mRNA_D-mesarthrocarpus_Contig10135.3.1 (mRNA) Discosporangium mesarthrocarpum MT17_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_D-mesarthrocarpus_Contig10135.3.1
Unique Name	mRNA_D-mesarthrocarpus_Contig10135.3.1
Type	mRNA
Organism	Discosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)

Homology

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BLAST of mRNA_D-mesarthrocarpus_Contig10135.3.1 vs. uniprot
Match: D8LEI8_ECTSI (Ubiquinol cytochrome c reductase subunit 6 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEI8_ECTSI)

HSP 1 Score: 61.2 bits (147), Expect = 1.900e-11
Identity = 22/31 (70.97%), Postives = 26/31 (83.87%), Query Frame = 1

Query:   28 QACAGRVNAKGFGTCEPWFFDYLKCVDKCVS 120
            +AC  RV +KGFGTCEPWFFDY+ CVDKC +
Sbjct:   31 KACVERVTSKGFGTCEPWFFDYISCVDKCAA 61

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BLAST of mRNA_D-mesarthrocarpus_Contig10135.3.1 vs. uniprot
Match: A0A6H5K2B5_9PHAE (UCR_hinge domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2B5_9PHAE)

HSP 1 Score: 60.1 bits (144), Expect = 5.460e-11
Identity = 22/31 (70.97%), Postives = 26/31 (83.87%), Query Frame = 1

Query:   28 QACAGRVNAKGFGTCEPWFFDYLKCVDKCVS 120
            +AC  RV +KGFGTCEPWFFDY+ CVDKC +
Sbjct:   31 KACVERVISKGFGTCEPWFFDYISCVDKCAA 61

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BLAST of mRNA_D-mesarthrocarpus_Contig10135.3.1 vs. uniprot
Match: A0A482RA26_9ARCH (UCR_hinge domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RA26_9ARCH)

HSP 1 Score: 53.9 bits (128), Expect = 9.700e-8
Identity = 20/30 (66.67%), Postives = 24/30 (80.00%), Query Frame = 1

Query:   28 QACAGRVNAKGFGTCEPWFFDYLKCVDKCV 117
            +AC  R+ AKG G+CEPW FDY +CVDKCV
Sbjct:   39 EACKERIAAKGTGSCEPWAFDYWRCVDKCV 68

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BLAST of mRNA_D-mesarthrocarpus_Contig10135.3.1 vs. uniprot
Match: A0A225V9I9_9STRA (Cytochrome b-c1 n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225V9I9_9STRA)

HSP 1 Score: 50.8 bits (120), Expect = 2.100e-7
Identity = 19/30 (63.33%), Postives = 24/30 (80.00%), Query Frame = 1

Query:   28 QACAGRVNAKGFGTCEPWFFDYLKCVDKCV 117
            QAC  RVNAKG G+C+  +FD+L C+DKCV
Sbjct:   20 QACLDRVNAKGVGSCDGQYFDFLHCIDKCV 49

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BLAST of mRNA_D-mesarthrocarpus_Contig10135.3.1 vs. uniprot
Match: F0XZK5_AURAN (UCR_hinge domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XZK5_AURAN)

HSP 1 Score: 49.3 bits (116), Expect = 9.600e-7
Identity = 17/29 (58.62%), Postives = 23/29 (79.31%), Query Frame = 1

Query:   31 ACAGRVNAKGFGTCEPWFFDYLKCVDKCV 117
            +C  R+ AKG G CEP++FD+LKC+DKC 
Sbjct:   30 SCVDRIEAKGGGDCEPYYFDWLKCLDKCA 58

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BLAST of mRNA_D-mesarthrocarpus_Contig10135.3.1 vs. uniprot
Match: W2IU60_PHYPR (Cytochrome b-c1 complex subunit 6 n=18 Tax=Phytophthora TaxID=4783 RepID=W2IU60_PHYPR)

HSP 1 Score: 46.6 bits (109), Expect = 1.120e-5
Identity = 17/29 (58.62%), Postives = 22/29 (75.86%), Query Frame = 1

Query:   28 QACAGRVNAKGFGTCEPWFFDYLKCVDKC 114
            QAC  RV AKG G+C+  +FD+L C+DKC
Sbjct:   29 QACLDRVKAKGVGSCDGQYFDFLHCIDKC 57

The following BLAST results are available for this feature:

BLAST of mRNA_D-mesarthrocarpus_Contig10135.3.1 vs. uniprot

BLAST of mRNA_D-mesarthrocarpus_Contig10135.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 6

ZOOM

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POSITION

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Match Name	E-value	Identity	Description
D8LEI8_ECTSI	1.900e-11	70.97	Ubiquinol cytochrome c reductase subunit 6 n=1 Tax...	[more]
A0A6H5K2B5_9PHAE	5.460e-11	70.97	UCR_hinge domain-containing protein n=1 Tax=Ectoca...	[more]
A0A482RA26_9ARCH	9.700e-8	66.67	UCR_hinge domain-containing protein n=1 Tax=archae...	[more]
A0A225V9I9_9STRA	2.100e-7	63.33	Cytochrome b-c1 n=1 Tax=Phytophthora megakarya Tax...	[more]
F0XZK5_AURAN	9.600e-7	58.62	UCR_hinge domain-containing protein n=1 Tax=Aureoc...	[more]
W2IU60_PHYPR	1.120e-5	58.62	Cytochrome b-c1 complex subunit 6 n=18 Tax=Phytoph...	[more]