prot_D-mesarthrocarpus_Contig10135.3.1 (polypeptide) Discosporangium mesarthrocarpum MT17_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-mesarthrocarpus_Contig10135.3.1
Unique Nameprot_D-mesarthrocarpus_Contig10135.3.1
Typepolypeptide
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Sequence length41
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig10135.3.1 vs. uniprot
Match: D8LEI8_ECTSI (Ubiquinol cytochrome c reductase subunit 6 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEI8_ECTSI)

HSP 1 Score: 61.2 bits (147), Expect = 1.900e-11
Identity = 22/31 (70.97%), Postives = 26/31 (83.87%), Query Frame = 0
Query:   10 QACAGRVNAKGFGTCEPWFFDYLKCVDKCVS 40
            +AC  RV +KGFGTCEPWFFDY+ CVDKC +
Sbjct:   31 KACVERVTSKGFGTCEPWFFDYISCVDKCAA 61          
BLAST of mRNA_D-mesarthrocarpus_Contig10135.3.1 vs. uniprot
Match: A0A6H5K2B5_9PHAE (UCR_hinge domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2B5_9PHAE)

HSP 1 Score: 60.1 bits (144), Expect = 5.460e-11
Identity = 22/31 (70.97%), Postives = 26/31 (83.87%), Query Frame = 0
Query:   10 QACAGRVNAKGFGTCEPWFFDYLKCVDKCVS 40
            +AC  RV +KGFGTCEPWFFDY+ CVDKC +
Sbjct:   31 KACVERVISKGFGTCEPWFFDYISCVDKCAA 61          
BLAST of mRNA_D-mesarthrocarpus_Contig10135.3.1 vs. uniprot
Match: A0A482RA26_9ARCH (UCR_hinge domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RA26_9ARCH)

HSP 1 Score: 53.9 bits (128), Expect = 9.700e-8
Identity = 20/30 (66.67%), Postives = 24/30 (80.00%), Query Frame = 0
Query:   10 QACAGRVNAKGFGTCEPWFFDYLKCVDKCV 39
            +AC  R+ AKG G+CEPW FDY +CVDKCV
Sbjct:   39 EACKERIAAKGTGSCEPWAFDYWRCVDKCV 68          
BLAST of mRNA_D-mesarthrocarpus_Contig10135.3.1 vs. uniprot
Match: A0A225V9I9_9STRA (Cytochrome b-c1 n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225V9I9_9STRA)

HSP 1 Score: 50.8 bits (120), Expect = 2.100e-7
Identity = 19/30 (63.33%), Postives = 24/30 (80.00%), Query Frame = 0
Query:   10 QACAGRVNAKGFGTCEPWFFDYLKCVDKCV 39
            QAC  RVNAKG G+C+  +FD+L C+DKCV
Sbjct:   20 QACLDRVNAKGVGSCDGQYFDFLHCIDKCV 49          
BLAST of mRNA_D-mesarthrocarpus_Contig10135.3.1 vs. uniprot
Match: F0XZK5_AURAN (UCR_hinge domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XZK5_AURAN)

HSP 1 Score: 49.3 bits (116), Expect = 9.600e-7
Identity = 17/29 (58.62%), Postives = 23/29 (79.31%), Query Frame = 0
Query:   11 ACAGRVNAKGFGTCEPWFFDYLKCVDKCV 39
            +C  R+ AKG G CEP++FD+LKC+DKC 
Sbjct:   30 SCVDRIEAKGGGDCEPYYFDWLKCLDKCA 58          
BLAST of mRNA_D-mesarthrocarpus_Contig10135.3.1 vs. uniprot
Match: W2IU60_PHYPR (Cytochrome b-c1 complex subunit 6 n=18 Tax=Phytophthora TaxID=4783 RepID=W2IU60_PHYPR)

HSP 1 Score: 46.6 bits (109), Expect = 1.120e-5
Identity = 17/29 (58.62%), Postives = 22/29 (75.86%), Query Frame = 0
Query:   10 QACAGRVNAKGFGTCEPWFFDYLKCVDKC 38
            QAC  RV AKG G+C+  +FD+L C+DKC
Sbjct:   29 QACLDRVKAKGVGSCDGQYFDFLHCIDKC 57          
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig10135.3.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D8LEI8_ECTSI1.900e-1170.97Ubiquinol cytochrome c reductase subunit 6 n=1 Tax... [more]
A0A6H5K2B5_9PHAE5.460e-1170.97UCR_hinge domain-containing protein n=1 Tax=Ectoca... [more]
A0A482RA26_9ARCH9.700e-866.67UCR_hinge domain-containing protein n=1 Tax=archae... [more]
A0A225V9I9_9STRA2.100e-763.33Cytochrome b-c1 n=1 Tax=Phytophthora megakarya Tax... [more]
F0XZK5_AURAN9.600e-758.62UCR_hinge domain-containing protein n=1 Tax=Aureoc... [more]
W2IU60_PHYPR1.120e-558.62Cytochrome b-c1 complex subunit 6 n=18 Tax=Phytoph... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036811Ubiquinol-cytochrome C reductase hinge domain superfamilyGENE3D1.10.287.20coord: 5..41
e-value: 1.7E-6
score: 30.0
IPR036811Ubiquinol-cytochrome C reductase hinge domain superfamilySUPERFAMILY81531Non-heme 11 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)coord: 10..40
IPR023184Ubiquinol-cytochrome C reductase hinge domainPFAMPF02320UCR_hingecoord: 10..40
e-value: 9.0E-7
score: 29.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig10135contigD-mesarthrocarpus_Contig10135:4108..4230 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig10135.3.1mRNA_D-mesarthrocarpus_Contig10135.3.1Discosporangium mesarthrocarpum MT17_79mRNAD-mesarthrocarpus_Contig10135 4108..4230 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-mesarthrocarpus_Contig10135.3.1 ID=prot_D-mesarthrocarpus_Contig10135.3.1|Name=mRNA_D-mesarthrocarpus_Contig10135.3.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=41bp
MPSLFLTFPQACAGRVNAKGFGTCEPWFFDYLKCVDKCVSA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036811Ubol_cytC_Rdtase_hinge_dom_sf
IPR023184Ubol_cytC_Rdtase_hinge_dom