Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 1 |
| Start | 1 |
| Model size | 1620 |
| Hectar predicted targeting category | mitochondrion |
| Exons | 8 |
| Cds size | 1488 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1682588854.9805598-UTR-C-australica_Contig_989:14923..15033 | 1682588854.9805598-UTR-C-australica_Contig_989:14923..15033 | Chrysoparadoxa australica CS_1217 | UTR | C-australica_Contig_989 14924..15033 - |
| 1682588855.0633247-UTR-C-australica_Contig_989:17576..17598 | 1682588855.0633247-UTR-C-australica_Contig_989:17576..17598 | Chrysoparadoxa australica CS_1217 | UTR | C-australica_Contig_989 17577..17598 - |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1682588854.9894345-CDS-C-australica_Contig_989:15033..15300 | 1682588854.9894345-CDS-C-australica_Contig_989:15033..15300 | Chrysoparadoxa australica CS_1217 | CDS | C-australica_Contig_989 15034..15300 - |
| 1682588854.99784-CDS-C-australica_Contig_989:15603..15696 | 1682588854.99784-CDS-C-australica_Contig_989:15603..15696 | Chrysoparadoxa australica CS_1217 | CDS | C-australica_Contig_989 15604..15696 - |
| 1682588855.0062742-CDS-C-australica_Contig_989:15866..16265 | 1682588855.0062742-CDS-C-australica_Contig_989:15866..16265 | Chrysoparadoxa australica CS_1217 | CDS | C-australica_Contig_989 15867..16265 - |
| 1682588855.0149765-CDS-C-australica_Contig_989:16393..16495 | 1682588855.0149765-CDS-C-australica_Contig_989:16393..16495 | Chrysoparadoxa australica CS_1217 | CDS | C-australica_Contig_989 16394..16495 - |
| 1682588855.0243292-CDS-C-australica_Contig_989:16685..16808 | 1682588855.0243292-CDS-C-australica_Contig_989:16685..16808 | Chrysoparadoxa australica CS_1217 | CDS | C-australica_Contig_989 16686..16808 - |
| 1682588855.0342982-CDS-C-australica_Contig_989:16919..17003 | 1682588855.0342982-CDS-C-australica_Contig_989:16919..17003 | Chrysoparadoxa australica CS_1217 | CDS | C-australica_Contig_989 16920..17003 - |
| 1682588855.0437868-CDS-C-australica_Contig_989:17083..17185 | 1682588855.0437868-CDS-C-australica_Contig_989:17083..17185 | Chrysoparadoxa australica CS_1217 | CDS | C-australica_Contig_989 17084..17185 - |
| 1682588855.0556178-CDS-C-australica_Contig_989:17258..17576 | 1682588855.0556178-CDS-C-australica_Contig_989:17258..17576 | Chrysoparadoxa australica CS_1217 | CDS | C-australica_Contig_989 17259..17576 - |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-australica_Contig_989.7.2 >prot_C-australica_Contig_989.7.2 ID=prot_C-australica_Contig_989.7.2|Name=mRNA_C-australica_Contig_989.7.2|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=496bp
MFLISRSKAYARSLVWRSLARAFTTPQLEQSRAGSDQSSLSSHAAYPAST
TGPLDPQERTGLKRGRGASRPALGWTNSRDQRPKWRAQRDLMREIQRLGK
ARRWREVIPMMIRAQERGLELNISVYNAAIAVMNRNNQWREAYKLTAVMH
PDSKKRATTAIHILEALQAHGSPCLQPDLHTYSCLITLSGIAWKLPHALE
LLAMLKESELQPSQVIYNSLIRACGETNSPDMALEFFHEMLQEGIRPCKV
TYGSLLHAYGRQGGAAKAQQLFDGMQQHGLSPNMVHYNSLIMAYGVADLA
SKAVAVYHDLVATGFVPSSHTYTNLLHACSAPSGSWELAVQFFNEIDKPT
LTHYNALIDACGKDGQIELAHKKLKEMKRKGVQPCVVSYSAVIACYVKAG
CMKEAKEVLKDMQADGISPNYVTYNTLMEPVVAACDWKEARRMYLELLSF
GEWTHWSSVKYDYLDLHHCNKGLALAAVRYVLKEMLREGQWLSLT* back to topmRNA from alignment at C-australica_Contig_989:14924..17598- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_C-australica_Contig_989.7.2 ID=mRNA_C-australica_Contig_989.7.2|Name=mRNA_C-australica_Contig_989.7.2|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=2675bp|location=Sequence derived from alignment at C-australica_Contig_989:14924..17598- (Chrysoparadoxa australica CS_1217)
CCTTACGCATACCGCGCATCGCATGTTTTTGATTAGTCGGAGCAAGGCTT
ATGCCCGTTCCCTGGTTTGGAGAAGTCTAGCTCGTGCCTTCACCACCCCA
CAGCTCGAGCAGAGCAGAGCTGGAAGCGATCAAAGCAGCTTAAGCTCTCA
TGCCGCTTATCCTGCGTCGACTACGGGACCCTTGGACCCACAGGAGAGAA
CGGGCTTGAAGCGCGGCAGAGGAGCTTCTAGACCAGCCCTTGGGTGGACG
AACAGCAGGGATCAGAGGCCAAAGTGGCGGGCGCAGAGAGACTTAATGCG
GGAGATACAGAGACTGGGAAAGGCTAGAAGATGGAGGGAGGTAAGCTAGA
AGCAGAGGCATGGGCCATTCCTCTTCCTCCTTGTTCAATGATACGTGTAT
CTCTCCTCTTCAGGTGATACCAATGATGATCAGGGCTCAAGAAAGAGGGT
TAGAACTTAATATCAGCGTATACAATGCTGCCATTGCAGTCATGAATCGG
AATAATCAATGGAGGGTAGAGTTAACACATGACTTGCGTCTCAGCTGGCT
CCATCTCATCCCATCCCATCCCATCTCTGCATCACTCTTTCTTAGGAGGC
ATACAAACTGACTGCAGTTATGCATCCTGATAGCAAGAAGCGTGCAACCA
CAGCAATACACATTCTCGAAGCACTGCAGGTGGTAACTAATCGCTGACAC
CTTGACATCTAGTCTCTTCTCTCTCTCCATCCACCCCCTCTTGCTCACCT
AACTCAGCACCCGCTGACCCTTTCCTTTCTCCACATCAAGGCCCATGGCA
GCCCATGTCTCCAACCAGACCTTCATACCTACAGCTGCTTGATAACCCTG
TCTGGGATAGCGTGGAAGCTTCCCCACGCATTGGAATTGTTAGCCATGCT
AAAAGAGTCGGAGGTGGCTGCATCTCGCACATCTCAAACATGTCACCTAG
ACGATGACTTGCAACACCCTGTAGTTTGACCACACCCTGCTGCTGTTGTT
GCTATTCCTGCCCGCTTAATTACTTTCACCGGCCTCACCGCCCCCAGCCC
TTCCATGTACTAAACAAACCTCTTCACATTCACATTTACCTTGACCATAC
CAGTTGCAGCCAAGTCAAGTCATCTACAATTCACTTATTAGAGCCTGTGG
CGAGACAAACTCGCCTGACATGGCATTAGAGTTCTTTCACGAGATGCTCC
AGGAGGTACTCCTCATTCAAGTTGTAGTTGTCATCCCCCAGTAGTATCCT
AGTAGTGACCTAGTAGTAGACTGATCACGCTGCCTTTGGCATGGCATGCC
ATTTAACTCACCCCTACACTGGCATTATATCAGGGCATACGACCATGTAA
AGTAACGTATGGCAGCTTGCTACACGCCTATGGGCGGCAAGGAGGAGCTG
CAAAGGCCCAGCAGCTGTTTGATGGCATGCAGCAGCATGGGCTATCCCCC
AACATGGTCCACTACAACAGCCTGATAATGGCTTATGGAGTGGCTGACCT
AGCCAGCAAGGCAGTGGCAGTATACCATGATTTGGTTGCCACAGGCTTTG
TGCCCTCCTCGCATACGTACACCAACCTGCTTCATGCATGTAGCGCGCCA
AGTGGTAGCTGGGAGCTGGCAGTACAGTTCTTTAATGAGATTGACAAGCC
AACGCTTACCCACTACAATGCATTGATTGACGCCTGTGGCAAAGACGGCC
AGATTGAGCTCGCGCATAAGAAGCTAAAGGAGGTGGGTCTTTGCTTAAGT
TTTGTCTCTTGCTTCCGCATTTATTTTGTCTTGCATCTGACCATGTCATT
GAAAGGATGCTATCATCAACCATACTGCTGTAGCTAGTGAGTTATGCGAG
TTAGTTATTCCAGGTGCCTGACCCGCTCTCCTTACTCCTTCCTGGTTGTC
AGATGAAGAGAAAAGGTGTCCAACCATGTGTTGTTTCTTACAGTGCTGTT
ATTGCATGTTACGTCAAAGCTGGGTGTATGAAGGAAGCTAAGGAGGTAAC
ATTGAGAGTGTAGTGAATGGAGGAGGTGATGAGAACATGGTTTGCATGAT
ATAGACTGAATCAAAGTTGATATAATTAGGCACTGGAAAATAGGGGTTGG
CTTACACTCCCACTACTCTCCTTTTGATATCATGTGGCCTGGGTCCTGCT
GCGGCTTTATGTATCATCTTACATACGCTGATGCCAAACATTGTCCTTGT
CCATTTGCATTGCGATAGACTGCTGGTAAAGCGCAGCTCTTTGCTGTATG
CTGCATCCTGCCTCAGCAATCATGACCTAGTTACTCTGTATGCCTCAGGT
GCTTAAGGATATGCAGGCAGATGGCATCTCACCAAATTATGTCACGTACA
ACACTCTCATGGAGCCTGTCGTTGCAGCCTGTGATTGGAAGGAAGCAAGA
AGGATGTATTTGGAGCTGCTGTCATTCGGAGAGTGGACTCATTGGAGCTC
GGTCAAGTATGATTATCTTGACTTGCACCATTGCAACAAGGGTTTGGCAC
TTGCTGCTGTGAGATATGTCTTGAAGGAGATGTTAAGAGAAGGTCAGTGG
CTCTCACTTACATGACCTTACTTGGCCTCTACTACCACTTGTACCACTGT
ATTGTCACACCAGGGAAAAGCATTGATTCAATTAGGCATGACCCAAGGTC
AGATCTCGTCATCATAACTGGCAGC back to topCoding sequence (CDS) from alignment at C-australica_Contig_989:14924..17598- >mRNA_C-australica_Contig_989.7.2 ID=mRNA_C-australica_Contig_989.7.2|Name=mRNA_C-australica_Contig_989.7.2|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=1488bp|location=Sequence derived from alignment at C-australica_Contig_989:14924..17598- (Chrysoparadoxa australica CS_1217)
ATGTTTTTGATTAGTCGGAGCAAGGCTTATGCCCGTTCCCTGGTTTGGAG
AAGTCTAGCTCGTGCCTTCACCACCCCACAGCTCGAGCAGAGCAGAGCTG
GAAGCGATCAAAGCAGCTTAAGCTCTCATGCCGCTTATCCTGCGTCGACT
ACGGGACCCTTGGACCCACAGGAGAGAACGGGCTTGAAGCGCGGCAGAGG
AGCTTCTAGACCAGCCCTTGGGTGGACGAACAGCAGGGATCAGAGGCCAA
AGTGGCGGGCGCAGAGAGACTTAATGCGGGAGATACAGAGACTGGGAAAG
GCTAGAAGATGGAGGGAGGTGATACCAATGATGATCAGGGCTCAAGAAAG
AGGGTTAGAACTTAATATCAGCGTATACAATGCTGCCATTGCAGTCATGA
ATCGGAATAATCAATGGAGGGAGGCATACAAACTGACTGCAGTTATGCAT
CCTGATAGCAAGAAGCGTGCAACCACAGCAATACACATTCTCGAAGCACT
GCAGGCCCATGGCAGCCCATGTCTCCAACCAGACCTTCATACCTACAGCT
GCTTGATAACCCTGTCTGGGATAGCGTGGAAGCTTCCCCACGCATTGGAA
TTGTTAGCCATGCTAAAAGAGTCGGAGTTGCAGCCAAGTCAAGTCATCTA
CAATTCACTTATTAGAGCCTGTGGCGAGACAAACTCGCCTGACATGGCAT
TAGAGTTCTTTCACGAGATGCTCCAGGAGGGCATACGACCATGTAAAGTA
ACGTATGGCAGCTTGCTACACGCCTATGGGCGGCAAGGAGGAGCTGCAAA
GGCCCAGCAGCTGTTTGATGGCATGCAGCAGCATGGGCTATCCCCCAACA
TGGTCCACTACAACAGCCTGATAATGGCTTATGGAGTGGCTGACCTAGCC
AGCAAGGCAGTGGCAGTATACCATGATTTGGTTGCCACAGGCTTTGTGCC
CTCCTCGCATACGTACACCAACCTGCTTCATGCATGTAGCGCGCCAAGTG
GTAGCTGGGAGCTGGCAGTACAGTTCTTTAATGAGATTGACAAGCCAACG
CTTACCCACTACAATGCATTGATTGACGCCTGTGGCAAAGACGGCCAGAT
TGAGCTCGCGCATAAGAAGCTAAAGGAGATGAAGAGAAAAGGTGTCCAAC
CATGTGTTGTTTCTTACAGTGCTGTTATTGCATGTTACGTCAAAGCTGGG
TGTATGAAGGAAGCTAAGGAGGTGCTTAAGGATATGCAGGCAGATGGCAT
CTCACCAAATTATGTCACGTACAACACTCTCATGGAGCCTGTCGTTGCAG
CCTGTGATTGGAAGGAAGCAAGAAGGATGTATTTGGAGCTGCTGTCATTC
GGAGAGTGGACTCATTGGAGCTCGGTCAAGTATGATTATCTTGACTTGCA
CCATTGCAACAAGGGTTTGGCACTTGCTGCTGTGAGATATGTCTTGAAGG
AGATGTTAAGAGAAGGTCAGTGGCTCTCACTTACATGA back to top
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