Homology
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| IPR011990 | Tetratricopeptide-like helical domain superfamily | GENE3D | 1.25.40.10 | Tetratricopeptide repeat domain | coord: 332..446
e-value: 1.7E-32
score: 114.3
coord: 249..331
e-value: 1.7E-20
score: 75.1 |
| IPR011990 | Tetratricopeptide-like helical domain superfamily | GENE3D | 1.25.40.10 | Tetratricopeptide repeat domain | coord: 81..243
e-value: 1.5E-19
score: 72.6 |
| IPR002885 | Pentatricopeptide repeat | PFAM | PF13812 | PPR_3 | coord: 175..226
e-value: 8.4E-7
score: 29.0
coord: 237..295
e-value: 4.4E-12
score: 45.9
coord: 306..363
e-value: 1.3E-5
score: 25.1
coord: 374..429
e-value: 5.7E-13
score: 48.7 |
| IPR002885 | Pentatricopeptide repeat | TIGRFAM | TIGR00756 | TIGR00756 | coord: 354..384
e-value: 3.7E-7
score: 27.9
coord: 387..420
e-value: 6.2E-10
score: 36.6
coord: 286..318
e-value: 5.0E-4
score: 18.1
coord: 215..247
e-value: 3.1E-8
score: 31.3
coord: 250..283
e-value: 3.0E-4
score: 18.8 |
| IPR002885 | Pentatricopeptide repeat | PROSITE | PS51375 | PPR | coord: 385..419
score: 11.608074 |
| IPR002885 | Pentatricopeptide repeat | PROSITE | PS51375 | PPR | coord: 213..247
score: 12.408249 |
| IPR002885 | Pentatricopeptide repeat | PROSITE | PS51375 | PPR | coord: 283..317
score: 9.339086 |
| IPR002885 | Pentatricopeptide repeat | PROSITE | PS51375 | PPR | coord: 248..282
score: 11.060009 |
| IPR002885 | Pentatricopeptide repeat | PROSITE | PS51375 | PPR | coord: 350..384
score: 11.947875 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 30..81 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 30..56 |
| None | No IPR available | PANTHER | PTHR47939 | MEMBRANE-ASSOCIATED SALT-INDUCIBLE PROTEIN-LIKE | coord: 155..451
coord: 95..347 |
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_C-australica_Contig_989.7.2 ID=prot_C-australica_Contig_989.7.2|Name=mRNA_C-australica_Contig_989.7.2|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=496bp
MFLISRSKAYARSLVWRSLARAFTTPQLEQSRAGSDQSSLSSHAAYPAST
TGPLDPQERTGLKRGRGASRPALGWTNSRDQRPKWRAQRDLMREIQRLGK
ARRWREVIPMMIRAQERGLELNISVYNAAIAVMNRNNQWREAYKLTAVMH
PDSKKRATTAIHILEALQAHGSPCLQPDLHTYSCLITLSGIAWKLPHALE
LLAMLKESELQPSQVIYNSLIRACGETNSPDMALEFFHEMLQEGIRPCKV
TYGSLLHAYGRQGGAAKAQQLFDGMQQHGLSPNMVHYNSLIMAYGVADLA
SKAVAVYHDLVATGFVPSSHTYTNLLHACSAPSGSWELAVQFFNEIDKPT
LTHYNALIDACGKDGQIELAHKKLKEMKRKGVQPCVVSYSAVIACYVKAG
CMKEAKEVLKDMQADGISPNYVTYNTLMEPVVAACDWKEARRMYLELLSF
GEWTHWSSVKYDYLDLHHCNKGLALAAVRYVLKEMLREGQWLSLT* back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
| Term | Definition |
|---|
| IPR011990 | TPR-like_helical_dom_sf |
| IPR002885 | Pentatricopeptide_repeat |
|