CAGCCAGCGGCGCAGTTTGGGCAGCAAGGGCAGCAGGAGCAACCGGCGGC
AGGTGCCCCTGGGAAGGCATCCGCCGCGTCGATTTTGTCCATGTTTAACA
GTCCCGCGGCCGGCGGCGGCGTCGCGGGCCGCGGTATGGCGGGGGCTGTT
GGTTCATCCCCTGTAGCGGGGGTGATGAAAACCCCAGAGCTGAACCAAGT
GTCGCAGATGATGTCGACGCTGAACGTCGGGGGCGTCGCGCCGATGGGCT
CCCAGCAGATGGGCATGCCGGGTGCCGGCGGTTGGGCGCAGCAGCAAAAA
CACCAGCCCCAGCAGGCGCAGGCCCAGGCGATGGCGTGGGCCCAGCAACA
GAAGCTCCAGCAGCTGCAGCAACAGCAGCAGCTGCTCCAGCGACAGCAAT
GGCAAATGCAGCAGCAGCAGCAGCAGCAAAAAAACCAGGGGGGGTTGAAC
GCGGGCGCAACTGGGGGAGCTATGTTTGGCGTAGGCCAAGCCGGCGGACA
CCAGCAACAACCTCAGGGCATGGGCGTGGCCACGAACGGTTCGGGGTTTG
CTGGGCTGCGCGGGGGGGGCGAAGGGGCTGCTCAAGGCAACGGCGCGACG
GTAGTGATGCCCGGCGGCTTCGGAGCGGGGGCGGGCGGCATGGGAATGGG
GGGGCTGCGGTAA
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